HG10000521 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGTTTGGCAAGAATGGTAAATGCTGTGCAAAATATTAGACTTTCTTCTCTAACAACACACCACGGATCATCGTCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCCAGAAGAAGCGGTTTGTGATTCCTATTGCTTACTTGAACGAGCCATTTTTCAAGGACCTGCTAAATCAAGTTGAAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTCACTATTCCTTGCAGCGATAATACATTCATGGATCTCATCTCTCGTCTGAATGAGTCATAA ATGGGTTTCCGTTTGGCAAGAATGGTAAATGCTGTGCAAAATATTAGACTTTCTTCTCTAACAACACACCACGGATCATCGTCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCCAGAAGAAGCGGTTTGTGATTCCTATTGCTTACTTGAACGAGCCATTTTTCAAGGACCTGCTAAATCAAGTTGAAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTCACTATTCCTTGCAGCGATAATACATTCATGGATCTCATCTCTCGTCTGAATGAGTCATAA ATGGGTTTCCGTTTGGCAAGAATGGTAAATGCTGTGCAAAATATTAGACTTTCTTCTCTAACAACACACCACGGATCATCGTCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCCAGAAGAAGCGGTTTGTGATTCCTATTGCTTACTTGAACGAGCCATTTTTCAAGGACCTGCTAAATCAAGTTGAAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTCACTATTCCTTGCAGCGATAATACATTCATGGATCTCATCTCTCGTCTGAATGAGTCATAA MGFRLARMVNAVQNIRLSSLTTHHGSSSIRKGYCAVYVGESQKKRFVIPIAYLNEPFFKDLLNQVEEEFGYNHPMGGLTIPCSDNTFMDLISRLNES Homology
BLAST of HG10000521 vs. NCBI nr
Match: XP_038902470.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 196.8 bits (499), Expect = 8.5e-47 Identity = 93/97 (95.88%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of HG10000521 vs. NCBI nr
Match: XP_008457943.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045665.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99618.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000521 vs. NCBI nr
Match: KGN61865.1 (hypothetical protein Csa_006212 [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 6.7e-44 Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of HG10000521 vs. NCBI nr
Match: KAG6605034.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.9 bits (468), Expect = 3.3e-43 Identity = 85/97 (87.63%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000521 vs. NCBI nr
Match: XP_022146118.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41 Identity = 80/97 (82.47%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 9.8e-22 Identity = 52/98 (53.06%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21 Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21 Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.9e-21 Identity = 45/79 (56.96%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 8.3e-21 Identity = 46/77 (59.74%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy TrEMBL
Match: A0A5D3BN78 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001920 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy TrEMBL
Match: A0A1S3C683 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497507 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy TrEMBL
Match: A0A0A0LIY4 (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_2G258610 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.3e-44 Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy TrEMBL
Match: A0A6J1CXQ4 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015414 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41 Identity = 80/97 (82.47%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of HG10000521 vs. ExPASy TrEMBL
Match: A0A6J1CYP6 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015412 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36 Identity = 73/96 (76.04%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of HG10000521 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24 Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of HG10000521 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 102.8 bits (255), Expect = 1.6e-22 Identity = 49/98 (50.00%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of HG10000521 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-22 Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of HG10000521 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-22 Identity = 45/79 (56.96%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of HG10000521 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.9 bits (250), Expect = 5.9e-22 Identity = 46/77 (59.74%), Postives = 64/77 (83.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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