Homology
BLAST of HG10001394 vs. NCBI nr
Match:
XP_038902050.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Benincasa hispida])
HSP 1 Score: 704.9 bits (1818), Expect = 4.0e-199
Identity = 363/409 (88.75%), Postives = 377/409 (92.18%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPP N+DDNT+E FP IPVEIVSDEEMALIEAALAAAV+TARSSTSAI S C
Sbjct: 21 MADSSSGLPPINDDDNTNESFPNIPVEIVSDEEMALIEAALAAAVTTARSSTSAIRSTFC 80
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRGI SSQPDIEDLGKIAITQKKIKVNES LQR+ RNK LAV
Sbjct: 81 SSQNLFNTRSIHSITLLSKRGISSSQPDIEDLGKIAITQKKIKVNESFLQRYRRNKPLAV 140
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDIT+ EWCEKQ ELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKS EDRWALK
Sbjct: 141 TDITQMEWCEKQMELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSEEDRWALK 200
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNFIFGV QLVLEGLTRELPV + LV+GVWIVGVIDEIQMLEINTS+IPMLI
Sbjct: 201 LLNFIFGVNQLVLEGLTRELPV--------LSLVEGVWIVGVIDEIQMLEINTSKIPMLI 260
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
D KTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLIS FSIRQFFDFFSLNPHSTLSEEIA
Sbjct: 261 DRKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISGSFSIRQFFDFFSLNPHSTLSEEIA 320
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DSTTSFGFTAKTLDDV+RYY+NCCSMLPP+HNQLLLRYESQKDQSIIVEDEFAY+HGWL
Sbjct: 321 DSTTSFGFTAKTLDDVVRYYINCCSMLPPSHNQLLLRYESQKDQSIIVEDEFAYNHGWLK 380
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLET LQVW GQREPECTP+EERWKCRHCQF SDCP NAN +ATRKPE
Sbjct: 381 SQLETLLQVWGGQREPECTPREERWKCRHCQFVSDCPVNANFDATRKPE 421
BLAST of HG10001394 vs. NCBI nr
Match:
XP_022985622.1 (exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985624.1 exonuclease V, chloroplastic [Cucurbita maxima])
HSP 1 Score: 684.9 bits (1766), Expect = 4.3e-193
Identity = 350/409 (85.57%), Postives = 371/409 (90.71%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPP+N+DDNTH+G P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 22 MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRG+ SSQ D+EDL K + TQKKIKVNESLLQRF RNK LAV
Sbjct: 82 SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKS ED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 261
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 262 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 321
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DS+ SFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 322 DSSASFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLK 381
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+ASDCPANA+L+ TRKPE
Sbjct: 382 SQLETSLQVWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422
BLAST of HG10001394 vs. NCBI nr
Match:
XP_023511975.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 684.5 bits (1765), Expect = 5.7e-193
Identity = 352/409 (86.06%), Postives = 370/409 (90.46%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPPFN+DDNTH+G P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 22 MADSSSGLPPFNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRG+ SSQ DIEDL K + TQKKIKVNESLLQRF RNK LAV
Sbjct: 82 SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKS ED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 261
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 262 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 321
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DST S GFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 322 DSTASSGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLK 381
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+ASDCPANA+L+ TRKPE
Sbjct: 382 SQLETSLQVWHGQREPECTPLEERWKCRHCQYASDCPANASLDPTRKPE 422
BLAST of HG10001394 vs. NCBI nr
Match:
KAG6570766.1 (Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 681.4 bits (1757), Expect = 4.8e-192
Identity = 350/409 (85.57%), Postives = 368/409 (89.98%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPPFN+DDNTH+ P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 1 MADSSSGLPPFNDDDNTHKDIPNIPVEIVSDEEMALIEAALAAAVNTARSSSSAIHPPSC 60
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLF+TRSIHSITLLSKRG+ SSQ DIEDL K + TQKKIKVNESLLQRF RNK LAV
Sbjct: 61 SSQNLFHTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKS ED WALK
Sbjct: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 181 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 240
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 241 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 300
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DST SFGFTAKTLDDV+RYY+NCCSMLPP HNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 301 DSTVSFGFTAKTLDDVVRYYINCCSMLPPVHNQLLLRYESQKDQSIIGEDEFAYDHGWLK 360
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+ASDCPANA+L TRKPE
Sbjct: 361 SQLETSLQVWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 401
BLAST of HG10001394 vs. NCBI nr
Match:
XP_022943527.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 679.9 bits (1753), Expect = 1.4e-191
Identity = 349/409 (85.33%), Postives = 369/409 (90.22%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPPFN+DDNTH+ P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 22 MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRG+ SSQ DIEDL K + TQKKIKVNESLLQRF R K LAV
Sbjct: 82 SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLE+EVVKKVKVQVKS ED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 261
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 262 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 321
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DST SFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 322 DSTVSFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLK 381
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+AS+CPANA+L+ TRKPE
Sbjct: 382 SQLETSLQVWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422
BLAST of HG10001394 vs. ExPASy Swiss-Prot
Match:
Q9FKK6 (Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 SV=1)
HSP 1 Score: 353.6 bits (906), Expect = 3.0e-96
Identity = 201/403 (49.88%), Postives = 266/403 (66.00%), Query Frame = 0
Query: 4 SSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSCSSQ 63
+ SG ++ + H FP+IP+EIVS+EEMA+++AALAA+ S S ++ SPS +
Sbjct: 22 AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSV-SPSRITA 81
Query: 64 NLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAVTDI 123
+ ++I SITL SKR + S+ DIE ES L RF RN+AL VTD+
Sbjct: 82 G-GSPKTIRSITLFSKRKL-SACSDIE---------------ESYLHRFRRNQALGVTDL 141
Query: 124 TRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALKLLN 183
T TEWCEKQ E L G RK KAM+ G ARH LE EVVKKV+V+V+SNED+WALKLLN
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201
Query: 184 FIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQ--MLEINTSRIPMLID 243
I GV Q + EG TREL + +G V G WIVG+IDE++ E ++ P+LID
Sbjct: 202 SIAGVNQFLFEGRTREL--------LLLGFVGGQWIVGIIDELRKAYAEESSDSGPILID 261
Query: 244 TKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIAD 303
TKTR+RDT+PAEPQRRNG+LQLM YK L D+++ +GF FFD+FSLN + LS+++ D
Sbjct: 262 TKTRLRDTLPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRD 321
Query: 304 STTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLNS 363
+ G A+TL++++RYY N MLP +NQLLL+YE QKDQSII E F +DH W+ S
Sbjct: 322 HIANAGIKAQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMS 381
Query: 364 QLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNA 405
+ ++ W +RE TP+EERWKCR+CQFA CP N + +
Sbjct: 382 KYREVIEFWRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFES 398
BLAST of HG10001394 vs. ExPASy Swiss-Prot
Match:
A2VDX7 (Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2)
HSP 1 Score: 125.2 bits (313), Expect = 1.7e-27
Identity = 88/310 (28.39%), Postives = 146/310 (47.10%), Query Frame = 0
Query: 107 SLLQRFMRNKALAVTDITRTEWCEKQTELSL-LSG--VRKKTKAMEAGIARHAMLEAEVV 166
S ++RF K L VTD++ WCE+Q SG +K+ ++ G + H E EV
Sbjct: 68 SPMERF-HLKYLYVTDLSTQNWCEQQMVYGKEFSGFLTPEKSAILDTGASIHLARELEVH 127
Query: 167 KKVKVQVKSNEDRWALKLLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVI 226
V + + S ED WA+K LN + + L EG RE PV V+GV +VGVI
Sbjct: 128 DLVSIPITSKEDAWAVKFLNILSMIPTLQSEGRIREFPV--------FAEVEGVLLVGVI 187
Query: 227 DEIQMLEINTSRIPMLIDTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQF 286
DE L S L + KTR +P++ Q++ Q+ YK++ D+++ +
Sbjct: 188 DE---LHYTASGELELTELKTRGNPVLPSDAQKKKDYFQVSLYKYIFDAMVQGKVTAASL 247
Query: 287 FDFFSLNPHSTLSEEIADSTTSFGFTAKTLDDVIR-YYMNCCSMLPPTHNQLLLRYESQK 346
L+P L + G++ K+L D+I +++ P + L + Y Q
Sbjct: 248 IHHTKLDPEKPLGPSVLRHAQQGGYSVKSLGDLIELVFLSLTLSDLPLIDSLKIEYVHQG 307
Query: 347 DQSIIVEDEFAYDHGWLNSQLETSLQVWCGQREPECTPQEERWKCRHCQFASDC---PAN 406
+++ + A+ + S+++ + W G REP+ EE WKCR C +A C +
Sbjct: 308 TATVLGTEMVAFAEKEVRSKVQHYMTYWMGHREPQGVDVEEAWKCRMCNYADICEWKKSG 365
Query: 407 ANLNATRKPE 410
++AT +P+
Sbjct: 368 GLISATLEPQ 365
BLAST of HG10001394 vs. ExPASy Swiss-Prot
Match:
Q9H790 (Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 1.4e-24
Identity = 94/328 (28.66%), Postives = 148/328 (45.12%), Query Frame = 0
Query: 78 SKRGIYSSQPDIEDLGK----IAITQKKIKVN-ESLLQRFMRNKALAVTDITRTEWCEKQ 137
SK + P E LGK I++ K ++ S ++RF K L VTD+ WCE Q
Sbjct: 37 SKALVNMPGPSSESLGKDDKPISLQNWKRGLDILSPMERF-HLKYLYVTDLATQNWCELQ 96
Query: 138 TELSL-LSG--VRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALKLLNFIFGVK 197
T L G +K ++ G + H E E+ V V V + ED WA+K LN + +
Sbjct: 97 TAYGKELPGFLAPEKAAVLDTGASIHLARELELHDLVTVPVTTKEDAWAIKFLNILLLIP 156
Query: 198 QLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLIDTKTRVRDT 257
L EG RE PV G +GV +VGVIDE L L + KTR R
Sbjct: 157 TLQSEGHIREFPV--------FGEGEGVLLVGVIDE---LHYTAKGELELAELKTRRRPM 216
Query: 258 IPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIADSTTSFGFT 317
+P E Q++ Q+ YK++ D+++ + L L + GF+
Sbjct: 217 LPLEAQKKKDCFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLEKPLGPSVLRHAQQGGFS 276
Query: 318 AKTLDDVIR-YYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLNSQLETSLQ 377
K+L D++ +++ P + L + Y Q+ +++ + A+ + ++++ +
Sbjct: 277 VKSLGDLMELVFLSLTLSDLPVIDILKIEYIHQETATVLGTEIVAFKEKEVRAKVQHYMA 336
Query: 378 VWCGQREPECTPQEERWKCRHCQFASDC 397
W G REP+ EE WKCR C +A C
Sbjct: 337 YWMGHREPQGVDVEEAWKCRTCTYADIC 352
BLAST of HG10001394 vs. ExPASy Swiss-Prot
Match:
Q9CXP9 (Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 8.9e-24
Identity = 83/295 (28.14%), Postives = 137/295 (46.44%), Query Frame = 0
Query: 107 SLLQRFMRNKALAVTDITRTEWCEKQTELSL-LSG--VRKKTKAMEAGIARHAMLEAEVV 166
S ++RF K L VTD+ WCE Q L G +K ++ G + H E E+
Sbjct: 71 SPMERF-HLKYLYVTDLCTQNWCELQMVYGKELPGSLTPEKAAVLDTGASIHLAKELELH 130
Query: 167 KKVKVQVKSNEDRWALKLLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVI 226
V V + + ED WA+K LN + + L EG RE PV G V+G+++VGVI
Sbjct: 131 DLVTVPIATKEDAWAVKFLNILAMIPALQSEGRVREFPV--------FGEVEGIFLVGVI 190
Query: 227 DEIQMLEINTSRIPM-LIDTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQ 286
DE+ TS+ + L + KTR R +P Q++ Q+ YK++ D+++ +
Sbjct: 191 DELHY----TSKGELELAELKTRRRPVLPLPAQKKKDYFQVSLYKYIFDAMVQGKVTPAS 250
Query: 287 FFDFFSLNPHSTLSEEIADSTTSFGFTAKTLDDVIR-YYMNCCSMLPPTHNQLLLRYESQ 346
L L + G + K+L D++ +++ P + L L Y Q
Sbjct: 251 LIHHTKLCLDKPLGPSVLRHARQGGVSVKSLGDLMELVFLSLTLSDLPAIDTLKLEYIHQ 310
Query: 347 KDQSIIVEDEFAYDHGWLNSQLETSLQVWCGQREPECTPQEERWKCRHCQFASDC 397
+ +I+ + A++ + S+++ + W G R+P+ EE WKCR C + C
Sbjct: 311 ETATILGTEIVAFEEKEVKSKVQHYVAYWMGHRDPQGVDVEEAWKCRTCDYVDIC 352
BLAST of HG10001394 vs. ExPASy Swiss-Prot
Match:
F1Q514 (Exonuclease V OS=Danio rerio OX=7955 GN=exo5 PE=3 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 3.4e-23
Identity = 115/408 (28.19%), Postives = 176/408 (43.14%), Query Frame = 0
Query: 1 MADSSSGLPPFNN-DDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPS 60
M D+S P + DD + F IP SDEE IE+ L T + + PS
Sbjct: 1 MMDASRSQQPLDAWDDISDSEFLNIP----SDEES--IESQLPLIGETKGKHSVNLDKPS 60
Query: 61 CSSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALA 120
SS S H + + + D+ L + ++ + S +QRF R + L+
Sbjct: 61 SSS-------SFHKCSEEAPKQEAVKTDDVRGLKRKSLHENSF----SPMQRF-RKQHLS 120
Query: 121 VTDITRTEWCEKQTELSLLSG--VRKKTKAMEAGIAR--HAMLEAEVVKKVKVQVKSNED 180
VT + WCE ++ +LL RK+ + E I + H E E+ V V +++ ED
Sbjct: 121 VTLLCDQTWCEMKSVYNLLKPHIKRKEMQRTEVQIGQEIHLSRELEIQDVVPVDIRTRED 180
Query: 181 RWALKLLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSR 240
A+KLLN + + L RE PV G+ +GV+I+GVIDE L N
Sbjct: 181 GEAVKLLNMLHMIPLLEAGQRVREFPV--------FGVQEGVFIMGVIDE---LMYNQKG 240
Query: 241 IPMLIDTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTL 300
+L + KTR ++++P+ Q + Q+ YK L D L+ FD L L
Sbjct: 241 ELVLNELKTRRQNSLPSSAQDKVNCFQVGLYKLLFDGLVRGEMKKNHIFDHLKLRSAQIL 300
Query: 301 SEEIADSTTSFGFTAKTLDDVIRYYM--NCCSMLPPTHNQLLLRYESQKDQSIIVEDEFA 360
+ + G A+T ++++ + CS L P + L + Y Q I
Sbjct: 301 GAGVQAHAKNLGVHARTFEELVETLLITVSCSDL-PCIDLLQIEYFHQGSNGPIGTRVAP 360
Query: 361 YDHGWLNSQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANAN 402
+D + +L+ L W GQREP+ EE WKCR C + C N
Sbjct: 361 FDEAQIRGELQAYLSYWTGQREPKGVDIEEAWKCRSCLYEEICEWRKN 378
BLAST of HG10001394 vs. ExPASy TrEMBL
Match:
A0A6J1J5D7 (exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV=1)
HSP 1 Score: 684.9 bits (1766), Expect = 2.1e-193
Identity = 350/409 (85.57%), Postives = 371/409 (90.71%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPP+N+DDNTH+G P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 22 MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRG+ SSQ D+EDL K + TQKKIKVNESLLQRF RNK LAV
Sbjct: 82 SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKS ED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 261
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 262 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 321
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DS+ SFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 322 DSSASFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLK 381
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+ASDCPANA+L+ TRKPE
Sbjct: 382 SQLETSLQVWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422
BLAST of HG10001394 vs. ExPASy TrEMBL
Match:
A0A6J1FT99 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448276 PE=3 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 6.7e-192
Identity = 349/409 (85.33%), Postives = 369/409 (90.22%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADSSSGLPPFN+DDNTH+ P IPVEIVSDEEMALIEAALAAAV+TARSS+SAIH PSC
Sbjct: 22 MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SSQNLFNTRSIHSITLLSKRG+ SSQ DIEDL K + TQKKIKVNESLLQRF R K LAV
Sbjct: 82 SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITRTEWCEKQ EL LLSGVRKKTKAMEAGIARHAMLE+EVVKKVKVQVKS ED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNF FGV QL+ EGLTRELPV MGLV+GVW+VGVIDEIQMLEI T ++PMLI
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPV--------MGLVEGVWMVGVIDEIQMLEIGTCKVPMLI 261
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTR+R TIPAEPQ+RNGKLQLMCYKFLLD LI DGFS RQFFDFFSLNPHS LSEEIA
Sbjct: 262 DTKTRMRHTIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIA 321
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
DST SFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSII EDEFAYDHGWL
Sbjct: 322 DSTVSFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLK 381
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNATRKPE 410
SQLETSLQVW GQREPECTP EERWKCRHCQ+AS+CPANA+L+ TRKPE
Sbjct: 382 SQLETSLQVWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422
BLAST of HG10001394 vs. ExPASy TrEMBL
Match:
A0A5A7SXN1 (Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 PE=3 SV=1)
HSP 1 Score: 679.5 bits (1752), Expect = 8.8e-192
Identity = 353/401 (88.03%), Postives = 367/401 (91.52%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADS SGLPPF +DDNTHEGFP IPVEIVSDEEMALIEAALAAAV+T+RSS+S IHS SC
Sbjct: 1 MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SS NLFNTRSIHSITLLSKRGI SSQPDIEDLGKI ITQKKIKVNESLLQRF RNK LAV
Sbjct: 61 SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITR EWCEKQ E SLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNFI GV QLVLEGLTRELPV MGLV+GVWIVG+IDEIQMLEINT++IPMLI
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPV--------MGLVEGVWIVGIIDEIQMLEINTTKIPMLI 240
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLI-SDGFSIRQFFDFFSLNPHSTLSEEI 300
DTKTRVRDTIPA PQRRNGKLQLM YK LLD+LI SDGF IRQFFDFFSLNPHSTLSEEI
Sbjct: 241 DTKTRVRDTIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPIRQFFDFFSLNPHSTLSEEI 300
Query: 301 ADSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWL 360
ADS+TSFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSIIVED+FAYDHGWL
Sbjct: 301 ADSSTSFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWL 360
Query: 361 NSQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANA 401
SQLE LQVW GQREPECTPQEERWKCRHCQFASDCPANA
Sbjct: 361 KSQLEIQLQVWHGQREPECTPQEERWKCRHCQFASDCPANA 393
BLAST of HG10001394 vs. ExPASy TrEMBL
Match:
A0A0A0KC56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1)
HSP 1 Score: 672.5 bits (1734), Expect = 1.1e-189
Identity = 345/400 (86.25%), Postives = 366/400 (91.50%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADS SGLPPF +DDNTHEGFP IPVEIVSDEEMALIEAALAAAV+T+RSS+S IHS S
Sbjct: 1 MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSS 60
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SS +LFNTRSIHSITLLSKRGI+S+QPDIEDLGKI ITQKKIKVNESLLQRF RNK LAV
Sbjct: 61 SSHSLFNTRSIHSITLLSKRGIHSTQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITR EWCEKQ E SLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSIEDIWALK 180
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNFI GV QLVLEGLTRELPV MGLV+GVWIVG+IDEIQMLEI+T++IPMLI
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPV--------MGLVEGVWIVGIIDEIQMLEIDTTKIPMLI 240
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIA 300
DTKTRVRDTIPA PQRRNGKLQLM YKFLLD+LISDG SIRQFFDFFSLNPHSTLSEEI+
Sbjct: 241 DTKTRVRDTIPAVPQRRNGKLQLMFYKFLLDNLISDGLSIRQFFDFFSLNPHSTLSEEIS 300
Query: 301 DSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLN 360
D+TTS GFTAKTLDDV+RYY+NCCSMLPPTHNQLL+RYESQKDQSIIVED+FAYDHGWL
Sbjct: 301 DTTTSIGFTAKTLDDVVRYYINCCSMLPPTHNQLLIRYESQKDQSIIVEDKFAYDHGWLK 360
Query: 361 SQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANA 401
+QLET LQVW GQREPECTPQEERWKCRHCQFA DCP NA
Sbjct: 361 TQLETQLQVWHGQREPECTPQEERWKCRHCQFAFDCPTNA 392
BLAST of HG10001394 vs. ExPASy TrEMBL
Match:
A0A1S3CLU8 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501929 PE=3 SV=1)
HSP 1 Score: 672.5 bits (1734), Expect = 1.1e-189
Identity = 350/401 (87.28%), Postives = 364/401 (90.77%), Query Frame = 0
Query: 1 MADSSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSC 60
MADS SGLPPF +DDNTHEGFP IPVEIVSDEEMALIEAALAAAV+T+RSS+S IHS SC
Sbjct: 1 MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60
Query: 61 SSQNLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAV 120
SS NLFNTRSIHSITLLSKRGI SSQPDIEDLGKI ITQKKIKVNESLLQRF RNK LAV
Sbjct: 61 SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120
Query: 121 TDITRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALK 180
TDITR EWCEKQ E SLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180
Query: 181 LLNFIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQMLEINTSRIPMLI 240
LLNFI GV QLVLEGLTRELPV MGLV+GVWIVG+IDEIQMLEINT++IPMLI
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPV--------MGLVEGVWIVGIIDEIQMLEINTTKIPMLI 240
Query: 241 DTKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLI-SDGFSIRQFFDFFSLNPHSTLSEEI 300
DTKTRVRDTIPA PQRRNGKLQLM YK LLD+LI SDGF FFDFFSLNPHSTLSEEI
Sbjct: 241 DTKTRVRDTIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPSDNFFDFFSLNPHSTLSEEI 300
Query: 301 ADSTTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWL 360
ADS+TSFGFTAKTLDDV+RYY+NCCSMLPPTHNQLLLRYESQKDQSIIVED+FAYDHGWL
Sbjct: 301 ADSSTSFGFTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWL 360
Query: 361 NSQLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANA 401
SQLE LQVW GQREPECTPQEERWKCRHCQFASDCPANA
Sbjct: 361 KSQLEIQLQVWHGQREPECTPQEERWKCRHCQFASDCPANA 393
BLAST of HG10001394 vs. TAIR 10
Match:
AT5G60370.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 353.6 bits (906), Expect = 2.1e-97
Identity = 201/403 (49.88%), Postives = 266/403 (66.00%), Query Frame = 0
Query: 4 SSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSCSSQ 63
+ SG ++ + H FP+IP+EIVS+EEMA+++AALAA+ S S ++ SPS +
Sbjct: 22 AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSV-SPSRITA 81
Query: 64 NLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAVTDI 123
+ ++I SITL SKR + S+ DIE ES L RF RN+AL VTD+
Sbjct: 82 G-GSPKTIRSITLFSKRKL-SACSDIE---------------ESYLHRFRRNQALGVTDL 141
Query: 124 TRTEWCEKQTELSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSNEDRWALKLLN 183
T TEWCEKQ E L G RK KAM+ G ARH LE EVVKKV+V+V+SNED+WALKLLN
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201
Query: 184 FIFGVKQLVLEGLTRELPVSYVCTGVRMGLVDGVWIVGVIDEIQ--MLEINTSRIPMLID 243
I GV Q + EG TREL + +G V G WIVG+IDE++ E ++ P+LID
Sbjct: 202 SIAGVNQFLFEGRTREL--------LLLGFVGGQWIVGIIDELRKAYAEESSDSGPILID 261
Query: 244 TKTRVRDTIPAEPQRRNGKLQLMCYKFLLDSLISDGFSIRQFFDFFSLNPHSTLSEEIAD 303
TKTR+RDT+PAEPQRRNG+LQLM YK L D+++ +GF FFD+FSLN + LS+++ D
Sbjct: 262 TKTRLRDTLPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRD 321
Query: 304 STTSFGFTAKTLDDVIRYYMNCCSMLPPTHNQLLLRYESQKDQSIIVEDEFAYDHGWLNS 363
+ G A+TL++++RYY N MLP +NQLLL+YE QKDQSII E F +DH W+ S
Sbjct: 322 HIANAGIKAQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMS 381
Query: 364 QLETSLQVWCGQREPECTPQEERWKCRHCQFASDCPANANLNA 405
+ ++ W +RE TP+EERWKCR+CQFA CP N + +
Sbjct: 382 KYREVIEFWRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFES 398
BLAST of HG10001394 vs. TAIR 10
Match:
AT3G57110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60370.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 51.2 bits (121), Expect = 2.3e-06
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 0
Query: 4 SSSGLPPFNNDDNTHEGFPKIPVEIVSDEEMALIEAALAAAVSTARSSTSAIHSPSCSSQ 63
+ SG ++ + H FP+IP+EI+++EE+ +++AALAA+ S S ++ SPS
Sbjct: 22 AQSGTVSISSPQSHHVVFPEIPIEIINEEEIVILDAALAASHSILPSVIRSV-SPSQMIA 81
Query: 64 NLFNTRSIHSITLLSKRGIYSSQPDIEDLGKIAITQKKIKVNESLLQRFMRNKALAVTDI 123
+ +I SITL SKR + + + + ES L RF RN++L VTD+
Sbjct: 82 G-GSPITIRSITLFSKRKLSAC----------------LYIEESYLHRFRRNQSLGVTDL 126
Query: 124 TRT 127
T T
Sbjct: 142 TGT 126
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038902050.1 | 4.0e-199 | 88.75 | LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Benincasa hispida] | [more] |
| XP_022985622.1 | 4.3e-193 | 85.57 | exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, c... | [more] |
| XP_023511975.1 | 5.7e-193 | 86.06 | LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
| KAG6570766.1 | 4.8e-192 | 85.57 | Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| XP_022943527.1 | 1.4e-191 | 85.33 | LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9FKK6 | 3.0e-96 | 49.88 | Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 S... | [more] |
| A2VDX7 | 1.7e-27 | 28.39 | Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2 | [more] |
| Q9H790 | 1.4e-24 | 28.66 | Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1 | [more] |
| Q9CXP9 | 8.9e-24 | 28.14 | Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1 | [more] |
| F1Q514 | 3.4e-23 | 28.19 | Exonuclease V OS=Danio rerio OX=7955 GN=exo5 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1J5D7 | 2.1e-193 | 85.57 | exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV... | [more] |
| A0A6J1FT99 | 6.7e-192 | 85.33 | LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=... | [more] |
| A0A5A7SXN1 | 8.8e-192 | 88.03 | Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 P... | [more] |
| A0A0A0KC56 | 1.1e-189 | 86.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1 | [more] |
| A0A1S3CLU8 | 1.1e-189 | 87.28 | LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G60370.1 | 2.1e-97 | 49.88 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
| AT3G57110.1 | 2.3e-06 | 34.15 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
