HG10001375 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001375
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	Chr09: 16556877 .. 16557359 (+)
RNA-Seq Expression	HG10001375
Synteny	HG10001375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTCCATTGCTTTCTCTTCTCTTCTCTTCATCTCCGTTTCGCTCTTCATCAACTCCGCTTTCTCTTTGGAACTATCACAGCAACTTCCTCCTTCTCCATCCCCTGAAAATTCTCCTCCACTACCTTCTCCTACTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCACTCCCACTCCATCTCCAGCGCCTGTTCCTTCTCCCTCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACTGGCGGTGGAGAAGACTCTGTAGCCTCCAAAGGCGGGATGAATGGTGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGTCAAGATAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGGTCTTCGTTTTTGTGA

mRNA sequence

ATGGCGAATTCCATTGCTTTCTCTTCTCTTCTCTTCATCTCCGTTTCGCTCTTCATCAACTCCGCTTTCTCTTTGGAACTATCACAGCAACTTCCTCCTTCTCCATCCCCTGAAAATTCTCCTCCACTACCTTCTCCTACTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCACTCCCACTCCATCTCCAGCGCCTGTTCCTTCTCCCTCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACTGGCGGTGGAGAAGACTCTGTAGCCTCCAAAGGCGGGATGAATGGTGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGTCAAGATAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGGTCTTCGTTTTTGTGA

Coding sequence (CDS)

ATGGCGAATTCCATTGCTTTCTCTTCTCTTCTCTTCATCTCCGTTTCGCTCTTCATCAACTCCGCTTTCTCTTTGGAACTATCACAGCAACTTCCTCCTTCTCCATCCCCTGAAAATTCTCCTCCACTACCTTCTCCTACTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCACTCCCACTCCATCTCCAGCGCCTGTTCCTTCTCCCTCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACTGGCGGTGGAGAAGACTCTGTAGCCTCCAAAGGCGGGATGAATGGTGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGTCAAGATAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGGTCTTCGTTTTTGTGA

Protein sequence

MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPTPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

Homology

[Close]

BLAST of HG10001375 vs. NCBI nr
Match: XP_038901486.1 (early nodulin-20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-56
Identity = 143/168 (85.12%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSP---SPENSPPLPSPT-----PASSP 60
           MA SI F SLLFI VSLFIN +FSLELSQQLPPSP   SPENSPPLPSPT     PASSP
Sbjct: 1   MAKSIPFCSLLFIFVSLFINVSFSLELSQQLPPSPSPESPENSPPLPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGG 120
           VESPLHSPPAPPPSDLT +PSP+  PSPSP+PSPSPTADSDFSNSTS+GGGEDS ASKGG
Sbjct: 61  VESPLHSPPAPPPSDLTHSPSPS--PSPSPSPSPSPTADSDFSNSTSSGGGEDSEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           M GGKKAGIAVGVIAA  FVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 MTGGKKAGIAVGVIAAASFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166

[Close]

BLAST of HG10001375 vs. NCBI nr
Match: XP_008463942.2 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo] >KAA0035341.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa] >TYK14296.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51
Identity = 133/165 (80.61%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVES 60
           MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNG 120
           PLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  N TS GGGEDS  SKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of HG10001375 vs. NCBI nr
Match: XP_011656995.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hypothetical protein Csa_020743 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-49
Identity = 131/165 (79.39%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVES 60
           M  +I  S LLFI VSLF N +FSLE  QQLPPSPSP NSPPLPSPT     PASSPVES
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60

Query: 61  PLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNG 120
           PLHSPPAPPPSDL  TPSPAP+  P  +PS SP ADSD SN TS GGGEDS  SKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of HG10001375 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 3.7e-47
Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSP 60
           MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADSDF NS + GGG ++ ASKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of HG10001375 vs. NCBI nr
Match: KAG6605547.1 (hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013894.1 hypothetical protein SDJN02_24063, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 121/168 (72.02%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSP 60
           MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADSDF NS + GGG ++  SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of HG10001375 vs. ExPASy TrEMBL
Match: A0A5D3CV84 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00190 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.0e-52
Identity = 133/165 (80.61%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVES 60
           MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNG 120
           PLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  N TS GGGEDS  SKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of HG10001375 vs. ExPASy TrEMBL
Match: A0A1S3CKF5 (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103501947 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.0e-52
Identity = 133/165 (80.61%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVES 60
           MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNG 120
           PLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  N TS GGGEDS  SKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of HG10001375 vs. ExPASy TrEMBL
Match: A0A0A0KGE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50
Identity = 131/165 (79.39%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVES 60
           M  +I  S LLFI VSLF N +FSLE  QQLPPSPSP NSPPLPSPT     PASSPVES
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60

Query: 61  PLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNG 120
           PLHSPPAPPPSDL  TPSPAP+  P  +PS SP ADSD SN TS GGGEDS  SKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of HG10001375 vs. ExPASy TrEMBL
Match: A0A6J1K7T9 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111490958 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.8e-47
Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSP 60
           MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADSDF NS + GGG ++ ASKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of HG10001375 vs. ExPASy TrEMBL
Match: A0A6J1H149 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111459430 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSP 60
           MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGG 120
            ESPL SPPAPP SDLTP PSPA VPSPSP P+PS TADSDF NS + GGG ++  SKGG
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of HG10001375 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.8e-15
Identity = 78/171 (45.61%), Postives = 106/171 (61.99%), Query Frame = 0


Query: 10  LLFISVSLFINSAF-SLELSQQLPPSPSPE--NSPPLPSPTPA-----SSPVESPL-HSP 69
           L FI V++ ++    S E+  +  P+PSP+  +SP + +  P+     +SP ESP+ +S 
Sbjct: 3   LEFIIVAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYSS 62

Query: 70  PAPPPSDLTPTPSPAPVPSPSP-------------TPSPSPTADSDFSNSTSTG--GGED 129
           P  P ++ +P+PSPA  PS SP             +PSPSP A SD ++S  TG  G + 
Sbjct: 63  PPEPETEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSPEA-SDVNHSDITGIEGEKL 122

Query: 130 SVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAAR 157
              S GGM+GGKK G+A G IAAVC VG+ GFVYKKRQ+NIRRS+YG AAR
Sbjct: 123 PSGSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of HG10001375 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-08
Identity = 65/161 (40.37%), Postives = 83/161 (51.55%), Query Frame = 0


Query: 24  SLELSQQLPPSPSPE-NSPPLPSPTP-ASSPVESPLHSPPAPPPSDLTPT----PSPAPV 83
           S E    LPPS SPE NSP  P+ +P   S  +SP  SPP PPP   +P+    P PAPV
Sbjct: 110 SPEADSPLPPSSSPEANSPQSPASSPKPESLADSP--SPPPPPPQPESPSSPSYPEPAPV 169

Query: 84  PSPS---------------PTPSPSPTADSDFSNSTSTGGGEDSVASKG---GMNGGKKA 143
           P+PS               P+P+PSP          S   GE+    +G   GM+G +KA
Sbjct: 170 PAPSDDDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKA 229

Query: 144 GIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 161
           GIA+G I  V  + IG  VYKKR+DN+ R++Y       FL
Sbjct: 230 GIAIGTILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of HG10001375 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 58/154 (37.66%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 12  FISVSLFINSAFSL-----ELSQQLPPSPSPENSPPLPSPTPASSPVESPLHSPPAPPPS 71
           FI V+L + S  +L     E+S +   SP+ E+S  LP      SP  +  +    P  S
Sbjct: 5   FIIVALVMVSGVALLMVSGEISTE-EISPAIEHSSSLPQSETEMSPSPTMSNDYDYPSSS 64

Query: 72  DLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASKGGMNGGKKAGIA-VGV 131
            LT                   + D ++++ST  GG E SV  + G  GGKK GIA VG 
Sbjct: 65  QLT------------------ESNDLNYTDSTRPGGEEASVGGENGGGGGKKTGIAVVGS 124

Query: 132 IAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSF 160
           IAA   VG GG+V KKR++NIRRS+YG A+   F
Sbjct: 125 IAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

The following BLAST results are available for this feature:

BLAST of HG10001375 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901486.1	7.4e-56	85.12	early nodulin-20-like isoform X1 [Benincasa hispida]	[more]
XP_008463942.2	1.4e-51	80.61	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis ...	[more]
XP_011656995.1	1.0e-49	79.39	proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hy...	[more]
XP_022995398.1	3.7e-47	73.21	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
KAG6605547.1	1.4e-46	72.02	hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10001375 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10001375 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CV84	7.0e-52	80.61	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var....	[more]
A0A1S3CKF5	7.0e-52	80.61	pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3...	[more]
A0A0A0KGE9	5.0e-50	79.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1	[more]
A0A6J1K7T9	1.8e-47	73.21	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H149	1.3e-45	71.43	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of HG10001375 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	8.8e-15	45.61	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	3.6e-08	40.37	proline-rich family protein	[more]
AT5G60630.1	1.7e-05	37.66	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..112
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 5..160
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 5..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001375.1	HG10001375.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane