HG10000582 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000582
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Actin-depolymerizing factor
Location	Chr09: 6655388 .. 6656058 (+)
RNA-Seq Expression	HG10000582
Synteny	HG10000582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAAAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCAGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCCGTCTTCGATTTCGACTTCGTCACTGTAGATAATTGCAGAAAAAGCAAGATCTTCTTCATCGCCTGGTATTTTCCGCGATTCGTTTCTGTTTTCTCCTCGATCGCATCCGAATCGTTCAATTCTCTCTGATTGCTTGAATCGTGCTATAAATTTCCTCAAATTCATAATCTCTAATTCTGTTACAGTGTTTGATTAATTAAACGAGTTCTGATCGTAATCGGAATTCGAATTTCTTTAGAGAAACCGTAGCCGATTAATTGAATCGAATACTGTAAATTGAAGGGATCTGAATGTGAAATTGGAACTGAAACCGATCTCGGTTGATTTGGTACAACAGGTCGCCCACCGAATCAAGAATCAGAGCAAAAATTCTATACGCAACTTCAAAGGATGGACTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATGA

mRNA sequence

ATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAAAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCAGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCCGTCTTCGATTTCGACTTCGTCACTGTAGATAATTGCAGAAAAAGCAAGATCTTCTTCATCGCCTGGTCGCCCACCGAATCAAGAATCAGAGCAAAAATTCTATACGCAACTTCAAAGGATGGACTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATGA

Coding sequence (CDS)

ATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAGATGAAATGGAAAAAGGTTCATAGGTATATTGTGTTTAAGATCGATGAAGGATCCAGATTAGTCACCGTCGACAAGGTCGGCGGTCCAGCCGAAAGCTACGATGATCTCACCGCCTCATTGCCGAACGACGACTGTCGATACGCCGTCTTCGATTTCGACTTCGTCACTGTAGATAATTGCAGAAAAAGCAAGATCTTCTTCATCGCCTGGTCGCCCACCGAATCAAGAATCAGAGCAAAAATTCTATACGCAACTTCAAAGGATGGACTGAGGAGAGTGCTGGAAGGAATTCATTACGAAGTTCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATGA

Protein sequence

MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK

Homology

[Close]

BLAST of HG10000582 vs. NCBI nr
Match: XP_004147035.1 (actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin-depolymerizing factor 5-like [Cucumis melo] >KGN61924.1 hypothetical protein Csa_005919 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMGIDVIKDRAK
Sbjct: 132 EMGIDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. NCBI nr
Match: KAA0045728.1 (actin-depolymerizing factor 5-like [Cucumis melo var. makuwa] >TYJ99552.1 actin-depolymerizing factor 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120

Query: 121 EMGIDVIKDRAK 133
           EMGIDVIKDRAK
Sbjct: 121 EMGIDVIKDRAK 132

[Close]

BLAST of HG10000582 vs. NCBI nr
Match: XP_038901914.1 (actin-depolymerizing factor 5-like [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-70
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG+DVIKDRAK
Sbjct: 132 EMGMDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. NCBI nr
Match: KAG6571025.1 (Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 635 MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 694

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPT
Sbjct: 695 AVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPT 754

Query: 121 EMGIDVIKDRAK 133
           EMG+DVIKDRAK
Sbjct: 755 EMGMDVIKDRAK 766

[Close]

BLAST of HG10000582 vs. NCBI nr
Match: XP_022943996.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >KAG7010856.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG+DVIKDRAK
Sbjct: 132 EMGMDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 9.5e-60
Identity = 111/132 (84.09%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 12  MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG D+I+DRAK
Sbjct: 132 EMGFDIIQDRAK 143

[Close]

BLAST of HG10000582 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-58
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL ASLP DDCRY
Sbjct: 10  MWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRY 69

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFD+VTVDNCR SKIFFI WSP  SRIR K++YATSK GLRRVL+G+HYE+QATDPT
Sbjct: 70  AVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPT 129

Query: 121 EMGIDVIKDRAK 133
           EMG D I+DRAK
Sbjct: 130 EMGFDKIQDRAK 141

[Close]

BLAST of HG10000582 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.9e-56
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGGP E Y++L A+LP DDCRY
Sbjct: 12  MNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNC+KSKIFFIAWSPT SRIRAKILYATSK GLRRVL+G+HYEVQATD +
Sbjct: 72  AVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSS 131

Query: 121 EMGIDVIKDRAK 133
           EMG DVI+ RA+
Sbjct: 132 EMGYDVIRGRAQ 143

[Close]

BLAST of HG10000582 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.4e-49
Identity = 87/131 (66.41%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GGPAES+D+  A+LP +DCRY
Sbjct: 12  MGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AV+DFDFVT +NC+KSKIFFIAWSP  SRIRAK+LYATSK+  RR L+G+HYE+QATDPT
Sbjct: 72  AVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPT 131

Query: 121 EMGIDVIKDRA 132
           EM ++V+++RA
Sbjct: 132 EMDLEVLRERA 142

[Close]

BLAST of HG10000582 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.2e-47
Identity = 85/131 (64.89%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++DCRY
Sbjct: 15  MGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRY 74

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHYE+QATDPT
Sbjct: 75  AVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPT 134

Query: 121 EMGIDVIKDRA 132
           E+ ++V+++RA
Sbjct: 135 EVDLEVLRERA 145

[Close]

BLAST of HG10000582 vs. ExPASy TrEMBL
Match: A0A5D3BIJ3 (Actin-depolymerizing factor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001220 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120

Query: 121 EMGIDVIKDRAK 133
           EMGIDVIKDRAK
Sbjct: 121 EMGIDVIKDRAK 132

[Close]

BLAST of HG10000582 vs. ExPASy TrEMBL
Match: A0A0A0LLM1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMGIDVIKDRAK
Sbjct: 132 EMGIDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. ExPASy TrEMBL
Match: A0A1S3C6R0 (actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMGIDVIKDRAK
Sbjct: 132 EMGIDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. ExPASy TrEMBL
Match: A0A6J1JEW6 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG+DVIKDRAK
Sbjct: 132 EMGMDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. ExPASy TrEMBL
Match: A0A6J1FT84 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY
Sbjct: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEGIHYEVQATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG+DVIKDRAK
Sbjct: 132 EMGMDVIKDRAK 143

[Close]

BLAST of HG10000582 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 230.7 bits (587), Expect = 6.7e-61
Identity = 111/132 (84.09%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 12  MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 71

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPT
Sbjct: 72  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 131

Query: 121 EMGIDVIKDRAK 133
           EMG D+I+DRAK
Sbjct: 132 EMGFDIIQDRAK 143

[Close]

BLAST of HG10000582 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 230.7 bits (587), Expect = 6.7e-61
Identity = 111/132 (84.09%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 120

Query: 121 EMGIDVIKDRAK 133
           EMG D+I+DRAK
Sbjct: 121 EMGFDIIQDRAK 132

[Close]

BLAST of HG10000582 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 225.3 bits (573), Expect = 2.8e-59
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           MW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL ASLP DDCRY
Sbjct: 10  MWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRY 69

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AVFDFD+VTVDNCR SKIFFI WSP  SRIR K++YATSK GLRRVL+G+HYE+QATDPT
Sbjct: 70  AVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPT 129

Query: 121 EMGIDVIKDRAK 133
           EMG D I+DRAK
Sbjct: 130 EMGFDKIQDRAK 141

[Close]

BLAST of HG10000582 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 189.1 bits (479), Expect = 2.2e-48
Identity = 85/131 (64.89%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++DCRY
Sbjct: 15  MGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRY 74

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHYE+QATDPT
Sbjct: 75  AVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPT 134

Query: 121 EMGIDVIKDRA 132
           E+ ++V+++RA
Sbjct: 135 EVDLEVLRERA 145

[Close]

BLAST of HG10000582 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 181.4 bits (459), Expect = 4.7e-46
Identity = 80/130 (61.54%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 1   MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 60
           M V+DECK  F+E+K K+ +R+IVFKIDE ++ V ++K+G P E+YDD T+S+P+D+CRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 120
           AV+DFDF T DNC+KSKIFFIAWSP  SR+R+K+LYA+SKD  +R +EGI  E+QATDP+
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPS 127

Query: 121 EMGIDVIKDR 131
           EM +D+IK R
Sbjct: 128 EMSLDIIKGR 137

The following BLAST results are available for this feature:

BLAST of HG10000582 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147035.1	2.6e-70	100.00	actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin...	[more]
KAA0045728.1	2.6e-70	100.00	actin-depolymerizing factor 5-like [Cucumis melo var. makuwa] >TYJ99552.1 actin-...	[more]
XP_038901914.1	5.7e-70	99.24	actin-depolymerizing factor 5-like [Benincasa hispida]	[more]
KAG6571025.1	2.4e-68	97.73	Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943996.1	2.4e-68	97.73	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-de...	[more]

BLAST of HG10000582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	9.5e-60	84.09	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
O49606	4.0e-58	77.27	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q10P87	4.9e-56	77.27	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
Q8SAG3	3.4e-49	66.41	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	3.2e-47	64.89	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of HG10000582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIJ3	1.2e-70	100.00	Actin-depolymerizing factor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LLM1	1.2e-70	100.00	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 ...	[more]
A0A1S3C6R0	1.2e-70	100.00	actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 ...	[more]
A0A6J1JEW6	1.2e-68	97.73	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 P...	[more]
A0A6J1FT84	1.2e-68	97.73	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560...	[more]

BLAST of HG10000582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16700.1	6.7e-61	84.09	actin depolymerizing factor 5	[more]
AT2G16700.2	6.7e-61	84.09	actin depolymerizing factor 5	[more]
AT4G34970.1	2.8e-59	77.27	actin depolymerizing factor 9	[more]
AT2G31200.1	2.2e-48	64.89	actin depolymerizing factor 6	[more]
AT4G00680.1	4.7e-46	61.54	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..132 e-value: 3.9E-49 score: 179.2
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 7..129 e-value: 3.7E-32 score: 110.7
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 1..132 score: 35.792061
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..132 e-value: 8.3E-44 score: 150.6
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..132
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 3..131 e-value: 1.29125E-58 score: 175.823
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 1..132
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000582.1	HG10000582.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding