HG10001429 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGTATTTCCAACTGCATCAACGACGCTCGACTTCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCCGAATCCGACGCCGAGTTTATCCGATCCGTCAGCTCTAAGCTCAATAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGACGAGCACGTACCGGAGACGAAGGCCAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCTGCGGACGCCGATGACGGCAGCGGCGGCGATGAGAAGATTAGGAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG ATGGCCTCCGTCTGTATTTCCAACTGCATCAACGACGCTCGACTTCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCCGAATCCGACGCCGAGTTTATCCGATCCGTCAGCTCTAAGCTCAATAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGACGAGCACGTACCGGAGACGAAGGCCAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCTGCGGACGCCGATGACGGCAGCGGCGGCGATGAGAAGATTAGGAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG ATGGCCTCCGTCTGTATTTCCAACTGCATCAACGACGCTCGACTTCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCCGAATCCGACGCCGAGTTTATCCGATCCGTCAGCTCTAAGCTCAATAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGACGAGCACGTACCGGAGACGAAGGCCAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCTGCGGACGCCGATGACGGCAGCGGCGGCGATGAGAAGATTAGGAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH Homology
BLAST of HG10001429 vs. NCBI nr
Match: KAA0035268.1 (uncharacterized protein E6C27_scaffold228G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 268.9 bits (686), Expect = 2.8e-68 Identity = 138/153 (90.20%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of HG10001429 vs. NCBI nr
Match: XP_004148240.1 (uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67 Identity = 139/153 (90.85%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of HG10001429 vs. NCBI nr
Match: XP_038902301.1 (uncharacterized protein LOC120088935 [Benincasa hispida]) HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67 Identity = 138/153 (90.20%), Postives = 142/153 (92.81%), Query Frame = 0
BLAST of HG10001429 vs. NCBI nr
Match: XP_008463974.1 (PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67 Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of HG10001429 vs. NCBI nr
Match: KAE8647064.1 (hypothetical protein Csa_023018 [Cucumis sativus]) HSP 1 Score: 261.2 bits (666), Expect = 5.8e-66 Identity = 137/151 (90.73%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of HG10001429 vs. ExPASy TrEMBL
Match: A0A5A7SXD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00590 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68 Identity = 138/153 (90.20%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of HG10001429 vs. ExPASy TrEMBL
Match: A0A0A0KET2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 139/153 (90.85%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of HG10001429 vs. ExPASy TrEMBL
Match: A0A1S3CKF0 (uncharacterized protein LOC103501967 OS=Cucumis melo OX=3656 GN=LOC103501967 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67 Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of HG10001429 vs. ExPASy TrEMBL
Match: A0A6J1G522 (uncharacterized protein LOC111450987 OS=Cucurbita moschata OX=3662 GN=LOC111450987 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.5e-59 Identity = 130/158 (82.28%), Postives = 138/158 (87.34%), Query Frame = 0
BLAST of HG10001429 vs. ExPASy TrEMBL
Match: A0A6J1L3K0 (uncharacterized protein LOC111499579 OS=Cucurbita maxima OX=3661 GN=LOC111499579 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58 Identity = 130/159 (81.76%), Postives = 136/159 (85.53%), Query Frame = 0
BLAST of HG10001429 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28 Identity = 79/161 (49.07%), Postives = 99/161 (61.49%), Query Frame = 0
BLAST of HG10001429 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17 Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of HG10001429 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 4.2e-14 Identity = 36/75 (48.00%), Postives = 55/75 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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