HG10001409 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001409
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DDB1- and CUL4-associated factor 8
Location	Chr09: 16832534 .. 16835793 (+)
RNA-Seq Expression	HG10001409
Synteny	HG10001409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGAAAAATTTTCTCGGATGAATTCTTGTTACGAAGGGATGAACTGTGAGTTAGCTGAAATTTGCAATAGAGAAATCGGTATTGTTCGATCGAGAAACTTCTCTCGCAGATTCAGTGCTTCAGAGGTTCTTCAAATTTCTACGTTTAATTCTGATCCGATTTTTCCGTTTCATTCTGAATCCATTCAGTGATTGCCTGATTCCTTACTTTTGAATTTCGAGTAGTTAATTAGGTCACTTCTTCGTTCAATTTTCTTCTTAATTATGTTTCGCCTGTTAATGCAACATATCTTATTTACTGAACTCACTGCAGATTATTGTAAAGCAGCTGAATCTTGAAAAGAAGTTAAATGGTCACGATGGCTGTGTAAACGCCGTAGAGTTTAACTCCACTGGCGATCTTCTTGTGTCCGGTTCCGATGACTGCAAAGTCATATTGTGGGATTGGGCAAGAAATTCTGAGAGGTTTTCGTATCCTTCTGGTCACCTCGACAACATATTCCAAACCAAAATTATGCCGTTCACTGATGATCAGAAAATAGTAACTTCAGCTGCAGATGGAAAGGTGATTTTAAATAATATAAAGTGACATATCCTACCATTCATACCATTTTTTGTTGTTGCTTGTGTAGCTGTGTTCATTGGTTTTACCCTCTTTTTTTGCAAAAAATGATAAATTATTCGAGGGGCTGGAATAATGTGGTGGGCGGTTTTATACTGATTTTATACTGATAGATGTAAGAGGGATTTTGAAAATTTGGGGTTTAATGGTGCATACTAGGATTTAGAGGGGAGTCGCTACAATTGGGCGATTATTCGAGGGGATTAAACAATGTGGCAGACAGTTTTATACTGATAGATGTAAGAGGGATTCGAAAATTTGTGGTTTAATGGTGCATCCGAGGATTTAGAGGAGAGTCGCTACAATGTGCCAATTATTTGAGGGGCTGGAATAATGTGGTGGGCGGTTTTATACTGATAGATGTAAGAGGGATTTTGAAAATTTGTAGTTTAATGGTGCGTCCAAGGATTTAGAGGGGGATTGGCTACAATGTGGCAAGCACATTGAATAATTTTCCAGAAAAGGGGTTCTATTACTTTGGTTTTTGTTCATTTCATTTATTTGTGTGCCTTTGGCTTTGTTGTCTTGAGCTTCTCGATTCCCTTTCAACTTAATGGGCTCCGGTTGATGTTGGCTTATAAGATAGTTAAATAATGTGGATTGTTAAGCCTTTGTGAAAGAAATATTTGTAACTTATAATCTTGCCTGATCAGTCCTCAGTGATATGCAACTTTCTTTACCATTAGCTTCCATGCAAAAGTCACTATTATATCATGAATTACATTCTTTCTCATGTCTCCAGCATCGTTTTTTGGTCTATCTTTTGCCTATATTCCCACTCCAGGTTGAGTAAAAAATAACTTAATTATTATGTACGGAGAAAAAGATCAGGTTTTGCTGATGATACTGGCAGATAGAAGACAGAATGGAAGGTGTGTATTGAAAATTAACGTGTTGATGTCTATAAACTATAGAAGAATGATTTGGTTGTACTAGAGCAATTGTTTTGTTCATATTATGTTTTTAGTTTCCATATTGTATAATAATTTGAATTTAAGTATGTGGGGGTATCTGGTTTTGGTCCAACTTGTATTCTCTAATCTTTGAAAAGTTGGGAATACTATCAACTTGAATGATTGTTTTTTTCTCTTTCTCATGCAGGTAAGACTTGGGCAAGTCTTGGGTGATGGCAGAGTTATTACAAAAATGTTGGGGGAGCATCAAGGCTCTGTTCATGAACTTGCTTTGGAGCCTGGAAGTCCATACATACTTTACAGCTGTGGCGAAGACGGTCTTGTTCAGCATGTAAGTGAATCTGCTGTGTGATCCTCCATTGAAGCTTTTTAATTCCATTTGGTGTGGATTACCTTTTTATTCTAATTTCCAGTTTGATTTACGCAATACGTCTGCAAGAAAACTTTTCTGTTGTACCACCTTTGCTGAAAGAAGCAAGCAGCCTCCTAAAAGTGTTGGACTGAATGCCATTGTAATTGACCCAAGAAATCCAAATCACTTTGCATTGGGTGGTTCTGATGAATATGCACGCTTGTACGATTTGCGGAACTACCGAGGTGATGCATTTACAAGTTCGAATAGAGTTCTTGATACTTTCTGCCCTCACCATTTGATCCAAACTAACAATTTCCACATCACGGGAATGGCTTTCTCAAATTCAAGTGAGCTGCTAATAACTTACAGTGACGAGCTTATTTATTTGTTTCAGAAGAATATGGGGCTAGGCCCCTCACCATTGACTGTCTCATCTGAGAATTTGTTGCGGAAACTTAAACGGCCACAGGTTTACTCAGGACACAGAAACTCAGCAACAGTTAAAGGGGTGAATTTCTTTGGCCCCAATGCAGAATATATTGTGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGGAGCTGTACTTGTGAAGTTAATGGTTGGTGATCGTAATGTCGTAAATCATATCGAGCCCCATCCACACCTGCCTATTCTTGCTACGTGTGGCATTGAAAATAATGTAAAGATTTGGACTCCCATGGCTAATGATGTTCCTCCATTGCCTGATGACATTGAACAAGTAAATATCATCTCTCTCATTGGCATTGTCCCTATGGTTCATTTTGTTCTCTCCTTTACTAGAAGTATATTAGAACTTTAGCTTAACTCAAAAGCTTAAGCTGATAGGTTGTAATATATTTAATCTTTTTTACATATTCCTAATGCTCTCTCTAATTAGTTTTGCTACCATTTTTCGTATTCAGTTTCTCTTCTTCTATAATTCGTTCGCTGCCTTTTGCATCGAGAAGAATATATACTAACAAAACTTGCTGGTACTTGATCAGTTGCAAATATCAGGACAAACCATGAATTTTTAAGAAATGAGACATGGAATTTAGAACTTCAGTTTTCCTAGATATCTTATTATACATGCATCATTGACCAGATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCACGGGTGACTCTTACTCCTGATGTTATCATGCATGTCCTGCGCCTGCAAAGAAGACAAGCATCTGCATTTACAGAAAGAAGATACAGTGCGGCCGATATCGACAGCGATGAAGAAAATGAATGGGAAGCATATAATCTAGAAGTCCTAGATGGGAATGTTTCTTTTGAAGAAGATTCCACAGAATATGCTTCTGAGTGTAACATCAGCTAG

mRNA sequence

ATGTGGGAAAAATTTTCTCGGATGAATTCTTGTTACGAAGGGATGAACTGTGAGTTAGCTGAAATTTGCAATAGAGAAATCGGTATTGTTCGATCGAGAAACTTCTCTCGCAGATTCAGTGCTTCAGAGATTATTGTAAAGCAGCTGAATCTTGAAAAGAAGTTAAATGGTCACGATGGCTGTGTAAACGCCGTAGAGTTTAACTCCACTGGCGATCTTCTTGTGTCCGGTTCCGATGACTGCAAAGTCATATTGTGGGATTGGGCAAGAAATTCTGAGAGGTTTTCGTATCCTTCTGGTCACCTCGACAACATATTCCAAACCAAAATTATGCCGTTCACTGATGATCAGAAAATAGTAACTTCAGCTGCAGATGGAAAGGTAAGACTTGGGCAAGTCTTGGGTGATGGCAGAGTTATTACAAAAATGTTGGGGGAGCATCAAGGCTCTGTTCATGAACTTGCTTTGGAGCCTGGAAGTCCATACATACTTTACAGCTGTGGCGAAGACGGTCTTGTTCAGCATTTTGATTTACGCAATACGTCTGCAAGAAAACTTTTCTGTTGTACCACCTTTGCTGAAAGAAGCAAGCAGCCTCCTAAAAGTGTTGGACTGAATGCCATTGTAATTGACCCAAGAAATCCAAATCACTTTGCATTGGGTGGTTCTGATGAATATGCACGCTTGTACGATTTGCGGAACTACCGAGGTGATGCATTTACAAGTTCGAATAGAGTTCTTGATACTTTCTGCCCTCACCATTTGATCCAAACTAACAATTTCCACATCACGGGAATGGCTTTCTCAAATTCAAGTGAGCTGCTAATAACTTACAGTGACGAGCTTATTTATTTGTTTCAGAAGAATATGGGGCTAGGCCCCTCACCATTGACTGTCTCATCTGAGAATTTGTTGCGGAAACTTAAACGGCCACAGGTTTACTCAGGACACAGAAACTCAGCAACAGTTAAAGGGGTGAATTTCTTTGGCCCCAATGCAGAATATATTGTGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGGAGCTGTACTTGTGAAGTTAATGGTTGGTGATCGTAATGTCGTAAATCATATCGAGCCCCATCCACACCTGCCTATTCTTGCTACGTGTGGCATTGAAAATAATGTAAAGATTTGGACTCCCATGGCTAATGATGTTCCTCCATTGCCTGATGACATTGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCACGGGTGACTCTTACTCCTGATGTTATCATGCATGTCCTGCGCCTGCAAAGAAGACAAGCATCTGCATTTACAGAAAGAAGATACAGTGCGGCCGATATCGACAGCGATGAAGAAAATGAATGGGAAGCATATAATCTAGAAGTCCTAGATGGGAATGTTTCTTTTGAAGAAGATTCCACAGAATATGCTTCTGAGTGTAACATCAGCTAG

Coding sequence (CDS)

ATGTGGGAAAAATTTTCTCGGATGAATTCTTGTTACGAAGGGATGAACTGTGAGTTAGCTGAAATTTGCAATAGAGAAATCGGTATTGTTCGATCGAGAAACTTCTCTCGCAGATTCAGTGCTTCAGAGATTATTGTAAAGCAGCTGAATCTTGAAAAGAAGTTAAATGGTCACGATGGCTGTGTAAACGCCGTAGAGTTTAACTCCACTGGCGATCTTCTTGTGTCCGGTTCCGATGACTGCAAAGTCATATTGTGGGATTGGGCAAGAAATTCTGAGAGGTTTTCGTATCCTTCTGGTCACCTCGACAACATATTCCAAACCAAAATTATGCCGTTCACTGATGATCAGAAAATAGTAACTTCAGCTGCAGATGGAAAGGTAAGACTTGGGCAAGTCTTGGGTGATGGCAGAGTTATTACAAAAATGTTGGGGGAGCATCAAGGCTCTGTTCATGAACTTGCTTTGGAGCCTGGAAGTCCATACATACTTTACAGCTGTGGCGAAGACGGTCTTGTTCAGCATTTTGATTTACGCAATACGTCTGCAAGAAAACTTTTCTGTTGTACCACCTTTGCTGAAAGAAGCAAGCAGCCTCCTAAAAGTGTTGGACTGAATGCCATTGTAATTGACCCAAGAAATCCAAATCACTTTGCATTGGGTGGTTCTGATGAATATGCACGCTTGTACGATTTGCGGAACTACCGAGGTGATGCATTTACAAGTTCGAATAGAGTTCTTGATACTTTCTGCCCTCACCATTTGATCCAAACTAACAATTTCCACATCACGGGAATGGCTTTCTCAAATTCAAGTGAGCTGCTAATAACTTACAGTGACGAGCTTATTTATTTGTTTCAGAAGAATATGGGGCTAGGCCCCTCACCATTGACTGTCTCATCTGAGAATTTGTTGCGGAAACTTAAACGGCCACAGGTTTACTCAGGACACAGAAACTCAGCAACAGTTAAAGGGGTGAATTTCTTTGGCCCCAATGCAGAATATATTGTGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGGAGCTGTACTTGTGAAGTTAATGGTTGGTGATCGTAATGTCGTAAATCATATCGAGCCCCATCCACACCTGCCTATTCTTGCTACGTGTGGCATTGAAAATAATGTAAAGATTTGGACTCCCATGGCTAATGATGTTCCTCCATTGCCTGATGACATTGAACAAATAATGGAGTCCAATAGGCAAGGAAGAGAAGACCACTCACGGGTGACTCTTACTCCTGATGTTATCATGCATGTCCTGCGCCTGCAAAGAAGACAAGCATCTGCATTTACAGAAAGAAGATACAGTGCGGCCGATATCGACAGCGATGAAGAAAATGAATGGGAAGCATATAATCTAGAAGTCCTAGATGGGAATGTTTCTTTTGAAGAAGATTCCACAGAATATGCTTCTGAGTGTAACATCAGCTAG

Protein sequence

MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTEYASECNIS

Homology

[Close]

BLAST of HG10001409 vs. NCBI nr
Match: XP_038902691.1 (DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 965.3 bits (2494), Expect = 2.0e-277
Identity = 463/488 (94.88%), Postives = 476/488 (97.54%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MW+KFSRMNSCYEG NCEL EICNREIGI RSRNFSRRF ASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWKKFSRMNSCYEGTNCELVEICNREIGISRSRNFSRRFCASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLGQVLGDGRVITKMLGEHQG VHELA+EPGSP++LYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGPVHELAVEPGSPHMLYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           TS RKLF CTTFAERSKQPPKSV LNAIVIDPRNPN+FALGGSDEYARLYDLRN RGDAF
Sbjct: 181 TSVRKLFYCTTFAERSKQPPKSVELNAIVIDPRNPNYFALGGSDEYARLYDLRNCRGDAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           TSSNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 TSSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLK+PQVY+GHRNSATVKGVNFFGPNAEY+VSGSDCGHIYIWKKKGA LVKLMV
Sbjct: 301 SENLLRKLKQPQVYTGHRNSATVKGVNFFGPNAEYVVSGSDCGHIYIWKKKGAPLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIENNVKIWTPM +DVPPLPDDIE IMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMVSDVPPLPDDIEPIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWE+YNL+VLDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWESYNLQVLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           YASECNIS
Sbjct: 481 YASECNIS 488

[Close]

BLAST of HG10001409 vs. NCBI nr
Match: XP_022986111.1 (DDB1- and CUL4-associated factor 8 [Cucurbita maxima])

HSP 1 Score: 938.3 bits (2424), Expect = 2.6e-269
Identity = 451/488 (92.42%), Postives = 470/488 (96.31%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MWEK SRMNSCY GM+CELAEIC+REIGI RSRNFSRRFSASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWEKLSRMNSCYAGMDCELAEICSREIGIARSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFT+D+KIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDRKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLG+VL DGRV+ KMLGEHQGSVHELA+EPGSP+ILYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGEVLDDGRVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           +SA KLF CT+FAERSKQPPK VGLNAIV DPRNPN+FALGGSDEYARLYDLRN  G AF
Sbjct: 181 SSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           ++SNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 STSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLKRPQVYSGHRNSATVKGVNFFGPN+EY+VSGSDCGHIYIWKKKGAVLVKLMV
Sbjct: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNSEYVVSGSDCGHIYIWKKKGAVLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIE NVKIWTPMA DVPPLPDDIEQIMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDIEQIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSA DI SDEENEWEA NLE LDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEENEWEAQNLEFLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           Y+S+CNIS
Sbjct: 481 YSSDCNIS 488

[Close]

BLAST of HG10001409 vs. NCBI nr
Match: KAG7010600.1 (DDB1- and CUL4-associated factor 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 935.6 bits (2417), Expect = 1.7e-268
Identity = 450/488 (92.21%), Postives = 468/488 (95.90%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MWEK SRMNSCY GM+CELAEIC+REIG  RSRNFSRRFSASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWEKLSRMNSCYAGMDCELAEICSREIGTPRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFT+DQKIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDQKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLGQVL DGRV+ KMLGEHQGSVHELA+EPGSP+ILYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGQVLDDGRVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           +SA KLF CT+FAERSKQPPK VGLNAIV DPRNPN+FALGGSDEYARLYDLRN  G AF
Sbjct: 181 SSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           ++SNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 STSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLKRPQVYSGHRNSATVKGVNFFGPN+EY+VSGSDCGHIYIWKKKGAVLVKLMV
Sbjct: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNSEYVVSGSDCGHIYIWKKKGAVLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIE NVKIWTPMA DVPPLPDD EQIMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDFEQIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSA DI SDE+NEWEA NLE LDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEDNEWEAQNLEFLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           Y+S+CNIS
Sbjct: 481 YSSDCNIS 488

[Close]

BLAST of HG10001409 vs. NCBI nr
Match: XP_038902693.1 (DDB1- and CUL4-associated factor 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 934.9 bits (2415), Expect = 2.9e-268
Identity = 453/488 (92.83%), Postives = 465/488 (95.29%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MW+KFSRMNSCYEG NCEL EICNREIGI RSRNFSRRF ASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWKKFSRMNSCYEGTNCELVEICNREIGISRSRNFSRRFCASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLGQVLGDGRVITKMLGEHQG VHELA+EPGSP++LYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGPVHELAVEPGSPHMLYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           TS RKLF CTTFAERSKQPPKSV LNAIVIDPRNPN+FALGGSDEYARLYDLRN RGDAF
Sbjct: 181 TSVRKLFYCTTFAERSKQPPKSVELNAIVIDPRNPNYFALGGSDEYARLYDLRNCRGDAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           TSSNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 TSSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLK+PQVY+GHRNSATVKGVNFFGPNAEY+VSGSDCGHIYIWKKKGA LVKLMV
Sbjct: 301 SENLLRKLKQPQVYTGHRNSATVKGVNFFGPNAEYVVSGSDCGHIYIWKKKGAPLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIENNVKIWTPM             IMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPM-------------IMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWE+YNL+VLDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWESYNLQVLDGNVSFEEDSTE 475

Query: 481 YASECNIS 489
           YASECNIS
Sbjct: 481 YASECNIS 475

[Close]

BLAST of HG10001409 vs. NCBI nr
Match: XP_022944589.1 (DDB1- and CUL4-associated factor 8 [Cucurbita moschata])

HSP 1 Score: 934.1 bits (2413), Expect = 4.9e-268
Identity = 450/488 (92.21%), Postives = 468/488 (95.90%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MWEK SRMNSCY GM+CELAEIC+REIG  RSRNFSRRFSASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWEKLSRMNSCYAGMDCELAEICSREIGTPRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFT+DQKIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDQKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLGQVL DGRV+ KMLGEHQGSVHELA+EPGSP+ILYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGQVLDDGRVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           +SA KLF CT+FAERSKQPPK VGLNAIV DPRNPN+FALGGSDEYARLYDLRN  G AF
Sbjct: 181 SSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           ++SNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 STSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLKRPQVYSGHRNSATVKGVNFFG N+EY+VSGSDCGHIYIWKKKGAVLVKLMV
Sbjct: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGSNSEYVVSGSDCGHIYIWKKKGAVLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIE NVKIWTPMA DVPPLPDDIEQIMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDIEQIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSA DI SDE+NEWEA NLE LDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEDNEWEAQNLEFLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           Y+S+CNIS
Sbjct: 481 YSSDCNIS 488

[Close]

BLAST of HG10001409 vs. ExPASy Swiss-Prot
Match: Q8N7N5 (DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.8e-85
Identity = 182/448 (40.62%), Postives = 254/448 (56.70%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           L  +  RE+G   S  F      + + V++  L+  L GH GCVN + FN  G  L SGS
Sbjct: 149 LPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGS 208

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD KV++WDW R      + SGH  N+FQ K +P + D  +   A DG+VR+ ++     
Sbjct: 209 DDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQC 268

Query: 139 V-ITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLR-NTSARKLFCCTTFAERS 198
              TK + +H+G+ H+LALEP SP    S GED +V   DLR +  A KL         +
Sbjct: 269 CKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------T 328

Query: 199 KQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLI 258
           K+  K VGL  I ++P N + FA+GG D+Y R+YD R    +    +N VL  FCPHHL+
Sbjct: 329 KEKEKKVGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKIDEN---ENNGVLKKFCPHHLV 388

Query: 259 QT-NNFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVY 318
            + +  +IT + +S + +ELL +Y+DE IYLF  +   G            + +KR   Y
Sbjct: 389 NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG-----------AQYIKR---Y 448

Query: 319 SGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDR-NVVNHIEPHP 378
            GHRN+ATVKGVNF+GP +E++VSGSDCGHI++W+K    +++ M GD+  VVN +EPHP
Sbjct: 449 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 508

Query: 379 HLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPD-----VI 438
           HLP+LAT G++++VKIW P A     L    E I ++ R+  ED    T   D      +
Sbjct: 509 HLPVLATSGLDHDVKIWAPTAEASTELTGLKEVIKKNKRERDEDSLHHTDLFDSHMLWFL 568

Query: 439 MHVLRLQRRQASAFTERRYSAADIDSDE 457
           MH LR QRR    + E    A D DSDE
Sbjct: 569 MHHLR-QRRHHRRWREPGVGATDADSDE 569

[Close]

BLAST of HG10001409 vs. ExPASy Swiss-Prot
Match: Q5TAQ9 (DDB1- and CUL4-associated factor 8 OS=Homo sapiens OX=9606 GN=DCAF8 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.8e-84
Identity = 180/448 (40.18%), Postives = 254/448 (56.70%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           L  +  RE+G   S  F      + + V++  L+  L GH GCVN + FN  G  L SGS
Sbjct: 155 LPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGS 214

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD KV++WDW R      + SGH  N+FQ K +P + D  +   A DG+VR+ ++     
Sbjct: 215 DDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQC 274

Query: 139 V-ITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLR-NTSARKLFCCTTFAERS 198
              TK + +H+G+ H+LALEP SP    S GED +V   DLR +  A KL         +
Sbjct: 275 CKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------T 334

Query: 199 KQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLI 258
           K+  K VGL  I ++P N + FA+GG D++ R+YD R    +    +N VL  FCPHHL+
Sbjct: 335 KEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDEN---ENNGVLKKFCPHHLV 394

Query: 259 QT-NNFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVY 318
            + +  +IT + +S + +ELL +Y+DE IYLF  +   G            + +KR   Y
Sbjct: 395 NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG-----------AQYVKR---Y 454

Query: 319 SGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDR-NVVNHIEPHP 378
            GHRN+ATVKGVNF+GP +E++VSGSDCGHI++W+K    +++ M GD+  VVN +EPHP
Sbjct: 455 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 514

Query: 379 HLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPD-----VI 438
           HLP+LAT G++++VKIW P A     L    + I ++ R+  ED    T   D      +
Sbjct: 515 HLPVLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNKRERDEDSLHQTDLFDSHMLWFL 574

Query: 439 MHVLRLQRRQASAFTERRYSAADIDSDE 457
           MH LR QRR    + E    A D DSDE
Sbjct: 575 MHHLR-QRRHHRRWREPGVGATDADSDE 575

[Close]

BLAST of HG10001409 vs. ExPASy Swiss-Prot
Match: Q5U2M6 (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.8e-84
Identity = 180/448 (40.18%), Postives = 254/448 (56.70%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           L  +  RE+G   S  F      + + V++  L+  L GH GCVN + FN  G  L SGS
Sbjct: 149 LPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGS 208

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD KV++WDW R      + SGH  N+FQ K +P + D  +   A DG+VR+ ++     
Sbjct: 209 DDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQC 268

Query: 139 V-ITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLR-NTSARKLFCCTTFAERS 198
              TK + +H+G+ H+LALEP SP    S GED +V   DLR +  A KL         +
Sbjct: 269 CKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------T 328

Query: 199 KQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLI 258
           K+  K VGL  I ++P N + FA+GG D++ R+YD R    +    +N VL  FCPHHL+
Sbjct: 329 KEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDEN---ENNGVLKKFCPHHLV 388

Query: 259 QT-NNFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVY 318
            + +  +IT + +S + +ELL +Y+DE IYLF  +   G            + +KR   Y
Sbjct: 389 NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG-----------AQYIKR---Y 448

Query: 319 SGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDR-NVVNHIEPHP 378
            GHRN+ATVKGVNF+GP +E++VSGSDCGHI++W+K    +++ M GD+  VVN +EPHP
Sbjct: 449 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 508

Query: 379 HLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPD-----VI 438
           HLP+LAT G++++VKIW P A     L    + I ++ R+  ED    T   D      +
Sbjct: 509 HLPVLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNKRERDEDSLHHTDLFDSHMLWFL 568

Query: 439 MHVLRLQRRQASAFTERRYSAADIDSDE 457
           MH LR QRR    + E    A D DSDE
Sbjct: 569 MHHLR-QRRHHRRWREPGVGATDADSDE 569

[Close]

BLAST of HG10001409 vs. ExPASy Swiss-Prot
Match: Q5R448 (DDB1- and CUL4-associated factor 8 OS=Pongo abelii OX=9601 GN=DCAF8 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.1e-84
Identity = 179/449 (39.87%), Postives = 257/449 (57.24%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           L  +  RE+G   S  F      + + V++  L+  L GH GCVN + FN  G  L SGS
Sbjct: 155 LPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGS 214

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD KV++WDW R      + SGH  N+FQ K +P + D  +   A DG+VR+ ++     
Sbjct: 215 DDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMRARDGQVRVAELSATQC 274

Query: 139 V-ITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLR-NTSARKLFCCTTFAERS 198
              TK + +H+G+ H+LALEP SP    S GED +V   DLR +  A KL         +
Sbjct: 275 CKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVV-------T 334

Query: 199 KQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLI 258
           K+  K VGL  I ++P N + FA+GG D++ R+YD R    +    +N VL  FCPHHL+
Sbjct: 335 KEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDEN---ENNGVLKKFCPHHLV 394

Query: 259 Q-TNNFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVY 318
              +  +IT + +S + +ELL +Y+DE IYLF  +   G            + +KR   Y
Sbjct: 395 NGESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG-----------AQYVKR---Y 454

Query: 319 SGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDR-NVVNHIEPHP 378
            GHRN+ATVKGVNF+GP +E++VSGSDCGHI++W+K    +++ M GD+  VVN +EPHP
Sbjct: 455 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 514

Query: 379 HLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHS--RVTLTPD----V 438
           HLP+LAT G++++VKIW P A     L   ++ +++ N++ R++ S  R  L        
Sbjct: 515 HLPVLATSGLDHDVKIWAPTAEASTEL-TGLKDVIKKNKRERDEDSLHRTDLFDSHMLWF 574

Query: 439 IMHVLRLQRRQASAFTERRYSAADIDSDE 457
           +MH LR QRR    + E    A D DSDE
Sbjct: 575 LMHHLR-QRRHHRRWREPGVGATDADSDE 575

[Close]

BLAST of HG10001409 vs. ExPASy Swiss-Prot
Match: Q6NRH1 (DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.5e-81
Identity = 174/448 (38.84%), Postives = 252/448 (56.25%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           L+ +  R++G   S  F      +   V++ +L   L+GH GCVN + FN  G  L SGS
Sbjct: 158 LSALRQRQMG--SSTRFIYEACGARGFVQRFHLLHGLDGHSGCVNTLHFNQRGTCLASGS 217

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD KV++WDW R      + SGH  N+FQ K +P + D  +   A DG+VR+ ++     
Sbjct: 218 DDLKVVVWDWVRRKPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATHC 277

Query: 139 V-ITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLFCCTTFAERSK 198
              TK + +H+G+ H+LALEP SP    S GED +V   DLR          T      K
Sbjct: 278 CKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVT------K 337

Query: 199 QPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLIQ 258
           +    VGL  I ++P N   FA+GG D++ R+YD R    +    +N VL  FCPHHL+ 
Sbjct: 338 EKESKVGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKINENV---NNGVLKKFCPHHLVT 397

Query: 259 TN-NFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYS 318
           +    +IT + +S + SELL +Y+DE IYLF  +   G              +KR   Y 
Sbjct: 398 SEAKANITCLVYSHDGSELLASYNDEDIYLFNSSHSDG-----------AEYIKR---YK 457

Query: 319 GHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDR-NVVNHIEPHPH 378
           GHRN+ATVKGVNF+GP +E++VSGSDCGHI++W+K    +V+ M GD+  VVN +EPHPH
Sbjct: 458 GHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPH 517

Query: 379 LPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHS--RVTLTPD----VI 438
           LP+LAT G++ +VKIW P A + P   D ++++++ N++ R++ S     L  +     +
Sbjct: 518 LPVLATSGLDYDVKIWLPTAKE-PTELDGLKEVIKKNKRERDEDSLHHTDLFDNHMLWFL 577

Query: 439 MHVLRLQRRQASAFTERRYSAADIDSDE 457
           MH LR QR Q     +    A D +SD+
Sbjct: 578 MHHLR-QRGQRRRRRDAGLGAGDAESDD 578

[Close]

BLAST of HG10001409 vs. ExPASy TrEMBL
Match: A0A6J1JA63 (DDB1- and CUL4-associated factor 8 OS=Cucurbita maxima OX=3661 GN=LOC111483952 PE=4 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.3e-269
Identity = 451/488 (92.42%), Postives = 470/488 (96.31%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MWEK SRMNSCY GM+CELAEIC+REIGI RSRNFSRRFSASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWEKLSRMNSCYAGMDCELAEICSREIGIARSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFT+D+KIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDRKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLG+VL DGRV+ KMLGEHQGSVHELA+EPGSP+ILYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGEVLDDGRVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           +SA KLF CT+FAERSKQPPK VGLNAIV DPRNPN+FALGGSDEYARLYDLRN  G AF
Sbjct: 181 SSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           ++SNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 STSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLKRPQVYSGHRNSATVKGVNFFGPN+EY+VSGSDCGHIYIWKKKGAVLVKLMV
Sbjct: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNSEYVVSGSDCGHIYIWKKKGAVLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIE NVKIWTPMA DVPPLPDDIEQIMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDIEQIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSA DI SDEENEWEA NLE LDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEENEWEAQNLEFLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           Y+S+CNIS
Sbjct: 481 YSSDCNIS 488

[Close]

BLAST of HG10001409 vs. ExPASy TrEMBL
Match: A0A6J1FWZ1 (DDB1- and CUL4-associated factor 8 OS=Cucurbita moschata OX=3662 GN=LOC111449002 PE=4 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.4e-268
Identity = 450/488 (92.21%), Postives = 468/488 (95.90%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           MWEK SRMNSCY GM+CELAEIC+REIG  RSRNFSRRFSASEIIVKQLNLEKKLNGHDG
Sbjct: 1   MWEKLSRMNSCYAGMDCELAEICSREIGTPRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFT+DQKIV
Sbjct: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDQKIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           TSAADGKVRLGQVL DGRV+ KMLGEHQGSVHELA+EPGSP+ILYSCGEDGLVQHFDLRN
Sbjct: 121 TSAADGKVRLGQVLDDGRVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRN 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
           +SA KLF CT+FAERSKQPPK VGLNAIV DPRNPN+FALGGSDEYARLYDLRN  G AF
Sbjct: 181 SSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAF 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
           ++SNRVLDTFCPHHLIQTNNFHITG+AFSNSSELL+TYSDELIYLFQKNMGLGPSPLTVS
Sbjct: 241 STSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVS 300

Query: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMV 360
           SENLLRKLKRPQVYSGHRNSATVKGVNFFG N+EY+VSGSDCGHIYIWKKKGAVLVKLMV
Sbjct: 301 SENLLRKLKRPQVYSGHRNSATVKGVNFFGSNSEYVVSGSDCGHIYIWKKKGAVLVKLMV 360

Query: 361 GDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSR 420
           GDRNVVNHIEPHPHLPILATCGIE NVKIWTPMA DVPPLPDDIEQIMESNRQGREDHSR
Sbjct: 361 GDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDIEQIMESNRQGREDHSR 420

Query: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTE 480
           VTLTPDVIMHVLRLQRRQASAFTERRYSA DI SDE+NEWEA NLE LDGNVSFEEDSTE
Sbjct: 421 VTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEDNEWEAQNLEFLDGNVSFEEDSTE 480

Query: 481 YASECNIS 489
           Y+S+CNIS
Sbjct: 481 YSSDCNIS 488

[Close]

BLAST of HG10001409 vs. ExPASy TrEMBL
Match: A0A1S3CLR9 (DDB1- and CUL4-associated factor 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501905 PE=4 SV=1)

HSP 1 Score: 904.4 bits (2336), Expect = 2.0e-259
Identity = 437/481 (90.85%), Postives = 457/481 (95.01%), Query Frame = 0


Query: 8   MNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEF 67
           MNSCY+GMN + AEICNREIGIV SRNFSRRF ASE  VKQLNLE KLNGH+GCVNAVEF
Sbjct: 1   MNSCYQGMNSDFAEICNREIGIVPSRNFSRRFIASETNVKQLNLEHKLNGHNGCVNAVEF 60

Query: 68  NSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK 127
           NSTGDLLVSGSDDCKVILWDWA NS+RFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK
Sbjct: 61  NSTGDLLVSGSDDCKVILWDWAINSKRFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK 120

Query: 128 VRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLF 187
           VRLGQVLGDGRVIT+MLGEHQGSVHELA+EPGSP+I YSCGEDGLVQHFDLRNTSARKLF
Sbjct: 121 VRLGQVLGDGRVITQMLGEHQGSVHELAVEPGSPHIFYSCGEDGLVQHFDLRNTSARKLF 180

Query: 188 CCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVL 247
            CTTFAERSK PPK+V LNAI IDPRNPN FALGGSDEYARLYDLRN RGD  TSSNRV+
Sbjct: 181 YCTTFAERSKHPPKTVELNAIAIDPRNPNIFALGGSDEYARLYDLRNCRGDV-TSSNRVV 240

Query: 248 DTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRK 307
           DTFCPHHLIQTNNFHITG+AFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLR+
Sbjct: 241 DTFCPHHLIQTNNFHITGLAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRE 300

Query: 308 LKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVN 367
           LKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLM GD +VVN
Sbjct: 301 LKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMFGDHDVVN 360

Query: 368 HIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPDV 427
           HIEPHPHLPILATCGIENN+KIWTPMA+DVPPLPDD+EQIMESN+QGREDHSRVTLTPDV
Sbjct: 361 HIEPHPHLPILATCGIENNIKIWTPMASDVPPLPDDMEQIMESNKQGREDHSRVTLTPDV 420

Query: 428 IMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTEYASECNI 487
           I+H LRLQRRQ S FTERRY+ ADI+SDEENEWEAYNLEVLDGNVS EEDSTE+ASECNI
Sbjct: 421 IVHALRLQRRQTSVFTERRYNPADINSDEENEWEAYNLEVLDGNVSLEEDSTEHASECNI 480

Query: 488 S 489
           S
Sbjct: 481 S 480

[Close]

BLAST of HG10001409 vs. ExPASy TrEMBL
Match: A0A0A0KC69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G295950 PE=4 SV=1)

HSP 1 Score: 891.0 bits (2301), Expect = 2.3e-255
Identity = 428/481 (88.98%), Postives = 453/481 (94.18%), Query Frame = 0


Query: 8   MNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEF 67
           MNSCY GMN + AEICNR+IGIV S NFSRRF ASEIIVKQLNLE KLNGHDGCVNAVEF
Sbjct: 1   MNSCYRGMNSDFAEICNRQIGIVPSTNFSRRFIASEIIVKQLNLEHKLNGHDGCVNAVEF 60

Query: 68  NSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK 127
           NSTGDLLVSGSDDCKVILWDWARNS+RFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK
Sbjct: 61  NSTGDLLVSGSDDCKVILWDWARNSKRFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGK 120

Query: 128 VRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLF 187
           VRLGQVLGDGRVIT+MLGEHQGSVHELA+EPGSP+I YSCGEDGLVQHFDLRNTSARKLF
Sbjct: 121 VRLGQVLGDGRVITQMLGEHQGSVHELAVEPGSPHIFYSCGEDGLVQHFDLRNTSARKLF 180

Query: 188 CCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVL 247
            CT FAERS+ PP S+ LNAI IDPRNPN FALGGSDEYARLYDLRN RGD  TSSNRV+
Sbjct: 181 YCTAFAERSRHPPNSIELNAIAIDPRNPNFFALGGSDEYARLYDLRNCRGDV-TSSNRVV 240

Query: 248 DTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRK 307
           DTFCPHHL QTNNFHITG+ FSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLR+
Sbjct: 241 DTFCPHHLTQTNNFHITGLVFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRE 300

Query: 308 LKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVN 367
           LKRP V+SGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGA+LVKLM+GD +VVN
Sbjct: 301 LKRPHVFSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGALLVKLMLGDHDVVN 360

Query: 368 HIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPDV 427
           HIEPHPHLPILATCGIENNVKIWTPMA+DVPPLPDD+EQIMESN+QGRE+HSRVTLTPDV
Sbjct: 361 HIEPHPHLPILATCGIENNVKIWTPMASDVPPLPDDMEQIMESNKQGREEHSRVTLTPDV 420

Query: 428 IMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTEYASECNI 487
           I+HVLRLQRRQ SAFTERRY+ AD +SD ENEWEAYN E LDG+VSFE+DSTE+ASECNI
Sbjct: 421 IVHVLRLQRRQTSAFTERRYNPADNNSDGENEWEAYNQEALDGSVSFEDDSTEHASECNI 480

Query: 488 S 489
           S
Sbjct: 481 S 480

[Close]

BLAST of HG10001409 vs. ExPASy TrEMBL
Match: A0A5A7T1Q2 (DDB1-and CUL4-associated factor 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00830 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 3.3e-254
Identity = 437/524 (83.40%), Postives = 459/524 (87.60%), Query Frame = 0


Query: 8   MNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEII---------------------- 67
           MNSCY+GMN + AEICNREIGIV SRNFSRRF ASE++                      
Sbjct: 1   MNSCYQGMNSDFAEICNREIGIVPSRNFSRRFIASEVLQISSFNSNLILNPFTHDRLNFD 60

Query: 68  ---------------------VKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDDCKVI 127
                                VKQLNLE KLNGH+GCVNAVEFNSTGDLLVSGSDDCKVI
Sbjct: 61  FGVNYLTSSFNSPLNFAMQTNVKQLNLEHKLNGHNGCVNAVEFNSTGDLLVSGSDDCKVI 120

Query: 128 LWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVITKML 187
           LWDWA NS+RFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVIT+ML
Sbjct: 121 LWDWAINSKRFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVITQML 180

Query: 188 GEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLFCCTTFAERSKQPPKSVG 247
           GEHQGSVHELA+EPGSP+I YSCGEDGLVQHFDLRNTSARKLF CTTFAERSK PPK+V 
Sbjct: 181 GEHQGSVHELAVEPGSPHIFYSCGEDGLVQHFDLRNTSARKLFYCTTFAERSKHPPKTVE 240

Query: 248 LNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLIQTNNFHIT 307
           LNAI IDPRNPN FALGGSDEYARLYDLRN RGD  TSSNRV+DTFCPHHLIQTNNFHIT
Sbjct: 241 LNAIAIDPRNPNIFALGGSDEYARLYDLRNCRGDV-TSSNRVVDTFCPHHLIQTNNFHIT 300

Query: 308 GMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYSGHRNSATVK 367
           G+AFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLR+LKRPQVYSGHRNSATVK
Sbjct: 301 GLAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRELKRPQVYSGHRNSATVK 360

Query: 368 GVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIE 427
           GVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLM GD +VVNHIEPHPHLPILATCGIE
Sbjct: 361 GVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMFGDHDVVNHIEPHPHLPILATCGIE 420

Query: 428 NNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTE 487
           NN+KIWTPMA+DVPPLPDD+EQIMESN+QGREDHSRVTLTPDVI+H LRLQRRQ S FTE
Sbjct: 421 NNIKIWTPMASDVPPLPDDMEQIMESNKQGREDHSRVTLTPDVIVHALRLQRRQTSVFTE 480

Query: 488 RRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTEYASECNIS 489
           RRY+ ADI+SDEENEWEAYNLEVLDGNVS EEDSTE+ASECNIS
Sbjct: 481 RRYNPADINSDEENEWEAYNLEVLDGNVSLEEDSTEHASECNIS 523

[Close]

BLAST of HG10001409 vs. TAIR 10
Match: AT3G45620.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 567.4 bits (1461), Expect = 1.1e-161
Identity = 277/473 (58.56%), Postives = 353/473 (74.63%), Query Frame = 0


Query: 21  EICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDD 80
           EI NREIG       SRR SASE  VK+L+L  KLNGH+GCVNAVEFNSTGD+LVSGSDD
Sbjct: 17  EIFNREIGFSHPITISRRISASEGRVKKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDD 76

Query: 81  CKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVI 140
            +++LW+W   S + SYPSGH +N+FQTK +PFTDD+ I+TS ADG+VRLGQ+L +G+V 
Sbjct: 77  RQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVE 136

Query: 141 TKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLFCCTTFAE--RSKQ 200
           TK LG H G V++LA+ PG P + YSCGEDG VQHFD+R+ SA  +   + F +  R   
Sbjct: 137 TKRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQHFDIRSNSATMVLYSSPFTQGCRRHH 196

Query: 201 PPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYR---GDAFTSSNRVLDTFCPHHL 260
               + LN+I IDPRN  + A+GGSDEYAR+YD R  +          +  ++TFCP HL
Sbjct: 197 SSSRIRLNSIAIDPRNSYYLAVGGSDEYARVYDTRRVQLAPVCRHVLPDAPVNTFCPRHL 256

Query: 261 IQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYS 320
            +TN+ HITG+A+S + ELL++Y+DELIYLF+KNMG G SP++VS E  L++++ PQVY 
Sbjct: 257 RETNSVHITGLAYSKAGELLVSYNDELIYLFEKNMGYGSSPVSVSPEK-LQEMEEPQVYI 316

Query: 321 GHRNSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHL 380
           GHRN+ TVKGVNFFGPN EY+ SGSDCGHI+IWKKKG  LV+ MVGDR VVN +E HPH+
Sbjct: 317 GHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHI 376

Query: 381 PILATCGIENNVKIWTPMANDVPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQ 440
           P+LA+CGIE +VK+WTPM+NDV  LP+ I+++ME NR GRED SRVTLTPDVIMHVLRLQ
Sbjct: 377 PLLASCGIEKSVKLWTPMSNDVLSLPEKIDKVMELNRVGREDQSRVTLTPDVIMHVLRLQ 436

Query: 441 RRQASAFTERRYSAADIDSDEENEWEAYNLEVLDGNVSFEEDSTEYASECNIS 489
           RRQ SAFTERRY + DI SDE N+        +   V+ +++S++   EC +S
Sbjct: 437 RRQTSAFTERRYVSTDIGSDEGND-----ARFIASLVANDDESSD--RECTVS 481

[Close]

BLAST of HG10001409 vs. TAIR 10
Match: AT3G45620.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 551.6 bits (1420), Expect = 6.4e-157
Identity = 277/507 (54.64%), Postives = 353/507 (69.63%), Query Frame = 0


Query: 21  EICNREIGIVRSRNFSRRFSASEI----------------------------------IV 80
           EI NREIG       SRR SASE                                    V
Sbjct: 17  EIFNREIGFSHPITISRRISASEFRIMDLSVPKTKCYGLSVFCRMLRKSEPIQRLISGRV 76

Query: 81  KQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIF 140
           K+L+L  KLNGH+GCVNAVEFNSTGD+LVSGSDD +++LW+W   S + SYPSGH +N+F
Sbjct: 77  KKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVF 136

Query: 141 QTKIMPFTDDQKIVTSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYS 200
           QTK +PFTDD+ I+TS ADG+VRLGQ+L +G+V TK LG H G V++LA+ PG P + YS
Sbjct: 137 QTKFIPFTDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYS 196

Query: 201 CGEDGLVQHFDLRNTSARKLFCCTTFAE--RSKQPPKSVGLNAIVIDPRNPNHFALGGSD 260
           CGEDG VQHFD+R+ SA  +   + F +  R       + LN+I IDPRN  + A+GGSD
Sbjct: 197 CGEDGFVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRNSYYLAVGGSD 256

Query: 261 EYARLYDLRNYR---GDAFTSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDE 320
           EYAR+YD R  +          +  ++TFCP HL +TN+ HITG+A+S + ELL++Y+DE
Sbjct: 257 EYARVYDTRRVQLAPVCRHVLPDAPVNTFCPRHLRETNSVHITGLAYSKAGELLVSYNDE 316

Query: 321 LIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYSGHRNSATVKGVNFFGPNAEYIVSGSD 380
           LIYLF+KNMG G SP++VS E  L++++ PQVY GHRN+ TVKGVNFFGPN EY+ SGSD
Sbjct: 317 LIYLFEKNMGYGSSPVSVSPEK-LQEMEEPQVYIGHRNAQTVKGVNFFGPNDEYVTSGSD 376

Query: 381 CGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLP 440
           CGHI+IWKKKG  LV+ MVGDR VVN +E HPH+P+LA+CGIE +VK+WTPM+NDV  LP
Sbjct: 377 CGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVKLWTPMSNDVLSLP 436

Query: 441 DDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWE 489
           + I+++ME NR GRED SRVTLTPDVIMHVLRLQRRQ SAFTERRY + DI SDE N+  
Sbjct: 437 EKIDKVMELNRVGREDQSRVTLTPDVIMHVLRLQRRQTSAFTERRYVSTDIGSDEGND-- 496

[Close]

BLAST of HG10001409 vs. TAIR 10
Match: AT4G35140.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 445.7 bits (1145), Expect = 4.9e-125
Identity = 226/495 (45.66%), Postives = 315/495 (63.64%), Query Frame = 0


Query: 1   MWEKFSRMNSCYEGMNCELAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDG 60
           M EK  R  S + G++  + +   RE+G + SRNFS RFSASE +V +L + KKL  H G
Sbjct: 1   MSEKARRGRSNFNGLHHPVVDFWRREVGGISSRNFSNRFSASENLVLRLEIYKKLEKHKG 60

Query: 61  CVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIV 120
           CVN V FN+ GD+L+SGSDD +V+LWDW   + + S+ SGH +N+FQ K MPF+DD+ IV
Sbjct: 61  CVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIV 120

Query: 121 TSAADGKVRLGQVLGDGRVITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRN 180
           T AADG VR   +L   +V T  LG HQG  H+L +EPG+P+I Y+CGEDGLVQ FDLR 
Sbjct: 121 TCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDLRT 180

Query: 181 TSARKLFCCTTFAERSKQPPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAF 240
            +  +LF C +   R ++   ++ LNAI IDPRN N FA+GG +EYARLYD+R ++G+  
Sbjct: 181 EAPTELFTCRSVDPR-RRNMDAIQLNAIAIDPRNSNLFAVGGMEEYARLYDIRRFQGEGL 240

Query: 241 TSSNRVLDTFCPHHLIQTNNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVS 300
               R  D FCP HLI   +  ITG+AFS  SELL++Y+DE IYLF   MGLG +P+  S
Sbjct: 241 NGFTRAADHFCPPHLIGNEDVGITGLAFSEQSELLVSYNDEFIYLFTPGMGLGSNPIPSS 300

Query: 301 --SENLLRKLKRPQ------------VYSGHRNSATVKGVNFFGPNAEYIVSGSDCGHIY 360
             S++ + K +               VY GH+N  TVKGVNFFGP +EY+VSGSDCG I+
Sbjct: 301 PISKSPVSKSESSSSPKDENEHSVSLVYKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIF 360

Query: 361 IWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIENNVKIWTPMANDVPPLPDDIEQ 420
           IW+KKG  L+++M  DR+VVN IEPHPH+P+LA+ GIE+++K+WT  A +   LP++IE 
Sbjct: 361 IWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDIKVWTSKAAERATLPENIEL 420

Query: 421 IMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAADIDSDEENEWEAYNLE 480
                R  R    RV+   +++  +  LQ R +S+      S++    +  +    +N +
Sbjct: 421 ---RKRTPRGWMYRVSSPHELLAQLFSLQNRSSSSPEREGESSSATGRELLDLILTFNDQ 480

Query: 481 VLDGNVSFEEDSTEY 482
             D N + ++D   +
Sbjct: 481 SDDENATDDDDGNSH 491

[Close]

BLAST of HG10001409 vs. TAIR 10
Match: AT4G38480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-121
Identity = 203/388 (52.32%), Postives = 275/388 (70.88%), Query Frame = 0


Query: 19  LAEICNREIGIVRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGS 78
           +  +  RE+G++ +R+FS RFSASE ++++L L+KKL+ H GCVN V FN+ GD+L+SGS
Sbjct: 15  VVNVWERELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADGDILLSGS 74

Query: 79  DDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRLGQVLGDGR 138
           DD +VILWDW   S + S+ SGH +NIFQ K MPF+DD+ IVTSAAD +VR  ++L  G+
Sbjct: 75  DDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVRYSKILESGQ 134

Query: 139 VITKMLGEHQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSARKLFCCTTFAERSKQ 198
           V T +LG+HQG VH+LA+EPGSP+  Y+CGEDG V+HFDLR   A  LF C     +  +
Sbjct: 135 VETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLRTRVATNLFTC-----KEAK 194

Query: 199 PPKSVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRVLDTFCPHHLIQT 258
               V L+AI +DPRNP   A+ G DEYAR+YD+R+YR + + +  + +D FCP HLI  
Sbjct: 195 FNLVVYLHAIAVDPRNPGLLAVAGMDEYARVYDIRSYRSEGWYNFTQPIDHFCPGHLIGD 254

Query: 259 NNFHITGMAFSNSSELLITYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYSGHR 318
           ++  ITG+AFS+ SELL +YSDE IYLF  +MGLGP+P   S++    +   PQVY  H 
Sbjct: 255 DHVGITGLAFSDQSELLASYSDEFIYLFTPDMGLGPTPYPSSTKT--EERMTPQVYKEHT 314

Query: 319 NSATVKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPIL 378
           N  TVKGVNFFGP  EY+VSGSDCG I+IW+KK   L++ M  DR+VVN IE HPH+P++
Sbjct: 315 NRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLM 374

Query: 379 ATCGIENNVKIWTPMANDVPPLPDDIEQ 407
            + GI+ ++KIWTP   + P  P + +Q
Sbjct: 375 CSSGIDTDIKIWTPGGTEKPLSPGNAKQ 395

[Close]

BLAST of HG10001409 vs. TAIR 10
Match: AT5G10940.2 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 166.0 bits (419), Expect = 7.5e-41
Identity = 115/338 (34.02%), Postives = 173/338 (51.18%), Query Frame = 0


Query: 32  SRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDDCKVILWDWARN 91
           S    +R      +V++L+ E++L GH GCVNA+ +NS G LL+SGSDD ++ +W+++  
Sbjct: 23  SHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSR 82

Query: 92  SERFSYPSGHLDNIFQTKIMPFTDDQKIVTSAADGKVRL-------GQVLGDGRVITKML 151
               S  +GH  NIF TK +P T D+ +V+ A D +VRL       G+   D  +I   L
Sbjct: 83  KLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSAL 142

Query: 152 GE-HQGSVHELALEPGSPYILYSCGEDGLVQHFDLRNTSA------------RKLFCCTT 211
            + H   V +LA+EPG+P +++S  EDG ++  D R +++              L    +
Sbjct: 143 YQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRESTSCPPAGTAHQECRSVLLDLRS 202

Query: 212 FAERS-KQPPK-SVGLNAIVIDPRNPNHFALGGSDEYARLYDLRNYRGDAFTSSNRV--- 271
            A+R+   PPK ++ L +  I    P+   +GGSD +ARLYD R       +S  R+   
Sbjct: 203 GAKRALADPPKQTLSLKSCDISATRPHLLLVGGSDAFARLYD-RRMLPPLASSRKRMPPP 262

Query: 272 --LDTFCPHHLIQ--TNNFHITGMAFS-NSSELLITYSDELIYLFQKNMGLGPSPLTVS- 325
             ++ FCP HL +    N H+T + FS N  E+L++YS E +YL   N G G    T   
Sbjct: 263 PCVNYFCPMHLSERGRTNLHLTHVTFSPNGEEVLLSYSGEHVYLMNVNNGTGIMQYTPGD 322

HSP 2 Score: 91.3 bits (225), Expect = 2.4e-18
Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 314 YSGHRNSAT-VKGVNFFGPNAEYIVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPH 373
           Y GH N  T +K  +F G   EYI SGSD G  +IW+K+   L+K++VGD +V+N I+ H
Sbjct: 610 YVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCH 669

Query: 374 PHLPILATCGIENNVKIWTPMAN--------DVPPLPDDIEQIMESNRQ 414
           P   ++AT GI+N +KIW+P A+           P   ++ ++MESN+Q
Sbjct: 670 PFDSVVATSGIDNTIKIWSPTASVPSIVAGGSAGPATANVVEVMESNQQ 718

The following BLAST results are available for this feature:

BLAST of HG10001409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902691.1	2.0e-277	94.88	DDB1- and CUL4-associated factor 8 isoform X1 [Benincasa hispida]	[more]
XP_022986111.1	2.6e-269	92.42	DDB1- and CUL4-associated factor 8 [Cucurbita maxima]	[more]
KAG7010600.1	1.7e-268	92.21	DDB1- and CUL4-associated factor 8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038902693.1	2.9e-268	92.83	DDB1- and CUL4-associated factor 8 isoform X2 [Benincasa hispida]	[more]
XP_022944589.1	4.9e-268	92.21	DDB1- and CUL4-associated factor 8 [Cucurbita moschata]	[more]

BLAST of HG10001409 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N7N5	2.8e-85	40.63	DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1	[more]
Q5TAQ9	1.8e-84	40.18	DDB1- and CUL4-associated factor 8 OS=Homo sapiens OX=9606 GN=DCAF8 PE=1 SV=1	[more]
Q5U2M6	1.8e-84	40.18	DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 S...	[more]
Q5R448	3.1e-84	39.87	DDB1- and CUL4-associated factor 8 OS=Pongo abelii OX=9601 GN=DCAF8 PE=2 SV=1	[more]
Q6NRH1	1.5e-81	38.84	DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1	[more]

BLAST of HG10001409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA63	1.3e-269	92.42	DDB1- and CUL4-associated factor 8 OS=Cucurbita maxima OX=3661 GN=LOC111483952 P...	[more]
A0A6J1FWZ1	2.4e-268	92.21	DDB1- and CUL4-associated factor 8 OS=Cucurbita moschata OX=3662 GN=LOC111449002...	[more]
A0A1S3CLR9	2.0e-259	90.85	DDB1- and CUL4-associated factor 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0KC69	2.3e-255	88.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G295950 PE=4 SV=1	[more]
A0A5A7T1Q2	3.3e-254	83.40	DDB1-and CUL4-associated factor 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of HG10001409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45620.1	1.1e-161	58.56	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G45620.2	6.4e-157	54.64	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G35140.1	4.9e-125	45.66	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G38480.1	1.9e-121	52.32	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G10940.2	7.5e-41	34.02	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 352..391 e-value: 0.54 score: 18.7 coord: 249..287 e-value: 16.0 score: 9.3 coord: 191..231 e-value: 31.0 score: 7.6 coord: 48..87 e-value: 4.5E-9 score: 46.1 coord: 307..349 e-value: 0.072 score: 22.2 coord: 90..132 e-value: 59.0 score: 5.8 coord: 137..177 e-value: 0.42 score: 19.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 312..349 e-value: 4.4E-4 score: 21.0 coord: 52..87 e-value: 4.9E-7 score: 30.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 55..87 score: 14.251289
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 40..392 e-value: 6.8E-49 score: 168.5
None	No IPR available	PANTHER	PTHR15574:SF64	DDB1- AND CUL4-ASSOCIATED FACTOR 8-LIKE	coord: 15..488
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 55..87 score: 11.787407
IPR045151	DDB1- and CUL4-associated factor 8-like	PANTHER	PTHR15574	WD REPEAT DOMAIN-CONTAINING FAMILY	coord: 15..488
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 46..390

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001409.1	HG10001409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding