HG10001497 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001497
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr09: 17592734 .. 17594939 (+)
RNA-Seq Expression	HG10001497
Synteny	HG10001497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTGCTCCATTCGCCCCTTACACAGGGCTGTTTGTCTTCTCAACACCTCCTCATTATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGCAATTACACTGACTCTAAAGATAATTCCATCAAACCGACCCTTCAAACACAGAATTCTTCACACAATATTGTAAACATCCAATTCTTGGTTCAATTACTACGAAATGGGTCTTCTCCGACCCCTCACATTCTCAGTAAAACCATATCCGACTGTACAAAATCTGGCCTTCTGGACTTGGGAATTCAAGTCCATTCAGCCATTGTCAAGCTGGGTTTTTCTCTCAATCCTTATATTTCGAGTGCTCTTGTTCATATGTATGGGAAATGTTGGTCTATCTCGAATGCCCAGAAGGTGTTTGATGAAATGCAATGTCCAAATGTAGTCACTTGGAATTCTTTGGTTACGGGTTATTTGCAAGCTGGCTATCCTTTGATGGCAGTTGATTTGTTTTTAGAGATGTTAAAGAAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCATTTACAAGCTGGAAAGCTTGGAAGTCAACTCCATGGTTTGAGTTTGAAGCTAAGGTTTTCGTCTAATGTTGTTGTTGGTACAGGATTAATTGATATGTACTCAAAGTGTTGCAATCTTGAGGATTCGAGGAGAGTGTTCGATATAATGTCGAACAAGAATGTGTTTCCTTGGACTTCAATGATCTCTGGTTATGCTCGGAATCAGCTACCTAATGAGGCAATGGTTTTGATGAGAGAAATGCTGCATTTGGATATGAAACCAAATGATCTCACTTATAATAGCTTGCTAAGTTCTTTTTCATGTCCTCATCATTTTGATCAATGCAAGCAAATTCATTGTCGGATTATAGCGGAAGGGTTCGAGAGTAATAACTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGTAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTAGAATATCAGACCAGATTTCATGGAATGCAGTCATAGCTGGTTTTTCTAACTTGGGCATTGGTGAGGAAGCTTTGGAATGTTTCATTCAAATGAGGCAGGAAAATATTAGTGTAGACTTTTTCACATTTACAAGCCTTTTTAGGGCCATAGGGATTAGTTCAGCTCTAAAAGAAGGAAAGCAAATTCATGGTCTAGTTTATAAAACTGGATATGCTCTAAATATATTTGTCCAAAATGGTCTTGTGTCAATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGTATTCTCGACAATGAATGAACACGACTTAATATCATGGAATTCATTGCTTTCAGGATGTGCTTACCATGGATGTGGAGAAGAGGCTATCGACTTGTTTGAGCAAATGAGAAGGACATCTATCAAACCAGATAATACCTCCTTCCTTGCTGTGCTCACTGCATGTAGTCATGTTGGTTTGCTGGACAAGGGACTTGAATATTTCAAGTTGATGAGAAATAGTGAATTGCTTGAACCTCCAAAACTGGAGCATTATGCTACAGTAGTCGACCTTTTCGGTCGAGCAGGAAATCTTCAAGAAGCTGAAGCTTTTATTGAAAGCATTCCTATTGAACCAGGGACATCAATTTACAAAGCTTTGCTGAGTGCTTGTCTAATCCATGGGAATAAAGATATTGCCATTCGTACTGCAAAAAAGCTTCTGGAACTATATCCACATGACCCAGCACCTTATATCATGCTGTCAAATGTGTTGGGGAGAGATGGTTATTGGGATGATGCTGCTGGGATAAGGAGGCTAATGTCCAATAGAGGAGTCAAGAAAGATCCTGGTTCCAGTTGGATGTGACTTCATTAAAGGAGAATTTTCAGCATAAGTTATGATCCTACAAGGCCAATGGTTGACAGTTAAACACTTCTAATGAGATTCATAGCTAAACTTCCTCGAAGATCGTTTTATGATTGTCTTTCAGGTCTATTCTCTGGGACAAGGTTCATTCGATACCTGCAAATGTTACTGTGTGGTCAAAGAGTGTTGGCGCTTGGGTTAGTGCCTTTTGGGTGAAGAATTCGACATATACATGATTCCTAGCTCTGTATTTATCCAAAACTAACTTACTGTGTGGTCACAGGGGATTTCACCTAGAGTTATCACTTATTCTATGAGCCTTCCGAGCTACGGTTATTGA

mRNA sequence

ATGTACTGCTCCATTCGCCCCTTACACAGGGCTGTTTGTCTTCTCAACACCTCCTCATTATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGCAATTACACTGACTCTAAAGATAATTCCATCAAACCGACCCTTCAAACACAGAATTCTTCACACAATATTGTAAACATCCAATTCTTGGTTCAATTACTACGAAATGGGTCTTCTCCGACCCCTCACATTCTCAGTAAAACCATATCCGACTGTACAAAATCTGGCCTTCTGGACTTGGGAATTCAAGTCCATTCAGCCATTGTCAAGCTGGGTTTTTCTCTCAATCCTTATATTTCGAGTGCTCTTGTTCATATGTATGGGAAATGTTGGTCTATCTCGAATGCCCAGAAGGTGTTTGATGAAATGCAATGTCCAAATGTAGTCACTTGGAATTCTTTGGTTACGGGTTATTTGCAAGCTGGCTATCCTTTGATGGCAGTTGATTTGTTTTTAGAGATGTTAAAGAAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCATTTACAAGCTGGAAAGCTTGGAAGTCAACTCCATGGTTTGAGTTTGAAGCTAAGGTTTTCGTCTAATGTTGTTGTTGGTACAGGATTAATTGATATGTACTCAAAGTGTTGCAATCTTGAGGATTCGAGGAGAGTGTTCGATATAATGTCGAACAAGAATGTGTTTCCTTGGACTTCAATGATCTCTGGTTATGCTCGGAATCAGCTACCTAATGAGGCAATGGTTTTGATGAGAGAAATGCTGCATTTGGATATGAAACCAAATGATCTCACTTATAATAGCTTGCTAAGTTCTTTTTCATGTCCTCATCATTTTGATCAATGCAAGCAAATTCATTGTCGGATTATAGCGGAAGGGTTCGAGAGTAATAACTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGTAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTAGAATATCAGACCAGATTTCATGGAATGCAGTCATAGCTGGTTTTTCTAACTTGGGCATTGGTGAGGAAGCTTTGGAATGTTTCATTCAAATGAGGCAGGAAAATATTAGTGTAGACTTTTTCACATTTACAAGCCTTTTTAGGGCCATAGGGATTAGTTCAGCTCTAAAAGAAGGAAAGCAAATTCATGGTCTAGTTTATAAAACTGGATATGCTCTAAATATATTTGTCCAAAATGGTCTTGTGTCAATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGGGATTTCACCTAGAGTTATCACTTATTCTATGAGCCTTCCGAGCTACGGTTATTGA

Coding sequence (CDS)

ATGTACTGCTCCATTCGCCCCTTACACAGGGCTGTTTGTCTTCTCAACACCTCCTCATTATCAAACCACGTAAGTTTCAGAGCTTTGATTTCTTGCAATTACACTGACTCTAAAGATAATTCCATCAAACCGACCCTTCAAACACAGAATTCTTCACACAATATTGTAAACATCCAATTCTTGGTTCAATTACTACGAAATGGGTCTTCTCCGACCCCTCACATTCTCAGTAAAACCATATCCGACTGTACAAAATCTGGCCTTCTGGACTTGGGAATTCAAGTCCATTCAGCCATTGTCAAGCTGGGTTTTTCTCTCAATCCTTATATTTCGAGTGCTCTTGTTCATATGTATGGGAAATGTTGGTCTATCTCGAATGCCCAGAAGGTGTTTGATGAAATGCAATGTCCAAATGTAGTCACTTGGAATTCTTTGGTTACGGGTTATTTGCAAGCTGGCTATCCTTTGATGGCAGTTGATTTGTTTTTAGAGATGTTAAAGAAGGGGATTGAACCCACCCCCTTCAGTTTATCTGGTGTTCTTGTGGGCTGCTCTCATTTACAAGCTGGAAAGCTTGGAAGTCAACTCCATGGTTTGAGTTTGAAGCTAAGGTTTTCGTCTAATGTTGTTGTTGGTACAGGATTAATTGATATGTACTCAAAGTGTTGCAATCTTGAGGATTCGAGGAGAGTGTTCGATATAATGTCGAACAAGAATGTGTTTCCTTGGACTTCAATGATCTCTGGTTATGCTCGGAATCAGCTACCTAATGAGGCAATGGTTTTGATGAGAGAAATGCTGCATTTGGATATGAAACCAAATGATCTCACTTATAATAGCTTGCTAAGTTCTTTTTCATGTCCTCATCATTTTGATCAATGCAAGCAAATTCATTGTCGGATTATAGCGGAAGGGTTCGAGAGTAATAACTATATAGCTGCTACCCTTGTTACTGCATATTCAGAATGTTGTAGTAGCTTGGAAGACTATAGGAAGGTTTGCTCAAACATTAGAATATCAGACCAGATTTCATGGAATGCAGTCATAGCTGGTTTTTCTAACTTGGGCATTGGTGAGGAAGCTTTGGAATGTTTCATTCAAATGAGGCAGGAAAATATTAGTGTAGACTTTTTCACATTTACAAGCCTTTTTAGGGCCATAGGGATTAGTTCAGCTCTAAAAGAAGGAAAGCAAATTCATGGTCTAGTTTATAAAACTGGATATGCTCTAAATATATTTGTCCAAAATGGTCTTGTGTCAATGTATGCTAGATGTGGTGCTATCAGTGATTCAAAGAAAGGGATTTCACCTAGAGTTATCACTTATTCTATGAGCCTTCCGAGCTACGGTTATTGA

Protein sequence

MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVSMYARCGAISDSKKGISPRVITYSMSLPSYGY

Homology

[Close]

BLAST of HG10001497 vs. NCBI nr
Match: XP_038902306.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 786.9 bits (2031), Expect = 8.9e-224
Identity = 392/436 (89.91%), Postives = 409/436 (93.81%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQF 60
           MY SIRPLH A+ LL  SS+ NH   RALISCNYTD +D+SIKP+LQTQNSSHNI+ IQF
Sbjct: 1   MYYSIRPLHSALHLLKPSSILNH---RALISCNYTDPEDDSIKPSLQTQNSSHNILKIQF 60

Query: 61  LVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGK 120
           L+QLLRNGS PTPHILSKTISDCTKS LLDLGIQVHSAIVKLGFSLNPYISSALV MYGK
Sbjct: 61  LIQLLRNGSPPTPHILSKTISDCTKSSLLDLGIQVHSAIVKLGFSLNPYISSALVDMYGK 120

Query: 121 CWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGV 180
           CWSISNA KVFDEM CPNVVTWNSLV+GYLQAGYPLMAV LFLEMLKKGIEPTPFSLSGV
Sbjct: 121 CWSISNAHKVFDEMNCPNVVTWNSLVSGYLQAGYPLMAVTLFLEMLKKGIEPTPFSLSGV 180

Query: 181 LVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 240
           LVGCS LQAGKLGSQLHGLSLKLRF SNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV
Sbjct: 181 LVGCSQLQAGKLGSQLHGLSLKLRFLSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 240

Query: 241 FPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCR 300
           F WTSMISGYARNQLP+EAMVL+REMLHLD+KPND+TYNSLLSSFS PHHFDQCKQIHCR
Sbjct: 241 FTWTSMISGYARNQLPHEAMVLIREMLHLDLKPNDMTYNSLLSSFSRPHHFDQCKQIHCR 300

Query: 301 IIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEE 360
           IIAEGFESNNYIA+TLVTAYS CCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI EE
Sbjct: 301 IIAEGFESNNYIASTLVTAYSVCCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGISEE 360

Query: 361 ALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVS 420
           ALECFIQMRQENI VDFFTFTS+FRAIGI+SAL+EGKQIHGLVYKTGYALN+FVQNGLVS
Sbjct: 361 ALECFIQMRQENIDVDFFTFTSIFRAIGITSALEEGKQIHGLVYKTGYALNLFVQNGLVS 420

Query: 421 MYARCGAISDSKKGIS 437
           MYARCGAI DSKK  S
Sbjct: 421 MYARCGAIGDSKKVFS 433

[Close]

BLAST of HG10001497 vs. NCBI nr
Match: XP_023512803.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 756.9 bits (1953), Expect = 9.9e-215
Identity = 376/439 (85.65%), Postives = 402/439 (91.57%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L  S  SNHVSFRALISCN+ D +D+SI+ +LQ  + + N+   V+
Sbjct: 1   MYCSTRPLRSAARFLKASWKSNHVSFRALISCNHEDYEDDSIQSSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILSKTIS CTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+S AQKVFDEMQCPNVVTWNSLVTGYLQAG PLMA+  FLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSKAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYA NQ P+EAMVLMREMLHLD+KPN +TYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYAWNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+IA+GFESNNYIAATLVTAYSECCSSLEDYRKVCSNI+ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIKISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALECFIQMR+ENI VDFFTFTS+FRAIGI SAL+EGKQIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAISDSKK  S
Sbjct: 421 LVSMYARCGAISDSKKVFS 439

[Close]

BLAST of HG10001497 vs. NCBI nr
Match: XP_022986802.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 755.7 bits (1950), Expect = 2.2e-214
Identity = 375/439 (85.42%), Postives = 401/439 (91.34%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L  S  SNHVSFRALISCNY D +D+SI+P+LQ  +   N+   V+
Sbjct: 1   MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILS+TIS CTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+SNAQKVFDEMQCPNVVTWNSLVTGYLQAG PLMA+ LFLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYARNQ P+EAMVLMREMLHLD+KPN +TYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+I +GFESNNYIAATLVTAYSECCSSLEDYRKVCS + ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALE FIQMR+ENI VDFFTFTS+FRAIGI SAL+EG+QIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAISDSKK  S
Sbjct: 421 LVSMYARCGAISDSKKVFS 439

[Close]

BLAST of HG10001497 vs. NCBI nr
Match: KAG6570686.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 755.7 bits (1950), Expect = 2.2e-214
Identity = 375/439 (85.42%), Postives = 400/439 (91.12%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L  S  SNHVSFRALISCN+ D +D+SI+P+LQ  + + N+   V+
Sbjct: 1   MYCSTRPLRSAAHFLKASWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILSKTIS C KSGLLDLGIQVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+SNAQKVFDEMQCPNVVTWNSLVTGYL AG PLMA+  FLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYARNQ P+EAMVLMREMLHLD+KPN +TYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+IA+GFESN YIAATLVTAYSECCSSLEDYRKVCSNI ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALECFIQMR+ENI VDFFTFTS+FRAIGI SAL+EGKQIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAISDSKK  S
Sbjct: 421 LVSMYARCGAISDSKKVFS 439

[Close]

BLAST of HG10001497 vs. NCBI nr
Match: KAG7010533.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 753.4 bits (1944), Expect = 1.1e-213
Identity = 374/439 (85.19%), Postives = 400/439 (91.12%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L TS  SNHVSFRALISCN+ D +D+SI+P+LQ  + + N+   V+
Sbjct: 1   MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILSKTIS C KSGLLDLG+QVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+SNAQKVFDEMQCPNVVTWNSLVTGYL AG  LMA+  FLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYARNQ P+EAMVLMREMLHLD+KPN +TYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+IA+GFESN YIAATLVTAYSECCSSLEDYRKVCSNI ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALECFIQMR+ENI VDFFTFTS+FRAIGI SAL+EGKQIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAISDSKK  S
Sbjct: 421 LVSMYARCGAISDSKKVFS 439

[Close]

BLAST of HG10001497 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-61
Identity = 129/397 (32.49%), Postives = 221/397 (55.67%), Query Frame = 0


Query: 58  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 117
           +QF V++  +   P  +  +  +  C     L +G ++H  +VK GFSL+ +  + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 118 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 177
           Y KC  ++ A+KVFD M   ++V+WN++V GY Q G   MA+++   M ++ ++P+  ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 178 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 237
             VL   S L+   +G ++HG +++  F S V + T L+DMY+KC +LE +R++FD M  
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299

Query: 238 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 297
           +NV  W SMI  Y +N+ P EAM++ ++ML   +KP D++    L + +     ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 298 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 357
           H   +  G + N  +  +L++ Y + C  ++    +   ++    +SWNA+I GF+  G 
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419

Query: 358 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 417
             +AL  F QMR   +  D FT+ S+  AI   S     K IHG+V ++    N+FV   
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479

Query: 418 LVSMYARCGAISDSK---KGISPR-VITYSMSLPSYG 451
           LV MYA+CGAI  ++     +S R V T++  +  YG
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

[Close]

BLAST of HG10001497 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-59
Identity = 123/349 (35.24%), Postives = 199/349 (57.02%), Query Frame = 0


Query: 83  CTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNAQKVFDEMQCPNVVTW 142
           C++    +LG QVH  +VK+G   N  + S+LV+ Y +C  +++A + FD M+  +V++W
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 253

Query: 143 NSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHLQAGKLGSQLHGLSLK 202
            ++++   + G+ + A+ +F+ ML     P  F++  +L  CS  +A + G Q+H L +K
Sbjct: 254 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 313

Query: 203 LRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMISGYARNQLPNEAMVL 262
               ++V VGT L+DMY+KC  + D R+VFD MSN+N   WTS+I+ +AR     EA+ L
Sbjct: 314 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 373

Query: 263 MREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFESNNYIAATLVTAYSE 322
            R M    +  N+LT  S+L +          K++H +II    E N YI +TLV  Y +
Sbjct: 374 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 433

Query: 323 CCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQMRQENISVDFFTFTS 382
           C  S  D   V   +   D +SW A+I+G S+LG   EAL+   +M QE +  + FT++S
Sbjct: 434 CGES-RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 493

Query: 383 LFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVSMYARCGAISDS 432
             +A   S +L  G+ IH +  K     N+FV + L+ MYA+CG +S++
Sbjct: 494 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540

[Close]

BLAST of HG10001497 vs. ExPASy Swiss-Prot
Match: Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-57
Identity = 124/401 (30.92%), Postives = 218/401 (54.36%), Query Frame = 0


Query: 56  VNIQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 115
           V++Q   QL+ +   P  +ILS  +S C+    L+ G Q+H+ I++ G  ++  + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291

Query: 116 HMYGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPF 175
             Y KC  +  A K+F+ M   N+++W +L++GY Q      A++LF  M K G++P  +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351

Query: 176 SLSGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 235
           + S +L  C+ L A   G+Q+H  ++K    ++  V   LIDMY+KC  L D+R+VFDI 
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411

Query: 236 SNKNVFPWTSMISGYARNQLP---NEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFD 295
           +  +V  + +MI GY+R       +EA+ + R+M    ++P+ LT+ SLL + +      
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 296 QCKQIHCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGF 355
             KQIH  +   G   + +  + L+  YS  C  L+D R V   +++ D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531

Query: 356 SNLGIGEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNI 415
                 EEAL  F++++      D FTF ++  A G  ++++ G++ H  + K G   N 
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591

Query: 416 FVQNGLVSMYARCGAISDSKKGI----SPRVITYSMSLPSY 450
           ++ N L+ MYA+CG+  D+ K      S  V+ ++  + SY
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631

[Close]

BLAST of HG10001497 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-55
Identity = 131/378 (34.66%), Postives = 200/378 (52.91%), Query Frame = 0


Query: 70  SPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNAQK 129
           S + ++ +  +S    +  + LG Q+H   +K G      +S+ALV MY KC S++ A K
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277

Query: 130 VFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHLQA 189
           +FD     N +TW+++VTGY Q G  L AV LF  M   GI+P+ +++ GVL  CS +  
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337

Query: 190 GKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMISG 249
            + G QLH   LKL F  ++   T L+DMY+K   L D+R+ FD +  ++V  WTS+ISG
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397

Query: 250 YARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFESN 309
           Y +N    EA++L R M    + PND T  S+L + S     +  KQ+H   I  GF   
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457

Query: 310 NYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQMR 369
             I + L T YS+ C SLED   V       D +SWNA+I+G S+ G G+EALE F +M 
Sbjct: 458 VPIGSALSTMYSK-CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 517

Query: 370 QENISVDFFTFTSLFRAIGISSALKEGKQIHGLVY-KTGYALNIFVQNGLVSMYARCGAI 429
            E +  D  TF ++  A      ++ G     ++  + G    +     +V + +R G +
Sbjct: 518 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 577

Query: 430 SDSKKGISPRVITYSMSL 447
            ++K+ I    I + + L
Sbjct: 578 KEAKEFIESANIDHGLCL 594

[Close]

BLAST of HG10001497 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 2.9e-52
Identity = 117/364 (32.14%), Postives = 191/364 (52.47%), Query Frame = 0


Query: 68  GSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNA 127
           G  PTP+  S  +S C K   L++G Q+H  ++KLGFS + Y+ +ALV +Y    ++ +A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342

Query: 128 QKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHL 187
           + +F  M   + VT+N+L+ G  Q GY   A++LF  M   G+EP   +L+ ++V CS  
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402

Query: 188 QAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMI 247
                G QLH  + KL F+SN  +   L+++Y+KC ++E +   F     +NV  W  M+
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462

Query: 248 SGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFE 307
             Y        +  + R+M   ++ PN  TY S+L +       +  +QIH +II   F+
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522

Query: 308 SNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQ 367
            N Y+ + L+  Y++    L+    +       D +SW  +IAG++     ++AL  F Q
Sbjct: 523 LNAYVCSVLIDMYAK-LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 582

Query: 368 MRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVSMYARCGA 427
           M    I  D    T+   A     ALKEG+QIH     +G++ ++  QN LV++Y+RCG 
Sbjct: 583 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 642

Query: 428 ISDS 432
           I +S
Sbjct: 643 IEES 645

[Close]

BLAST of HG10001497 vs. ExPASy TrEMBL
Match: A0A6J1J8K5 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484444 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.1e-214
Identity = 375/439 (85.42%), Postives = 401/439 (91.34%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L  S  SNHVSFRALISCNY D +D+SI+P+LQ  +   N+   V+
Sbjct: 1   MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILS+TIS CTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+SNAQKVFDEMQCPNVVTWNSLVTGYLQAG PLMA+ LFLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYARNQ P+EAMVLMREMLHLD+KPN +TYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+I +GFESNNYIAATLVTAYSECCSSLEDYRKVCS + ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALE FIQMR+ENI VDFFTFTS+FRAIGI SAL+EG+QIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAISDSKK  S
Sbjct: 421 LVSMYARCGAISDSKKVFS 439

[Close]

BLAST of HG10001497 vs. ExPASy TrEMBL
Match: A0A6J1FYL3 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448803 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.9e-214
Identity = 372/439 (84.74%), Postives = 401/439 (91.34%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNI---VN 60
           MYCS RPL  A   L  S  SNHVSFRALISC++ D +D+ I+P+LQ  + + N+   V+
Sbjct: 1   MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60

Query: 61  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 120
           IQFLVQLLRNGS PTPHILSKTIS C KSGLLDLGIQVHSAIVKLGFSLNPYISSALV M
Sbjct: 61  IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120

Query: 121 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 180
           YGKCWS+SNAQKVFDEMQCPNVVTWNSLVTGYLQAG PLMA+  FLEMLK+GIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180

Query: 181 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 240
           SGVLVGCS LQAGKLG+QLHG+SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMS+
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240

Query: 241 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 300
           KNVF WTSMI+GYARNQ P+EAMVLMREMLHLD+KPN +TYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300

Query: 301 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 360
           HCR+IA+GFES+NYIAATLVTAYSECCSSLEDYRKVCSNI ISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360

Query: 361 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 420
           GEEALECFIQMR+EN+ VDFFTFTS+FRAIGI SAL+EGKQIHGLVYKTGY LN+FVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420

Query: 421 LVSMYARCGAISDSKKGIS 437
           LVSMYARCGAI DSKK  S
Sbjct: 421 LVSMYARCGAIRDSKKVFS 439

[Close]

BLAST of HG10001497 vs. ExPASy TrEMBL
Match: A0A5A7V802 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00240 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.3e-204
Identity = 361/436 (82.80%), Postives = 393/436 (90.14%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQF 60
           MYCSIR LH AV LL  SS  N  + R LISC+YT S+D+SIKP LQT    HN+V++QF
Sbjct: 1   MYCSIRLLHSAVHLLKPSSTLNS-NHRPLISCHYTHSEDDSIKPLLQT----HNVVDLQF 60

Query: 61  LVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGK 120
           LVQLLRNGS PTP IL+KTIS CTKS LLD GIQVHSAI+KLGFSLNPYI +ALV MYGK
Sbjct: 61  LVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALVDMYGK 120

Query: 121 CWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGV 180
           CWSIS+A KVF+EM  P+VV+WNSLVTGYLQAGYPLMAV LFLEMLKKGIEPTPFSLSGV
Sbjct: 121 CWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGV 180

Query: 181 LVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 240
           LV CS LQ G+LGSQLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM NKNV
Sbjct: 181 LVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIMQNKNV 240

Query: 241 FPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCR 300
           F WTSMISGYARNQLP+EAM+LMREMLHLD+KPN +TYNSLL+SFSCP HFDQCKQIHCR
Sbjct: 241 FTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCKQIHCR 300

Query: 301 IIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEE 360
           IIAEGFESNNYIAATLVTAYSEC SSLEDYRK+CSNIR+SDQISWNAVIAGF+NLGIGEE
Sbjct: 301 IIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNLGIGEE 360

Query: 361 ALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVS 420
           ALECFIQMR+EN  VDFFTFTS+F+AIGI+SAL+EGKQIHGLVYKTGYALN+ VQNGLVS
Sbjct: 361 ALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQNGLVS 420

Query: 421 MYARCGAISDSKKGIS 437
           MYARCGAI DSKK  S
Sbjct: 421 MYARCGAIRDSKKVFS 431

[Close]

BLAST of HG10001497 vs. ExPASy TrEMBL
Match: A0A1S3CKQ6 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502059 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.3e-204
Identity = 361/436 (82.80%), Postives = 393/436 (90.14%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQF 60
           MYCSIR LH AV LL  SS  N  + R LISC+YT S+D+SIKP LQT    HN+V++QF
Sbjct: 1   MYCSIRLLHSAVHLLKPSSTLNS-NHRPLISCHYTHSEDDSIKPLLQT----HNVVDLQF 60

Query: 61  LVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGK 120
           LVQLLRNGS PTP IL+KTIS CTKS LLD GIQVHSAI+KLGFSLNPYI +ALV MYGK
Sbjct: 61  LVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALVDMYGK 120

Query: 121 CWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGV 180
           CWSIS+A KVF+EM  P+VV+WNSLVTGYLQAGYPLMAV LFLEMLKKGIEPTPFSLSGV
Sbjct: 121 CWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGV 180

Query: 181 LVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 240
           LV CS LQ G+LGSQLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM NKNV
Sbjct: 181 LVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIMQNKNV 240

Query: 241 FPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCR 300
           F WTSMISGYARNQLP+EAM+LMREMLHLD+KPN +TYNSLL+SFSCP HFDQCKQIHCR
Sbjct: 241 FTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCKQIHCR 300

Query: 301 IIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEE 360
           IIAEGFESNNYIAATLVTAYSEC SSLEDYRK+CSNIR+SDQISWNAVIAGF+NLGIGEE
Sbjct: 301 IIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNLGIGEE 360

Query: 361 ALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVS 420
           ALECFIQMR+EN  VDFFTFTS+F+AIGI+SAL+EGKQIHGLVYKTGYALN+ VQNGLVS
Sbjct: 361 ALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQNGLVS 420

Query: 421 MYARCGAISDSKKGIS 437
           MYARCGAI DSKK  S
Sbjct: 421 MYARCGAIRDSKKVFS 431

[Close]

BLAST of HG10001497 vs. ExPASy TrEMBL
Match: A0A0A0KFD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188690 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.4e-201
Identity = 354/432 (81.94%), Postives = 384/432 (88.89%), Query Frame = 0


Query: 1   MYCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQF 60
           MYC IRP H AV LL  SS+ N  + R LISC+YT S+D SIKP LQT    HN+V+IQF
Sbjct: 1   MYCFIRPFHSAVHLLKPSSILNS-NHRPLISCHYTHSEDVSIKPLLQT----HNVVDIQF 60

Query: 61  LVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGK 120
           LVQLLR+GS PTP IL+KTIS CTKS LLD GIQVHS I+KLGFSLNPYI +ALV MYGK
Sbjct: 61  LVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGK 120

Query: 121 CWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGV 180
           CWSIS+A KVFDEM CP+VVTWNSLVTGYLQAGYPLMAV LFLEMLKKGIEPTPFSLSG 
Sbjct: 121 CWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGG 180

Query: 181 LVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 240
           LVGCS LQ G LGSQLH +SLKLRFSSNVVVGTGLIDMYSKCCNL+DSRRVFDIM NKNV
Sbjct: 181 LVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNV 240

Query: 241 FPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCR 300
           F WTSMISGYARNQLP+EAM+LMREMLHL++KPN +TYNSLLSSFSCP HFD+CKQIHCR
Sbjct: 241 FTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCR 300

Query: 301 IIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEE 360
           II EG+ESNNYIA TLVTAYSECC SLEDYRKVCSNIR+SDQISWNAVIAGF+NLGIGEE
Sbjct: 301 IITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEE 360

Query: 361 ALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVS 420
           ALECFIQMR+E   VDFFTFTS+F+AIG++SAL+EGKQIHGLVYKTGY LN+ VQNGLVS
Sbjct: 361 ALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVS 420

Query: 421 MYARCGAISDSK 433
           MYAR GAI DSK
Sbjct: 421 MYARSGAIRDSK 427

[Close]

BLAST of HG10001497 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-62
Identity = 129/397 (32.49%), Postives = 221/397 (55.67%), Query Frame = 0


Query: 58  IQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHM 117
           +QF V++  +   P  +  +  +  C     L +G ++H  +VK GFSL+ +  + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 118 YGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSL 177
           Y KC  ++ A+KVFD M   ++V+WN++V GY Q G   MA+++   M ++ ++P+  ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 178 SGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSN 237
             VL   S L+   +G ++HG +++  F S V + T L+DMY+KC +LE +R++FD M  
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299

Query: 238 KNVFPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQI 297
           +NV  W SMI  Y +N+ P EAM++ ++ML   +KP D++    L + +     ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 298 HCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGI 357
           H   +  G + N  +  +L++ Y + C  ++    +   ++    +SWNA+I GF+  G 
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419

Query: 358 GEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNG 417
             +AL  F QMR   +  D FT+ S+  AI   S     K IHG+V ++    N+FV   
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479

Query: 418 LVSMYARCGAISDSK---KGISPR-VITYSMSLPSYG 451
           LV MYA+CGAI  ++     +S R V T++  +  YG
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

[Close]

BLAST of HG10001497 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 7.9e-61
Identity = 123/349 (35.24%), Postives = 199/349 (57.02%), Query Frame = 0


Query: 83  CTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNAQKVFDEMQCPNVVTW 142
           C++    +LG QVH  +VK+G   N  + S+LV+ Y +C  +++A + FD M+  +V++W
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 253

Query: 143 NSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHLQAGKLGSQLHGLSLK 202
            ++++   + G+ + A+ +F+ ML     P  F++  +L  CS  +A + G Q+H L +K
Sbjct: 254 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 313

Query: 203 LRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMISGYARNQLPNEAMVL 262
               ++V VGT L+DMY+KC  + D R+VFD MSN+N   WTS+I+ +AR     EA+ L
Sbjct: 314 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 373

Query: 263 MREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFESNNYIAATLVTAYSE 322
            R M    +  N+LT  S+L +          K++H +II    E N YI +TLV  Y +
Sbjct: 374 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 433

Query: 323 CCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQMRQENISVDFFTFTS 382
           C  S  D   V   +   D +SW A+I+G S+LG   EAL+   +M QE +  + FT++S
Sbjct: 434 CGES-RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 493

Query: 383 LFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLVSMYARCGAISDS 432
             +A   S +L  G+ IH +  K     N+FV + L+ MYA+CG +S++
Sbjct: 494 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540

[Close]

BLAST of HG10001497 vs. TAIR 10
Match: AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 2.2e-58
Identity = 124/401 (30.92%), Postives = 218/401 (54.36%), Query Frame = 0


Query: 56  VNIQFLVQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 115
           V++Q   QL+ +   P  +ILS  +S C+    L+ G Q+H+ I++ G  ++  + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291

Query: 116 HMYGKCWSISNAQKVFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPF 175
             Y KC  +  A K+F+ M   N+++W +L++GY Q      A++LF  M K G++P  +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351

Query: 176 SLSGVLVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 235
           + S +L  C+ L A   G+Q+H  ++K    ++  V   LIDMY+KC  L D+R+VFDI 
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411

Query: 236 SNKNVFPWTSMISGYARNQLP---NEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFD 295
           +  +V  + +MI GY+R       +EA+ + R+M    ++P+ LT+ SLL + +      
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 296 QCKQIHCRIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGF 355
             KQIH  +   G   + +  + L+  YS  C  L+D R V   +++ D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531

Query: 356 SNLGIGEEALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNI 415
                 EEAL  F++++      D FTF ++  A G  ++++ G++ H  + K G   N 
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591

Query: 416 FVQNGLVSMYARCGAISDSKKGI----SPRVITYSMSLPSY 450
           ++ N L+ MYA+CG+  D+ K      S  V+ ++  + SY
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631

[Close]

BLAST of HG10001497 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 5.9e-56
Identity = 131/378 (34.66%), Postives = 200/378 (52.91%), Query Frame = 0


Query: 70  SPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKCWSISNAQK 129
           S + ++ +  +S    +  + LG Q+H   +K G      +S+ALV MY KC S++ A K
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277

Query: 130 VFDEMQCPNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGVLVGCSHLQA 189
           +FD     N +TW+++VTGY Q G  L AV LF  M   GI+P+ +++ GVL  CS +  
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337

Query: 190 GKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNVFPWTSMISG 249
            + G QLH   LKL F  ++   T L+DMY+K   L D+R+ FD +  ++V  WTS+ISG
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397

Query: 250 YARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPHHFDQCKQIHCRIIAEGFESN 309
           Y +N    EA++L R M    + PND T  S+L + S     +  KQ+H   I  GF   
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457

Query: 310 NYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGEEALECFIQMR 369
             I + L T YS+ C SLED   V       D +SWNA+I+G S+ G G+EALE F +M 
Sbjct: 458 VPIGSALSTMYSK-CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 517

Query: 370 QENISVDFFTFTSLFRAIGISSALKEGKQIHGLVY-KTGYALNIFVQNGLVSMYARCGAI 429
            E +  D  TF ++  A      ++ G     ++  + G    +     +V + +R G +
Sbjct: 518 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 577

Query: 430 SDSKKGISPRVITYSMSL 447
            ++K+ I    I + + L
Sbjct: 578 KEAKEFIESANIDHGLCL 594

[Close]

BLAST of HG10001497 vs. TAIR 10
Match: AT3G61170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 2.9e-55
Identity = 131/432 (30.32%), Postives = 217/432 (50.23%), Query Frame = 0


Query: 2   YCSIRPLHRAVCLLNTSSLSNHVSFRALISCNYTDSKDNSIKPTLQTQNSSHNIVNIQFL 61
           Y + R L  A  L  ++ + N +S+ ALIS  Y                S   +      
Sbjct: 69  YSNSRRLSDAEKLFRSNPVKNTISWNALIS-GYC--------------KSGSKVEAFNLF 128

Query: 62  VQLLRNGSSPTPHILSKTISDCTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVHMYGKC 121
            ++  +G  P  + L   +  CT   LL  G Q+H   +K GF L+  + + L+ MY +C
Sbjct: 129 WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC 188

Query: 122 WSISNAQKVFDEMQC-PNVVTWNSLVTGYLQAGYPLMAVDLFLEMLKKGIEPTPFSLSGV 181
             IS A+ +F+ M+   N VTW S++TGY Q G+   A++ F ++ ++G +   ++   V
Sbjct: 189 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 248

Query: 182 LVGCSHLQAGKLGSQLHGLSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSNKNV 241
           L  C+ + A ++G Q+H   +K  F +N+ V + LIDMY+KC  +E +R + + M   +V
Sbjct: 249 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 308

Query: 242 FPWTSMISGYARNQLPNEAMVLMREMLHLDMKPNDLTYNSLLSSFSCPH-HFDQCKQIHC 301
             W SMI G  R  L  EA+ +   M   DMK +D T  S+L+ F+            HC
Sbjct: 309 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHC 368

Query: 302 RIIAEGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIRISDQISWNAVIAGFSNLGIGE 361
            I+  G+ +   +   LV  Y++    ++   KV   +   D ISW A++ G ++ G  +
Sbjct: 369 LIVKTGYATYKLVNNALVDMYAK-RGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD 428

Query: 362 EALECFIQMRQENISVDFFTFTSLFRAIGISSALKEGKQIHGLVYKTGYALNIFVQNGLV 421
           EAL+ F  MR   I+ D     S+  A    + L+ G+Q+HG   K+G+  ++ V N LV
Sbjct: 429 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 484

Query: 422 SMYARCGAISDS 432
           +MY +CG++ D+
Sbjct: 489 TMYTKCGSLEDA 484

The following BLAST results are available for this feature:

BLAST of HG10001497 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902306.1	8.9e-224	89.91	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benin...	[more]
XP_023512803.1	9.9e-215	85.65	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur...	[more]
XP_022986802.1	2.2e-214	85.42	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur...	[more]
KAG6570686.1	2.2e-214	85.42	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
KAG7010533.1	1.1e-213	85.19	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of HG10001497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6Q1	2.0e-61	32.49	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q0WNP3	1.1e-59	35.24	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]
Q9SVA5	3.0e-57	30.92	Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX...	[more]
P93005	8.2e-55	34.66	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
Q9SVP7	2.9e-52	32.14	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]

BLAST of HG10001497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8K5	1.1e-214	85.42	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc...	[more]
A0A6J1FYL3	6.9e-214	84.74	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc...	[more]
A0A5A7V802	1.3e-204	82.80	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CKQ6	1.3e-204	82.80	pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis ...	[more]
A0A0A0KFD3	1.4e-201	81.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188690 PE=4 SV=1	[more]

BLAST of HG10001497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11290.1	1.4e-62	32.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18520.1	7.9e-61	35.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G39530.1	2.2e-58	30.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G33680.1	5.9e-56	34.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G61170.1	2.9e-55	30.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 112..135 e-value: 0.22 score: 11.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 343..376 e-value: 1.0E-4 score: 20.2 coord: 243..274 e-value: 5.0E-6 score: 24.3 coord: 140..173 e-value: 1.3E-7 score: 29.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 238..285 e-value: 4.6E-10 score: 39.5 coord: 341..386 e-value: 2.0E-8 score: 34.3 coord: 137..184 e-value: 8.1E-12 score: 45.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..172 score: 12.616514
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 239..273 score: 10.939435
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 9.996763
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 295..449 e-value: 1.7E-12 score: 49.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 197..294 e-value: 5.8E-20 score: 73.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 57..196 e-value: 7.0E-25 score: 90.0
None	No IPR available	PANTHER	PTHR47925:SF24	SUBFAMILY NOT NAMED	coord: 110..433
None	No IPR available	PANTHER	PTHR47925:SF24	SUBFAMILY NOT NAMED	coord: 53..151
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 110..433
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 53..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001497.1	HG10001497.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity