HG10000545 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTAAAAATGCAAGTTGTGTCAGCAAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAATTTACGTGGGAGAGATTCAAAGAAAGAGATTTATCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAAATCTGCTCAATAGGTCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACAATTCCGTGCAGGGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGA ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTAAAAATGCAAGTTGTGTCAGCAAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAATTTACGTGGGAGAGATTCAAAGAAAGAGATTTATCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAAATCTGCTCAATAGGTCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACAATTCCGTGCAGGGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGA ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTAAAAATGCAAGTTGTGTCAGCAAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAATTTACGTGGGAGAGATTCAAAGAAAGAGATTTATCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAAATCTGCTCAATAGGTCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACAATTCCGTGCAGGGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGA MGIRLPSILLNAKQILKMQVVSARNQSDVPKGHIAIYVGEIQRKRFIVPISYLKHPSFVNLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS Homology
BLAST of HG10000545 vs. NCBI nr
Match: XP_011649278.1 (auxin-responsive protein SAUR21 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 5.5e-46 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of HG10000545 vs. NCBI nr
Match: XP_038901157.1 (auxin-responsive protein SAUR21-like [Benincasa hispida]) HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45 Identity = 90/97 (92.78%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of HG10000545 vs. NCBI nr
Match: XP_038901158.1 (auxin-responsive protein SAUR21-like [Benincasa hispida]) HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45 Identity = 88/97 (90.72%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. NCBI nr
Match: XP_022146171.1 (auxin-responsive protein SAUR21-like [Momordica charantia]) HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45 Identity = 90/97 (92.78%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of HG10000545 vs. NCBI nr
Match: XP_016902145.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99601.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45 Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24 Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.7e-24 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy TrEMBL
Match: A0A5A7TQ57 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001750 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy TrEMBL
Match: A0A6J1CYI0 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015450 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 90/97 (92.78%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy TrEMBL
Match: A0A1S4E2E4 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy TrEMBL
Match: A0A5D3BIN4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001760 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45 Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. ExPASy TrEMBL
Match: A0A0A0LM74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45 Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000545 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26 Identity = 55/98 (56.12%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of HG10000545 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26 Identity = 54/99 (54.55%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of HG10000545 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.6 bits (283), Expect = 8.8e-26 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of HG10000545 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25 Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of HG10000545 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25 Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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