HG10001355 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001355
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phenylalanine ammonia-lyase
Location	Chr09: 16347184 .. 16347768 (-)
RNA-Seq Expression	HG10001355
Synteny	HG10001355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGAGTCAAACCAGAGCTGCCATGTTGGTCAGAATCAACACCCTTCTCCAAGGCTATTCCGACATTATATGAACCTTCTCAACCATTACGTCACACATTGCCTTCCTCTGTGAGGCATTATCAAGCCATAGATTTGAGACAAATGAAGAGCTTCATCCTTCAAGATTCTGTGAAAAAGATTAGCTGAAAGTCATTGATAGAGAAGTTCAGCAAGTTCTTGTTCAACATGCATTGAACAACAACGACGATCTAAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCATTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATACCCAACAAGATAAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTACTATGTTGACAGGTGAGAAGGTGAAATCCCCTGGGGAAGAATTTGAAGAAGTTTTTACTGAAATTTGTGAGGGGAAAATCATTGATCCTCTGCTTGAATGCCTTGAGCATTGGGATGGGACTCCTCTTCCTGTAAATTAG

mRNA sequence

ATGGAAGAGAGTCAAACCAGAGCTGCCATAGAAGTTCAGCAAGTTCTTGTTCAACATGCATTGAACAACAACGACGATCTAAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCATTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATACCCAACAAGATAAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTACTATGTTGACAGGTGAGAAGGTGAAATCCCCTGGGGAAGAATTTGAAGAAGTTTTTACTGAAATTTGTGAGGGGAAAATCATTGATCCTCTGCTTGAATGCCTTGAGCATTGGGATGGGACTCCTCTTCCTGTAAATTAG

Coding sequence (CDS)

ATGGAAGAGAGTCAAACCAGAGCTGCCATAGAAGTTCAGCAAGTTCTTGTTCAACATGCATTGAACAACAACGACGATCTAAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCATTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATACCCAACAAGATAAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTACTATGTTGACAGGTGAGAAGGTGAAATCCCCTGGGGAAGAATTTGAAGAAGTTTTTACTGAAATTTGTGAGGGGAAAATCATTGATCCTCTGCTTGAATGCCTTGAGCATTGGGATGGGACTCCTCTTCCTGTAAATTAG

Protein sequence

MEESQTRAAIEVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNKIKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGTPLPVN

Homology

[Close]

BLAST of HG10001355 vs. NCBI nr
Match: KAG6570795.1 (Phenylalanine ammonia-lyase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. NCBI nr
Match: XP_022986145.1 (phenylalanine ammonia-lyase-like [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. NCBI nr
Match: XP_022944704.1 (phenylalanine ammonia-lyase-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. NCBI nr
Match: QCZ35118.1 (phenylalnine ammonia lyase 3 [Cucurbita pepo])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTVLLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. NCBI nr
Match: XP_038900962.1 (phenylalanine ammonia-lyase-like [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV+HALNNNDDLKNSNSSIFLKIGAFEEELKT LPKEVESGRQAIAKG P IPNK
Sbjct: 591 KLRQVLVEHALNNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAIAKGIPIIPNK 650

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKVKSPGEEF++VFT ICEGKIIDPLLECLE W+GT
Sbjct: 651 IKDCRSYPLYRFVREELGTAILTGEKVKSPGEEFDKVFTAICEGKIIDPLLECLESWNGT 710

Query: 131 PLPVN 136
           PLP+N
Sbjct: 711 PLPIN 715

[Close]

BLAST of HG10001355 vs. ExPASy Swiss-Prot
Match: Q43052 (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis OX=34292 GN=PALG2B PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.5e-48
Identity = 87/124 (70.16%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV+HAL N + ++NS +SIF KIG+FEEELKT LPKEVES R  +  G P IPN+
Sbjct: 586 KLRQVLVEHALVNGEKVRNSTTSIFQKIGSFEEELKTLLPKEVESARLEVENGNPAIPNR 645

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLY+FVREELGT++LTGEKVKSPGEEF++VFT IC GK+IDPLLECL+ WDG 
Sbjct: 646 IKECRSYPLYKFVREELGTSLLTGEKVKSPGEEFDKVFTAICAGKLIDPLLECLKEWDGA 705

Query: 131 PLPV 135
           PLP+
Sbjct: 706 PLPI 709

[Close]

BLAST of HG10001355 vs. ExPASy Swiss-Prot
Match: P45735 (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera OX=29760 GN=PAL PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-47
Identity = 86/124 (69.35%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +V+QVLV+HALNN +  KN ++SIF KIGAFEEELK  LPKEVES R  +  G P+IPN+
Sbjct: 292 KVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESARDGVESGNPSIPNR 351

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLY+FVREELGT +LTGEKV+SPGE+F++VFT +CEGKIIDPLL+CL  W+G 
Sbjct: 352 IKECRSYPLYKFVREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411

Query: 131 PLPV 135
           PLP+
Sbjct: 412 PLPI 415

[Close]

BLAST of HG10001355 vs. ExPASy Swiss-Prot
Match: P45727 (Phenylalanine ammonia-lyase OS=Persea americana OX=3435 GN=PAL PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-45
Identity = 83/124 (66.94%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV+HAL N +  K+S++SIF KIGAFEEELKTHLPKEVES R  + +G   IPN+
Sbjct: 496 KLRQVLVEHALINGEKEKDSSTSIFQKIGAFEEELKTHLPKEVESARIELERGNSAIPNR 555

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLY+FVREEL T++LTGEKV+SPGEEF++VF+ IC+GK+IDPLLECL  W+G 
Sbjct: 556 IKECRSYPLYKFVREELKTSLLTGEKVRSPGEEFDKVFSAICQGKVIDPLLECLREWNGA 615

Query: 131 PLPV 135
           P+P+
Sbjct: 616 PIPI 619

[Close]

BLAST of HG10001355 vs. ExPASy Swiss-Prot
Match: P07218 (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris OX=3885 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 5.2e-45
Identity = 87/124 (70.16%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV HAL N ++ K+ N+SIF KI  FEEELKT LPKEVES R A   GK  IPNK
Sbjct: 382 KLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKTILPKEVESTRAAYESGKAAIPNK 441

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLY+FVREELGT +LTGEKVKSPGEEF+++FT IC+GKIIDPLLECL  W+G 
Sbjct: 442 IKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGA 501

Query: 131 PLPV 135
           PLP+
Sbjct: 502 PLPI 505

[Close]

BLAST of HG10001355 vs. ExPASy Swiss-Prot
Match: P25872 (Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.2e-45
Identity = 83/124 (66.94%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV HA+NN +  KN NSSIF KIGAFE+ELK  LPKEVES R A+  G P IPN+
Sbjct: 591 KLRQVLVDHAMNNGESEKNVNSSIFQKIGAFEDELKAVLPKEVESARAALESGNPAIPNR 650

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           I +CRSYPLYRFVR+ELGT +LTGEKV+SPGEE ++VFT +C G+IIDP+LECL+ W+G 
Sbjct: 651 ITECRSYPLYRFVRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSWNGA 710

Query: 131 PLPV 135
           PLP+
Sbjct: 711 PLPI 714

[Close]

BLAST of HG10001355 vs. ExPASy TrEMBL
Match: A0A6J1JD92 (Phenylalanine ammonia-lyase OS=Cucurbita maxima OX=3661 GN=LOC111483977 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.0e-57
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. ExPASy TrEMBL
Match: A0A6J1FYU1 (Phenylalanine ammonia-lyase OS=Cucurbita moschata OX=3662 GN=LOC111449086 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.0e-57
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. ExPASy TrEMBL
Match: A0A4Y5RSS7 (Phenylalanine ammonia-lyase OS=Cucurbita pepo OX=3663 GN=PAL3 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.0e-57
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DDLKN+N+SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 587 KLRQVFVEHALNNDDDLKNTNASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 646

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 647 IKDCRSYPLYRFVREELGTVLLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 706

Query: 131 PLPVN 136
           PLPVN
Sbjct: 707 PLPVN 711

[Close]

BLAST of HG10001355 vs. ExPASy TrEMBL
Match: A0A0A0KEL3 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G147460 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.8e-56
Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QVLV+HAL NNDDLKNSNSSIFLKIGAFEEELKT LPKEVESGRQAI+KGK TIPNK
Sbjct: 589 KLRQVLVEHALKNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAISKGKATIPNK 648

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYP+YRFVREELGT MLTGEKVKSPGEEF++VF+ ICEGKIIDPLLECL+ W+GT
Sbjct: 649 IKDCRSYPIYRFVREELGTDMLTGEKVKSPGEEFDKVFSAICEGKIIDPLLECLQSWNGT 708

Query: 131 PLPVN 136
           PLP+N
Sbjct: 709 PLPIN 713

[Close]

BLAST of HG10001355 vs. ExPASy TrEMBL
Match: A0A4Y5RSF5 (Phenylalanine ammonia-lyase OS=Cucurbita pepo OX=3663 GN=PAL4 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV V+HALNN+DD KN+++SIFLKIGAFEEELKTHLPKEVESGR AIAKGK TIPNK
Sbjct: 546 KLRQVFVEHALNNDDDPKNTSASIFLKIGAFEEELKTHLPKEVESGRLAIAKGKATIPNK 605

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IKDCRSYPLYRFVREELGT +LTGEKV+SPGEEF++VFT ICEGKIIDPLLECLE WDGT
Sbjct: 606 IKDCRSYPLYRFVREELGTALLTGEKVRSPGEEFDKVFTAICEGKIIDPLLECLERWDGT 665

Query: 131 PLPVN 136
           PLPVN
Sbjct: 666 PLPVN 670

[Close]

BLAST of HG10001355 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-45
Identity = 83/124 (66.94%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++QV+V HAL N +  KN+ +SIF KIGAFEEELK  LPKEVE+ R A   G   IPN+
Sbjct: 601 KLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNR 660

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLYRFVREELGT +LTGEKV SPGEEF++VFT ICEGKIIDP++ECL  W+G 
Sbjct: 661 IKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGA 720

Query: 131 PLPV 135
           P+P+
Sbjct: 721 PIPI 724

[Close]

BLAST of HG10001355 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 177.6 bits (449), Expect = 6.9e-45
Identity = 81/123 (65.85%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 12  VQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNKI 71
           ++QV+V HAL+N +  KN+ +SIF KIGAFEEELK  LPKEVE+ R A   G   IPN+I
Sbjct: 594 LRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRI 653

Query: 72  KDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGTP 131
           K+CRSYPLYRFVREELGT +LTGEKV SPGEEF++VFT +CEGK+IDPL++CL+ W+G P
Sbjct: 654 KECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAP 713

Query: 132 LPV 135
           +P+
Sbjct: 714 IPI 716

[Close]

BLAST of HG10001355 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-36
Identity = 71/124 (57.26%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 11  EVQQVLVQHALNNNDDLKNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNK 70
           +++ +LV HAL + +   NS +S+F KIGAFE ELK  LPKEVE  R    +G   I N+
Sbjct: 583 KLRHILVDHALADPEREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANR 642

Query: 71  IKDCRSYPLYRFVREELGTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGT 130
           IK+CRSYPLYRFVR+EL T +LTGE V+SPGEEF++VF  I +GK+IDPLLECL+ W+G 
Sbjct: 643 IKECRSYPLYRFVRDELNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGA 702

Query: 131 PLPV 135
           P+ +
Sbjct: 703 PVSI 706

[Close]

BLAST of HG10001355 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 130.6 bits (327), Expect = 9.7e-31
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 28  KNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNKIKDCRSYPLYRFVREEL 87
           +    ++F KIGAFE ELK  LPKEVE  R     G   + N+IK CRSYPLYRFVR EL
Sbjct: 587 EGETDTVFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNEL 646

Query: 88  GTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGTPLPV 135
            T +LTGE V+SPGE+F++VF  I +GK+IDPL ECL+ W+G P+ +
Sbjct: 647 ETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAPISI 693

[Close]

BLAST of HG10001355 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 130.6 bits (327), Expect = 9.7e-31
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 28  KNSNSSIFLKIGAFEEELKTHLPKEVESGRQAIAKGKPTIPNKIKDCRSYPLYRFVREEL 87
           +    ++F KIGAFE ELK  LPKEVE  R     G   + N+IK CRSYPLYRFVR EL
Sbjct: 591 EGETDTVFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNEL 650

Query: 88  GTTMLTGEKVKSPGEEFEEVFTEICEGKIIDPLLECLEHWDGTPLPV 135
            T +LTGE V+SPGE+F++VF  I +GK+IDPL ECL+ W+G P+ +
Sbjct: 651 ETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAPISI 697

The following BLAST results are available for this feature:

BLAST of HG10001355 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570795.1	1.6e-56	86.40	Phenylalanine ammonia-lyase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022986145.1	1.6e-56	86.40	phenylalanine ammonia-lyase-like [Cucurbita maxima]	[more]
XP_022944704.1	1.6e-56	86.40	phenylalanine ammonia-lyase-like [Cucurbita moschata]	[more]
QCZ35118.1	1.6e-56	86.40	phenylalnine ammonia lyase 3 [Cucurbita pepo]	[more]
XP_038900962.1	1.6e-56	88.00	phenylalanine ammonia-lyase-like [Benincasa hispida]	[more]

BLAST of HG10001355 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43052	8.5e-48	70.16	Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis OX=34292 GN=PALG2B PE=3...	[more]
P45735	2.5e-47	69.35	Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera OX=29760 GN=PAL PE=2 SV...	[more]
P45727	1.0e-45	66.94	Phenylalanine ammonia-lyase OS=Persea americana OX=3435 GN=PAL PE=2 SV=1	[more]
P07218	5.2e-45	70.16	Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris OX=3885 PE=...	[more]
P25872	5.2e-45	66.94	Phenylalanine ammonia-lyase OS=Nicotiana tabacum OX=4097 GN=TPA1 PE=2 SV=1	[more]

BLAST of HG10001355 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD92	8.0e-57	86.40	Phenylalanine ammonia-lyase OS=Cucurbita maxima OX=3661 GN=LOC111483977 PE=3 SV=...	[more]
A0A6J1FYU1	8.0e-57	86.40	Phenylalanine ammonia-lyase OS=Cucurbita moschata OX=3662 GN=LOC111449086 PE=3 S...	[more]
A0A4Y5RSS7	8.0e-57	86.40	Phenylalanine ammonia-lyase OS=Cucurbita pepo OX=3663 GN=PAL3 PE=2 SV=1	[more]
A0A0A0KEL3	8.8e-56	85.60	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G147460 PE=3 SV=1	[more]
A0A4Y5RSF5	2.0e-55	84.80	Phenylalanine ammonia-lyase OS=Cucurbita pepo OX=3663 GN=PAL4 PE=2 SV=1	[more]

BLAST of HG10001355 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37040.1	4.1e-45	66.94	PHE ammonia lyase 1	[more]
AT3G53260.1	6.9e-45	65.85	phenylalanine ammonia-lyase 2	[more]
AT3G10340.1	2.0e-36	57.26	phenylalanine ammonia-lyase 4	[more]
AT5G04230.1	9.7e-31	56.07	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	9.7e-31	56.07	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023144	Phenylalanine ammonia-lyase, shielding domain superfamily	GENE3D	1.10.274.20		coord: 6..69 e-value: 2.9E-40 score: 140.5
None	No IPR available	GENE3D	1.20.200.10	Fumarase/aspartase (Central domain)	coord: 70..129 e-value: 2.9E-40 score: 140.5
None	No IPR available	PANTHER	PTHR10362:SF55	AMMONIA-LYASE, PUTATIVE-RELATED	coord: 12..135
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 12..135
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 11..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001355.1	HG10001355.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity