HG10001507 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001507
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mitochondrial 28S Ribosomal protein
Location	Chr09: 17670504 .. 17672342 (-)
RNA-Seq Expression	HG10001507
Synteny	HG10001507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTATCTTCTAGCTTTATCAGAAGCTTCAGCACCTCTTCGCCCTCGACCTCCTCTTCGAACCCCAATGCCTCGCCTGCTTCGAGTAAAAAGAAACGGAGGAAGAAGAAGAACCTGTTCGAAGTTGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCACGTCGCCAAGGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGGTTTGTTTTCATCTGGTTTCTTTTCCTAGATGTGTGTTGCGGTTCATTGGAGAACAATCTCCCTCTATAATCTGCAGAAAATTTGAAACAAATGGTATTCAGTTTCTGCCAGTGGTTACCATTTCTTGTATGCATTCAAGTAAATTGAAAGGTTGAGGGGTTTTAAAGGATTTGTTTCGGGCAAAAGATCAGTGAGGTTGCTTAATTTCATTAATCGTTTCAAAGATTTGCAGAATGTTAGGGAGGAGTTTGACGATTTTCTTAATGACAATTGATAATCAAACAGGAAGTGTAACAATCTGTTTTCTTTTGGGGCAATCTGATTGAGGGTTTAAGTTTTTCTTTTGGCTTTTTTCTACAGAGTGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGTTAGTGATTCTATATCACGAAATTAGTTTCTCAATCGTTATTGGAATTTCATTTTAGTTTTTATTTCACCATGTTGCTGAAATTTTGTTCTGATATTTGTATAGAAGAATGAGCAACAATTGAATCTCTTATATGATCTTTTCACCTAGGCTAAATTTCATAAATTGGGACCATGACATCAAGAATTAATGCTTCATAGTCGATTTAGGGCTAGTTTGAATTGACTTTCTAAGTGTTTAAGAAGTGTTTGTGAGTGCAAAAAAAATGTTTATAAACACTTAGAAAATCAATCCAAACGGCCCTTAGATGCATGATTGGAAAAAATGGAAGTCTGAGCATTATTCAATATTCACTATGTACCAATCTTCGCACTTGGTGTATAGGATCATGACAATATAGGTCTTGTTTATAACGATTTTGTTTTTAGTTTTTGAAATTATTGCTTGTTCCTCTCAATTTCTAGATGATTTTCACCTTTCTTAAAGAAAAACATGAATTTTTAGTTAAATTCTAAATAATAATAACAATTTAAAAATAAAAAAATATATTTTTTCTTTTAGTTTCGAAAATCTTAGCTTTGGTTTTTGAAAATATTAGTAGAAAGTGGATAACAAAACAAAGAAACTAGTCTTAATTTTCAAACAAGGCATTAGTTATTGTATTCTTATAAATAGTTTACAAGTATTCAAGTTTGGACTTTTGAGGTATAAGGTCCTGAAAGCTTAAGCTGGAGTTAGGTCAGGTAACTCAGCCCTCTTTAGATTGGTCCCTTTTGAAGTCTTTACTGAGGCAACTCCGGACTTGGTAATTGATATAGCCAACCCCTATTAAGTTGCTTCAAATGAATGTTAAAATTCCCTTTTGAAGTCTCTATTGAGGCAACTCCGGACTTAGTAATTGACATAGCCAACCATTATTGTATTGCTTCAAATGAATGTTAAAACTTGAGTTTCTATCAACTCAAATTTCTGTATGTTATTGTTGCCTTTTGCAATCTACTTTCATCAATGACGGGTTGAATAATGTTACAAAAATTTTCCAGGCACGCCCATTGCTGAAGCTCCAAAGAAAATTAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGTTCGGGAGAAAGCAACGCATCAGCTGAACTTCAAACTTCATGA

mRNA sequence

ATGGCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTATCTTCTAGCTTTATCAGAAGCTTCAGCACCTCTTCGCCCTCGACCTCCTCTTCGAACCCCAATGCCTCGCCTGCTTCGAGTAAAAAGAAACGGAGGAAGAAGAAGAACCTGTTCGAAGTTGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCACGTCGCCAAGGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGAGTGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGCACGCCCATTGCTGAAGCTCCAAAGAAAATTAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGTTCGGGAGAAAGCAACGCATCAGCTGAACTTCAAACTTCATGA

Coding sequence (CDS)

ATGGCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTATCTTCTAGCTTTATCAGAAGCTTCAGCACCTCTTCGCCCTCGACCTCCTCTTCGAACCCCAATGCCTCGCCTGCTTCGAGTAAAAAGAAACGGAGGAAGAAGAAGAACCTGTTCGAAGTTGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCACGTCGCCAAGGCTCACTGGGATGAAATATCGTACCAGATCACCAAAATCAATCTGTACAAGAGTGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAGATGGCACGCCCATTGCTGAAGCTCCAAAGAAAATTAGCGGAGTTCACAAGCGCTGTTGGAAGTATATCGCTAGCTTGCCGAGTTCGGGAGAAAGCAACGCATCAGCTGAACTTCAAACTTCATGA

Protein sequence

MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSKKKRRKKKNLFEVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPSSGESNASAELQTS

Homology

[Close]

BLAST of HG10001507 vs. NCBI nr
Match: XP_038900676.1 (uncharacterized protein LOC120087826 [Benincasa hispida])

HSP 1 Score: 260.4 bits (664), Expect = 9.3e-66
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 3   VANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSKKKRR-KKKNLFEVVQF 62
           VANRTAISRALDFSRLSS+FIR+FSTSSPSTSSSNPNAS AS+K KRR KKKNLFEVVQF
Sbjct: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63

Query: 63  LPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 122
           LPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHKDGTPIAEAPKKISGVHKR
Sbjct: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123

Query: 123 CWKYIASLPSSGESNASAELQTS 145
           CWKYIASLP SGESN SAE+QTS
Sbjct: 124 CWKYIASLPRSGESNPSAEVQTS 146

[Close]

BLAST of HG10001507 vs. NCBI nr
Match: XP_004143137.1 (uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical protein Csa_020646 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 3.5e-65
Identity = 130/145 (89.66%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           MAVANRTAISRALDFSRLSSSF+R+FS+SSPSTSSSNPNASP SS+ K+R+KKKNLFEVV
Sbjct: 1   MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+GTPI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP SGES  SAE+QTS
Sbjct: 121 KRCWKYIASLPHSGESKTSAEVQTS 145

[Close]

BLAST of HG10001507 vs. NCBI nr
Match: XP_008464074.1 (PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 uncharacterized protein E6C27_scaffold89G001010 [Cucumis melo var. makuwa] >TYK15394.1 uncharacterized protein E5676_scaffold571G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           MAVANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNASP+SS+ K+R+KKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP  GES  SAE+QTS
Sbjct: 121 KRCWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of HG10001507 vs. NCBI nr
Match: XP_022944512.1 (uncharacterized protein LOC111448948 [Cucurbita moschata])

HSP 1 Score: 240.7 bits (613), Expect = 7.6e-60
Identity = 122/145 (84.14%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           M+VANR+AIS AL FSRLSSSF RSF+TSSPS S+ NPNA  AS+K K+R+KKKNLFEVV
Sbjct: 1   MSVANRSAISGALHFSRLSSSFTRSFTTSSPSPSTPNPNAPTASTKTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITK+NLYKSGTHGKAWG+AHKDGT IAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKLNLYKSGTHGKAWGVAHKDGTRIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP SG+S+ SAE+QTS
Sbjct: 121 KRCWKYIASLPRSGDSDPSAEVQTS 145

[Close]

BLAST of HG10001507 vs. NCBI nr
Match: XP_023532313.1 (uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-58
Identity = 125/156 (80.13%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSKKKRR-KKKNLFEVV 60
           MAVANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRR KKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPSS-----------GESNASAELQTS 145
           KRCWKYI SLP S           GESN SAE QTS
Sbjct: 121 KRCWKYIPSLPRSSENEPTTMTNLGESNPSAEAQTS 156

[Close]

BLAST of HG10001507 vs. ExPASy TrEMBL
Match: A0A0A0KH76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 130/145 (89.66%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           MAVANRTAISRALDFSRLSSSF+R+FS+SSPSTSSSNPNASP SS+ K+R+KKKNLFEVV
Sbjct: 1   MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+GTPI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP SGES  SAE+QTS
Sbjct: 121 KRCWKYIASLPHSGESKTSAEVQTS 145

[Close]

BLAST of HG10001507 vs. ExPASy TrEMBL
Match: A0A5A7V0Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00360 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.2e-64
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           MAVANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNASP+SS+ K+R+KKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP  GES  SAE+QTS
Sbjct: 121 KRCWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of HG10001507 vs. ExPASy TrEMBL
Match: A0A1S3CKN2 (uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.2e-64
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           MAVANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNASP+SS+ K+R+KKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP  GES  SAE+QTS
Sbjct: 121 KRCWKYIASLPRLGESKTSAEVQTS 145

[Close]

BLAST of HG10001507 vs. ExPASy TrEMBL
Match: A0A6J1FVV3 (uncharacterized protein LOC111448948 OS=Cucurbita moschata OX=3662 GN=LOC111448948 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.7e-60
Identity = 122/145 (84.14%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSK-KKRRKKKNLFEVV 60
           M+VANR+AIS AL FSRLSSSF RSF+TSSPS S+ NPNA  AS+K K+R+KKKNLFEVV
Sbjct: 1   MSVANRSAISGALHFSRLSSSFTRSFTTSSPSPSTPNPNAPTASTKTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITK+NLYKSGTHGKAWG+AHKDGT IAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKLNLYKSGTHGKAWGVAHKDGTRIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPSSGESNASAELQTS 145
           KRCWKYIASLP SG+S+ SAE+QTS
Sbjct: 121 KRCWKYIASLPRSGDSDPSAEVQTS 145

[Close]

BLAST of HG10001507 vs. ExPASy TrEMBL
Match: A0A6J1KZ28 (uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/156 (80.13%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MAVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSKKKRR-KKKNLFEVV 60
           MAVANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRR KKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPSS-----------GESNASAELQTS 145
           KRCWKYI SL  S           GESN SAE+QTS
Sbjct: 121 KRCWKYIPSLSRSSENEPTTMTNLGESNPSAEVQTS 156

[Close]

BLAST of HG10001507 vs. TAIR 10
Match: AT5G52370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-41
Identity = 89/146 (60.96%), Postives = 107/146 (73.29%), Query Frame = 0


Query: 1   MAVANRTAISR--ALDFSRLSSSFIRSFSTSSPSTSSSNPNASPASSKKKRRKKKNLFEV 60
           M + NR AISR   +   RLS + +R+FS    + +S NP++   SSK KRRKKKNL EV
Sbjct: 3   MTLINR-AISRTETVGAFRLSLNLLRNFSA---APASENPSSD--SSKPKRRKKKNLIEV 62

Query: 61  VQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGV 120
            QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKISGV
Sbjct: 63  AQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGV 122

Query: 121 HKRCWKYIASLPSSGESNASAELQTS 145
           HKRCWKYI +L  +  +  SA +Q +
Sbjct: 123 HKRCWKYIPNLSKTAPATTSAHVQAA 142

[Close]

BLAST of HG10001507 vs. TAIR 10
Match: AT5G58990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-40
Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 1   MAVANRTAISR--ALDFSRLSSSFIRSFSTS-SPSTSSSNPNASPASSKKKRRKKKNLFE 60
           M + NR AISR   +    LS S +R+FS + S +++ ++ N S  S+K KRRKKKNL E
Sbjct: 3   MTLMNR-AISRTETVGAFSLSLSLLRNFSAAPSAASTPASENPSSDSNKPKRRKKKNLIE 62

Query: 61  VVQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISG 120
           V QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKISG
Sbjct: 63  VAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISG 122

Query: 121 VHKRCWKYIASLPSSGESNASAELQTS 145
           VHKRCWKYI +L  +  +  +A++Q +
Sbjct: 123 VHKRCWKYIPNLSKTTPATTTADVQAA 148

The following BLAST results are available for this feature:

BLAST of HG10001507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900676.1	9.3e-66	93.01	uncharacterized protein LOC120087826 [Benincasa hispida]	[more]
XP_004143137.1	3.5e-65	89.66	uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical ...	[more]
XP_008464074.1	1.5e-63	87.59	PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 unc...	[more]
XP_022944512.1	7.6e-60	84.14	uncharacterized protein LOC111448948 [Cucurbita moschata]	[more]
XP_023532313.1	1.4e-58	80.13	uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10001507 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10001507 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH76	1.7e-65	89.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1	[more]
A0A5A7V0Y6	7.2e-64	87.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKN2	7.2e-64	87.59	uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=...	[more]
A0A6J1FVV3	3.7e-60	84.14	uncharacterized protein LOC111448948 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1KZ28	1.2e-58	80.13	uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023...	[more]

BLAST of HG10001507 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52370.1	3.8e-41	60.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G58990.1	1.1e-40	59.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032053	Mitochondrial 28S ribosomal protein S34	PFAM	PF16053	MRP-S34	coord: 53..126 e-value: 4.3E-11 score: 42.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..43
None	No IPR available	PANTHER	PTHR35316	28S RIBOSOMAL S34 PROTEIN	coord: 3..139
None	No IPR available	PANTHER	PTHR35316:SF1	28S RIBOSOMAL S34 PROTEIN	coord: 3..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001507.1	HG10001507.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003735	structural constituent of ribosome