HG10001343 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001343
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	auxin-responsive protein SAUR50-like
Location	Chr09: 16243217 .. 16243624 (-)
RNA-Seq Expression	HG10001343
Synteny	HG10001343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACCGCTGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCCGATTCTGGTCAAGATGAGTGCGATTACGAAGTTGGGGATGACGGATCGACTCCGGTACCGGAAGACGTCAAAGAAGGGCATTTTGCAGTCGTGGCGGTTGACGCTGAGGAGCCGAAACGTTTTGTTGTACCGTTGAGTTGCTTGACGAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAGTATGGATTTGATCATGAAGGGGCGTTGACGGTGCCGTGTCGGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTTGAGGAGGAGGAGGAGAATAGGTGCATTTGGGGATAG

mRNA sequence

ATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACCGCTGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCCGATTCTGGTCAAGATGAGTGCGATTACGAAGTTGGGGATGACGGATCGACTCCGGTACCGGAAGACGTCAAAGAAGGGCATTTTGCAGTCGTGGCGGTTGACGCTGAGGAGCCGAAACGTTTTGTTGTACCGTTGAGTTGCTTGACGAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAGTATGGATTTGATCATGAAGGGGCGTTGACGGTGCCGTGTCGGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTTGAGGAGGAGGAGGAGAATAGGTGCATTTGGGGATAG

Coding sequence (CDS)

ATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACCGCTGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCCGATTCTGGTCAAGATGAGTGCGATTACGAAGTTGGGGATGACGGATCGACTCCGGTACCGGAAGACGTCAAAGAAGGGCATTTTGCAGTCGTGGCGGTTGACGCTGAGGAGCCGAAACGTTTTGTTGTACCGTTGAGTTGCTTGACGAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAGTATGGATTTGATCATGAAGGGGCGTTGACGGTGCCGTGTCGGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTTGAGGAGGAGGAGGAGAATAGGTGCATTTGGGGATAG

Protein sequence

MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEEENRCIWG

Homology

[Close]

BLAST of HG10001343 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEG 60
           MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD STPVPEDVKEG
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDESTPVPEDVKEG 60

Query: 61  HFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA 120
           HFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA
Sbjct: 61  HFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA 120

Query: 121 EEWVEEEEENRCIWG 136
           EEWVEEEEEN CIWG
Sbjct: 121 EEWVEEEEENGCIWG 135

[Close]

BLAST of HG10001343 vs. NCBI nr
Match: XP_004145816.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 130/135 (96.30%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENRCIW 135
           AEEWVEEEEEN CIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of HG10001343 vs. NCBI nr
Match: KAE8646889.1 (hypothetical protein Csa_020692 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.3e-63
Identity = 129/134 (96.27%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENRCI 134
           AEEWVEEEEEN CI
Sbjct: 121 AEEWVEEEEENGCI 134

[Close]

BLAST of HG10001343 vs. NCBI nr
Match: XP_008465358.1 (PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa] >TYK22387.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 130/137 (94.89%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKE 60
           MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEE--EENRCIW 135
           AEEWVEEE  EEN CIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of HG10001343 vs. NCBI nr
Match: XP_022140427.1 (auxin-responsive protein SAUR50-like [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57
Identity = 118/136 (86.76%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKE 60
           MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DYE GDD S T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSE+ERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEWVEEEEENRCIWG 136
           AE+W EEEEE+ CIWG
Sbjct: 121 AEQWGEEEEESGCIWG 136

[Close]

BLAST of HG10001343 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.7e-11
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 5   VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAV 64
           + I KK + + +       L+R  SLG+++  G DE            +P DV +GHF V
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDE----------DCLPLDVPKGHFPV 60

Query: 65  VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC 111
                E   R++VP+S LT+P F  LL+ A EE+GFDH+  LT+PC
Sbjct: 61  YV--GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of HG10001343 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 53  VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCR 112
           +P DV +GHF V     E   R++VP+SCL +PTF  LL+ + EE+GF+H+  + +PC+
Sbjct: 35  LPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQ 91

[Close]

BLAST of HG10001343 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 55  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPS 114
           +DV +G  A+ V    EE +RF+VP+    +P F++LL+ A +EYGFD +G +T+PC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 115 ELERILA 121
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of HG10001343 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.6e-08
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 41  CDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF 100
           C Y   DD    +P+DV +GHF V         R++VP+S L +  F  LL  A EE+GF
Sbjct: 36  CYYNQEDD----LPQDVPKGHFPVYV--GPNRSRYIVPISWLHHSEFQTLLRLAEEEFGF 95

Query: 101 DHEGALTVPC 111
           DH+  LT+PC
Sbjct: 96  DHDMGLTIPC 99

[Close]

BLAST of HG10001343 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 56  DVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHE-GALTVPCRPSE 115
           DV +G+ AV   D  + +RF +P+S L  P+F  LL  A EE+G+DH  G LT+PC+  E
Sbjct: 25  DVPKGYAAVYVGD--KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 116 LERILA 121
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of HG10001343 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 130/135 (96.30%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENRCIW 135
           AEEWVEEEEEN CIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of HG10001343 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 130/137 (94.89%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKE 60
           MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEE--EENRCIW 135
           AEEWVEEE  EEN CIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of HG10001343 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 130/137 (94.89%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKE 60
           MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEE--EENRCIW 135
           AEEWVEEE  EEN CIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of HG10001343 vs. ExPASy TrEMBL
Match: A0A6J1CGW5 (auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011107 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 118/136 (86.76%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKE 60
           MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DYE GDD S T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSE+ERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEWVEEEEENRCIWG 136
           AE+W EEEEE+ CIWG
Sbjct: 121 AEQWGEEEEESGCIWG 136

[Close]

BLAST of HG10001343 vs. ExPASy TrEMBL
Match: A0A6J1K3Y0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 114/124 (91.94%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDA 69
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D EVGDD STPVPEDVKEGHFAVVAVDA
Sbjct: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEGHFAVVAVDA 68

Query: 70  EEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEE- 129
           EEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEW EEEE 
Sbjct: 69  EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWEEEEEN 128

Query: 130 ENRC 133
           ENRC
Sbjct: 129 ENRC 132

[Close]

BLAST of HG10001343 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 65/126 (51.59%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 3   KLVTI---AKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKE 62
           +++TI    KK  GIVKLK  V +L +     +   S +  C  E G D    VP+DVKE
Sbjct: 5   RMITIESPKKKMGGIVKLKNVVERLVQI----KGFSSAKKPCPEEYGRD---CVPKDVKE 64

Query: 63  GHFAVVAVDA--EEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELER 122
           GHFAV+AVD   E  +RFVVPL  L +P F +LLE A EEYGF H+GAL VPCRPS L  
Sbjct: 65  GHFAVIAVDGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRM 123

Query: 123 ILAEEW 124
           IL E+W
Sbjct: 125 ILTEQW 123

[Close]

BLAST of HG10001343 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-19
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 16  KLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRF 75
           K K  + KLQ      R S    + C++E   + ++ +P DVKEGH AV+AV  E  KRF
Sbjct: 4   KFKIFMRKLQICCLFTRFSKRVGNYCEFEEEGNAASMIPSDVKEGHVAVIAVKGERIKRF 63

Query: 76  VVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           V+ L  L  P FLRLLE A EE+GF   G LT+PC+P E+++IL
Sbjct: 64  VLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of HG10001343 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 5   VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAV 64
           + I KK + + +       L+R  SLG+++  G DE            +P DV +GHF V
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDE----------DCLPLDVPKGHFPV 60

Query: 65  VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC 111
                E   R++VP+S LT+P F  LL+ A EE+GFDH+  LT+PC
Sbjct: 61  YV--GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of HG10001343 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-11
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 24  LQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLT 83
           L+R  SLG++  S  ++     GD     +P DV +GHF V         R+V+P+S LT
Sbjct: 19  LKRCSSLGKKQSSEYNDTHEHDGDS----LPLDVPKGHFVVYV--GGNRVRYVLPISFLT 78

Query: 84  NPTFLRLLEAAAEEYGFDHEGALTVPC 111
            P F  LL+ A EE+GFDH   LT+PC
Sbjct: 79  RPEFQLLLQQAEEEFGFDHNMGLTIPC 99

[Close]

BLAST of HG10001343 vs. TAIR 10
Match: AT3G20220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.3 bits (155), Expect = 8.5e-11
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 48  DGSTPVPED--VKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGA 107
           DGS P  +   V  GH AV  V  EE +RFV+P   L  P F  L++  A+E+G+DHEG 
Sbjct: 36  DGSRPARDQNGVPRGHLAVY-VGREERQRFVIPTKYLQYPEFRSLMDEVADEFGYDHEGG 95

Query: 108 LTVPCRPSELERIL 120
           + +PC  S  E IL
Sbjct: 96  IHIPCEESVFEEIL 108

The following BLAST results are available for this feature:

BLAST of HG10001343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902788.1	1.2e-67	98.52	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_004145816.1	2.8e-64	96.30	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
KAE8646889.1	5.3e-63	96.27	hypothetical protein Csa_020692 [Cucumis sativus]	[more]
XP_008465358.1	3.4e-62	94.89	PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 aux...	[more]
XP_022140427.1	2.5e-57	86.76	auxin-responsive protein SAUR50-like [Momordica charantia]	[more]

BLAST of HG10001343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	3.7e-11	37.74	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	2.0e-09	44.07	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	1.7e-08	40.30	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9SL45	6.6e-08	42.86	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P33079	2.5e-07	42.42	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of HG10001343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGI2	1.4e-64	96.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A5D3DFC2	1.7e-62	94.89	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	1.7e-62	94.89	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]
A0A6J1CGW5	1.2e-57	86.76	auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1K3Y0	1.3e-54	91.94	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474...	[more]

BLAST of HG10001343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	1.5e-23	51.59	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	3.8e-19	46.15	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	2.7e-12	37.74	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	8.5e-11	41.38	SAUR-like auxin-responsive protein family	[more]
AT3G20220.1	8.5e-11	44.59	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 39..119 e-value: 9.5E-20 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..130
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001343.1	HG10001343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin