HG10000293 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10000293
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMembrin
LocationChr09: 3334949 .. 3336983 (+)
RNA-Seq ExpressionHG10000293
SyntenyHG10000293
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGGTTCTTCTTCCATTCCCCACCTTTGCGTTTTTTCTGATTGAATTTGTAATTCTACGGTTTCCATGTCATCTTCGGTCGAATTTTGAATTAGATGGTTTTTATTTGTTTTTCTTTTTTGGGTTTTATTCAAAATTGCTCATTCTTTCTGAATTTCTTGTTTTGTTAGTTTATTCAAATGTGATGGATGTTATGTCCTCCTCTTTGTCTGTTGTGACTGTTTGTTTCCTTGGAGTTGAATCATTATTTCTTTCATTCAAGGGAAAAGAGAAAAATGAAATGGGGTGGTCTTTTAGATCCTGGATTGAATATGGGATTGGGAATTAATTGTAATTATGGATGGTCTTACGACTTATGTCCAATTTGATAATGCCTAACCTTGATGTGATACAACTGGGAATTGTTCTGCAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTGTATGTACTCATTTTAGCTACTTGTGGCTGAACTCCTTCTTTAGCCTTTCATTTAAGTGGTCTTTGGCTTTGCTTTTGTAGAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGGTGTGTGTTTTTATTTGCTGAGGCTACCGTTAACTGTTAAAACAATATTTGAAGACTATGGATGCATTCCCTTTAAATGTGAATTTGGTGAAGATTCTATACTATATTCATAGTCTCTTGTTGGTCTAGGAGATAGCTGCAGGTATGACGTCTTTGAGTTGTTTTGGAAGCATTGTTTCAATTTTTGGAAGTTGTACTCTACATATGAATATTTACTAGACGTGTCTATATTTTGGCAGTTATAGAGTCTCCTGGAGTAAAAAGCACTTTGATTGGCTTGAGAACATGTGCATTATGCTAATTAATTATTCTAAAAGAATGTTTGACTCACAGTTTTAATAAGTTTTAGTTGATGAAGTCCAACTTCATGTGACCTATGATTAGACAGCGTGGAAAATATGTAATATAGAATTTAGGCGGGCTTGAGTTGAGTTTGCTGTTTTAGTTTGTAACTAGTATCTAGGATTGGATAAAAGAATCTTTGTAATACAAATTTATGGTCTGGGAGATTAGCAATTTTATAACCTAAGATGATGCAAATCTAAACTTATGGCCTGACATTCCTCAAAGGGTTTTGGATGGTGCCATGATCATCATTAATTCTGTACAAAAAGACTTGATTATCTCACTAAACTAAACTACCTTCTTAGTATCATTTGATTGTTTCTCAGACGGAGTAGAACATGCAATTATGAACCGCGGCAGGTTGAAACGAAATCCACAGTTACTTTACTATAGCCTTTGTTGGCTTTACTGCATTGCATTTTGCCCCCCCTCCTATTCATTCATTTCTCTCTCTCATGTTCATTCATTTGTTTTTGTGGTTCAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGGTGA

mRNA sequence

ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGGTGA

Coding sequence (CDS)

ATGTCGGCCTTGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCAGAGTGCGAAGAGGCTGCTGTTGAGGACTAGGGATGGGCTTGAGAAGCTGGAGCGTCTTGAGTACACGGCGGCTAGCGGCTTCGATTCCGCCGATCTTTCCTTCTCGATCAAGAGGGATATTACTCAGATCCAGTCTCTCTGTGTGGAGATGGATAGGCTCTGGCGGTCTGTTGCGGCGAAGTCCCAACGTGATTTGTGGAAAAGAAAGGTGGAACAGGTTGCTGAGGAGGCTGATTCTATGAAACAAAGTTTGGACAAGTATTTTCTTAGAAACCAGAAGCGGACGATGGAAGCGAAGGAGAGGGCAGAATTGCTTGGAAGAGCTAGTGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCTATGTACTCGGTTCGAAATTCATCACGGATGTTAGAGGAAGCTAGTGCAACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAGAGGGACCGCTTAAAGAGAGCACAAAGGAAGGCACTAGATGTCCTTAACACAGTGGGGCTCTCCAGCTATGTACTGAAACTCATTGAGAGACGGCACCGAGTTGATAATTGGATTAAATATGCAGGCATGATTTTAACCATAGTAATTGTGTTTGTTTTTGTTCGATGGGTACGGTGA

Protein sequence

MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR
Homology
BLAST of HG10000293 vs. NCBI nr
Match: XP_038902778.1 (membrin-11-like [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.6e-108
Identity = 212/222 (95.50%), Postives = 216/222 (97.30%), Query Frame = 0

Query: 17  GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVE 76
           GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASG DS +LSFSIKRDITQIQSLCVE
Sbjct: 42  GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGLDSPELSFSIKRDITQIQSLCVE 101

Query: 77  MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 136
           MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKR MEAKER ELLGRAS
Sbjct: 102 MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMMEAKERTELLGRAS 161

Query: 137 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 196
           GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN
Sbjct: 162 GDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 221

Query: 197 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           TVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VFVFVRW+R
Sbjct: 222 TVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFVFVRWIR 263

BLAST of HG10000293 vs. NCBI nr
Match: XP_004149111.1 (membrin-11 [Cucumis sativus] >KGN53918.1 hypothetical protein Csa_019142 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 215/238 (90.34%), Postives = 221/238 (92.86%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSALE          GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEY+AASG DS +LS
Sbjct: 1   MSALE----------GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
           FSIK+DITQIQSLCVEMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK
Sbjct: 61  FSIKKDITQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R  EAKERAELLGRASGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQ
Sbjct: 121 RMTEAKERAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF FVRWVR
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRWVR 228

BLAST of HG10000293 vs. NCBI nr
Match: XP_022924931.1 (membrin-11-like [Cucurbita moschata])

HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-107
Identity = 215/238 (90.34%), Postives = 223/238 (93.70%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSA+E      GGGGGGGGGTLSEIY SAKRLLLRTRD LEKLERLEYTAASG DS DLS
Sbjct: 1   MSAME------GGGGGGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASGMDSPDLS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
            SIKRDI QIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQ+AEEADSMKQSLDKYFLRNQK
Sbjct: 61  SSIKRDIIQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQIAEEADSMKQSLDKYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R MEAKERA+L+GRA+GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQ
Sbjct: 121 RMMEAKERADLVGRANGDSAHILRIFDDEAQAMSSVRNSSRMLEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VFVFVRW+R
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFVFVRWLR 232

BLAST of HG10000293 vs. NCBI nr
Match: XP_038883832.1 (membrin-11-like [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 209/224 (93.30%), Postives = 217/224 (96.88%), Query Frame = 0

Query: 15  GGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLC 74
           GGGGG TLSEIYQSAKRLLL+TRDGLEKLERLEYTAASG DS ++SFSIKRDITQIQSLC
Sbjct: 6   GGGGGSTLSEIYQSAKRLLLKTRDGLEKLERLEYTAASGMDSPEISFSIKRDITQIQSLC 65

Query: 75  VEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGR 134
           VEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKR  EAKERAELLGR
Sbjct: 66  VEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMTEAKERAELLGR 125

Query: 135 ASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDV 194
           A+GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDV
Sbjct: 126 ANGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDV 185

Query: 195 LNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           LNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF+FV+WVR
Sbjct: 186 LNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFIFVQWVR 229

BLAST of HG10000293 vs. NCBI nr
Match: XP_023518923.1 (membrin-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 208/223 (93.27%), Postives = 215/223 (96.41%), Query Frame = 0

Query: 16  GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCV 75
           GGGGGTLSEIY SAKRLLLRTRD LEKLERLEYTAASG DS DLS SIKRDITQIQSLCV
Sbjct: 6   GGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASGMDSPDLSSSIKRDITQIQSLCV 65

Query: 76  EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 135
           EMDRLWRSVAAKSQRDLWKRKVEQ+AEEADSMKQSLDKYFLRNQKR MEAKERA+L+GRA
Sbjct: 66  EMDRLWRSVAAKSQRDLWKRKVEQIAEEADSMKQSLDKYFLRNQKRMMEAKERADLVGRA 125

Query: 136 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 195
           +GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL
Sbjct: 126 NGDSAHILRIFDDEAQAMSSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 185

Query: 196 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           NTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VFVFVRW+R
Sbjct: 186 NTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFVFVRWLR 228

BLAST of HG10000293 vs. ExPASy Swiss-Prot
Match: Q9SJL6 (Membrin-11 OS=Arabidopsis thaliana OX=3702 GN=MEMB11 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.4e-79
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 0

Query: 18  GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 77
           GGG+LS++Y SAKR+LL+ RDG+E+LER E   +S  DS DL+ S+KRDIT+++SLC  M
Sbjct: 8   GGGSLSDVYSSAKRILLKARDGIERLERFE---SSSMDSPDLASSVKRDITEVRSLCSNM 67

Query: 78  DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 137
           D LWRS+  KSQRDLW+RK EQV EEA+ +  SL+KY  RNQ++ +EAKERA+LLGRASG
Sbjct: 68  DTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASG 127

Query: 138 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 197
           + AHIL+IFD+EAQAM SV+NS RMLEE+ ++G AIL KY+EQRDRLK AQRKALDVLNT
Sbjct: 128 EGAHILQIFDEEAQAMSSVKNSKRMLEESFSSGVAILSKYAEQRDRLKSAQRKALDVLNT 187

Query: 198 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           VGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 188 VGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225

BLAST of HG10000293 vs. ExPASy Swiss-Prot
Match: Q9FK28 (Membrin-12 OS=Arabidopsis thaliana OX=3702 GN=MEMB12 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.4e-75
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 0

Query: 17  GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVE 76
           G  G LSE+Y SAKR+LLR R+G+EKLER +       D  DL+ S+KRDIT++QSLC  
Sbjct: 4   GTVGGLSEVYSSAKRILLRARNGIEKLERFD------SDPTDLASSVKRDITEVQSLCSN 63

Query: 77  MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 136
           MD LWRS+  KSQRDLW+RK EQV EEA+ + QSL+KY  RNQ++ +EAKERA+LLGR S
Sbjct: 64  MDGLWRSIPVKSQRDLWRRKSEQVGEEAEYLNQSLEKYMWRNQRKMLEAKERADLLGRGS 123

Query: 137 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 196
           G+ AHIL+IFD+EAQ M SV+NS RMLE++  +G AIL KY+EQRDRLK AQRKALDVLN
Sbjct: 124 GEGAHILQIFDEEAQGMNSVKNSKRMLEDSFQSGVAILSKYAEQRDRLKSAQRKALDVLN 183

Query: 197 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           TVGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 184 TVGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 219

BLAST of HG10000293 vs. ExPASy Swiss-Prot
Match: O35166 (Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-11
Identity = 55/218 (25.23%), Postives = 111/218 (50.92%), Query Frame = 0

Query: 22  LSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEMDRLW 81
           +  +YQ   + +   +  + +LER +  +    ++ ++  SI++  + ++ L      + 
Sbjct: 1   MEPLYQQTNKQVQEIQSHMGRLERADKQSVHLVEN-EIQASIEQIFSHLERL-----EIL 60

Query: 82  RSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGR--ASGDS 141
            S    ++R   K +V+Q+  +   ++ +L  +  R Q R  + ++R ELL R   + DS
Sbjct: 61  SSKEPLNRRQNAKLRVDQLKYDVQHLQTALRNFQHRRQVREQQERQRDELLSRTFTTNDS 120

Query: 142 AHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVG 201
              + + D+  Q   S+ N    +++    G +IL     QR  LK  Q+K LD+ N +G
Sbjct: 121 DTTIPM-DESLQFNSSLHNIHHGMDDLIGGGHSILEGLRAQRLTLKGTQKKILDIANMLG 180

Query: 202 LSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWV 238
           LS+ V++LIE+R   D +    GM+LT  ++F+ V+++
Sbjct: 181 LSNTVMRLIEKRAFQDKYFMIGGMLLTCAVMFLVVQYL 211

BLAST of HG10000293 vs. ExPASy Swiss-Prot
Match: Q9VRL2 (Probable Golgi SNAP receptor complex member 2 OS=Drosophila melanogaster OX=7227 GN=Membrin PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-10
Identity = 61/217 (28.11%), Postives = 105/217 (48.39%), Query Frame = 0

Query: 22  LSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEMDRLW 81
           +  +Y     ++       ++L +L     S  +S D+   I+  ITQ  + C  +D L 
Sbjct: 1   MESLYHQTNNVVKDIERDFQRLSQL-----SAQESLDVENGIQLKITQANANCDRLDVLL 60

Query: 82  RSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLG-RASGDSA 141
             V   SQR   K +V+Q+  +   ++ SL     R Q+R  E  ER +LL  R + +SA
Sbjct: 61  YKV-PPSQRQSSKLRVDQLKYDLRHLQTSLQTARERRQRRMQEISEREQLLNHRFTANSA 120

Query: 142 HILRI---FDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 201
                    D E Q    + N+ R +++  A+G  IL     QR  L  A ++   + +T
Sbjct: 121 QPEETRLQLDYELQHHTQLGNAHRGVDDMIASGSGILESLISQRMTLGGAHKRIQAIGST 180

Query: 202 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFV 235
           +GLS++ +KLIERR   D  I   G+++T++I+ + +
Sbjct: 181 LGLSNHTMKLIERRLVEDRRIFIGGVVVTLLIIALII 211

BLAST of HG10000293 vs. ExPASy Swiss-Prot
Match: O35165 (Golgi SNAP receptor complex member 2 OS=Rattus norvegicus OX=10116 GN=Gosr2 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 52/177 (29.38%), Postives = 94/177 (53.11%), Query Frame = 0

Query: 63  IKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRT 122
           I+  I QI S    ++ L  S    ++R   K +V+Q+  +   ++ +L  +  R Q + 
Sbjct: 37  IQASIDQIFSHLERLEIL-SSKEPPNRRQNAKLRVDQLKYDVQHLQTALRNFQHRRQAKE 96

Query: 123 MEAKERAELLGR--ASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 182
            + ++R ELL R   + DS   + + D+  Q   S++N    +++    G +IL     Q
Sbjct: 97  QQERQRDELLSRTFTTNDSDTTIPM-DESLQFNSSLQNIHHGMDDLIGGGHSILEGLRAQ 156

Query: 183 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWV 238
           R  LK  Q+K LD+ N +GLS+ V++LIE+R   D +    GM+LT  ++F+ V+++
Sbjct: 157 RLTLKGTQKKILDIANMLGLSNTVMRLIEKRAFQDKYFMIGGMLLTCAVMFLVVQYL 211

BLAST of HG10000293 vs. ExPASy TrEMBL
Match: A0A0A0KWL2 (Membrin OS=Cucumis sativus OX=3659 GN=Csa_4G188920 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107
Identity = 215/238 (90.34%), Postives = 221/238 (92.86%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSALE          GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEY+AASG DS +LS
Sbjct: 1   MSALE----------GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAASGMDSPELS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
           FSIK+DITQIQSLCVEMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK
Sbjct: 61  FSIKKDITQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R  EAKERAELLGRASGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQ
Sbjct: 121 RMTEAKERAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF FVRWVR
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRWVR 228

BLAST of HG10000293 vs. ExPASy TrEMBL
Match: A0A6J1EAT9 (Membrin OS=Cucurbita moschata OX=3662 GN=LOC111432331 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 215/238 (90.34%), Postives = 223/238 (93.70%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSA+E      GGGGGGGGGTLSEIY SAKRLLLRTRD LEKLERLEYTAASG DS DLS
Sbjct: 1   MSAME------GGGGGGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASGMDSPDLS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
            SIKRDI QIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQ+AEEADSMKQSLDKYFLRNQK
Sbjct: 61  SSIKRDIIQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQIAEEADSMKQSLDKYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R MEAKERA+L+GRA+GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQ
Sbjct: 121 RMMEAKERADLVGRANGDSAHILRIFDDEAQAMSSVRNSSRMLEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VFVFVRW+R
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFVFVRWLR 232

BLAST of HG10000293 vs. ExPASy TrEMBL
Match: A0A6J1GEH7 (Membrin OS=Cucurbita moschata OX=3662 GN=LOC111453444 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.3e-106
Identity = 214/238 (89.92%), Postives = 218/238 (91.60%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSALE          GGGGGTLSEIY SAKRLLLRTRD LEKLERLEYTAAS  DS+DLS
Sbjct: 1   MSALE----------GGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASSMDSSDLS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
            SIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLD YFLRNQK
Sbjct: 61  TSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDNYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R MEAKERAELLGRA+GDSAHILRIFDDEAQAM SVRNSSRM+EEASATGEAILFKYSEQ
Sbjct: 121 RMMEAKERAELLGRANGDSAHILRIFDDEAQAMNSVRNSSRMIEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV VFVFVRWVR
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNTVLKLIERRHRVDNWIKYAGMILTIVAVFVFVRWVR 228

BLAST of HG10000293 vs. ExPASy TrEMBL
Match: A0A6J1HN08 (Membrin OS=Cucurbita maxima OX=3661 GN=LOC111466100 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.6e-106
Identity = 208/223 (93.27%), Postives = 214/223 (95.96%), Query Frame = 0

Query: 16  GGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCV 75
           GGGGGTLSEIY SAKRLLLRTRD LEKLERLEYTAASG DS DLS SIKRDITQIQSLCV
Sbjct: 6   GGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASGMDSPDLSSSIKRDITQIQSLCV 65

Query: 76  EMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRA 135
           EMDRLWRSVAAKSQRDLWKRKVEQ+AEEADSMKQSLDKYFLRNQKR MEAKERA+L+GRA
Sbjct: 66  EMDRLWRSVAAKSQRDLWKRKVEQIAEEADSMKQSLDKYFLRNQKRMMEAKERADLVGRA 125

Query: 136 SGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 195
            GDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL
Sbjct: 126 KGDSAHILRIFDDEAQAMSSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVL 185

Query: 196 NTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           NTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VFVFVRW+R
Sbjct: 186 NTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFVFVRWLR 228

BLAST of HG10000293 vs. ExPASy TrEMBL
Match: A0A1S3B4P2 (Membrin OS=Cucumis melo OX=3656 GN=LOC103485998 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.1e-104
Identity = 209/231 (90.48%), Postives = 215/231 (93.07%), Query Frame = 0

Query: 1   MSALEEGGGGGGGGGGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLS 60
           MSALE          GGGGGTLSEIYQSA+R LLRTRDGLEKLERLEYTAASG DS +LS
Sbjct: 1   MSALE----------GGGGGTLSEIYQSARRQLLRTRDGLEKLERLEYTAASGMDSPELS 60

Query: 61  FSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120
           FSIK+DITQIQSLCVEMDRLWRS+AAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK
Sbjct: 61  FSIKKDITQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQK 120

Query: 121 RTMEAKERAELLGRASGDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQ 180
           R MEAKERAELLGRASGDSAHILRIFDDEAQAM SVRNSSRMLEEASATGEAILFKYSEQ
Sbjct: 121 RMMEAKERAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQ 180

Query: 181 RDRLKRAQRKALDVLNTVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVF 232
           RDRLKRAQRKALDVLNTVGLS+ VLKLIERRHRVDNWIKYAGMILTIV+VF
Sbjct: 181 RDRLKRAQRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVF 221

BLAST of HG10000293 vs. TAIR 10
Match: AT2G36900.1 (membrin 11 )

HSP 1 Score: 295.0 bits (754), Expect = 5.2e-80
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 0

Query: 18  GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 77
           GGG+LS++Y SAKR+LL+ RDG+E+LER E   +S  DS DL+ S+KRDIT+++SLC  M
Sbjct: 8   GGGSLSDVYSSAKRILLKARDGIERLERFE---SSSMDSPDLASSVKRDITEVRSLCSNM 67

Query: 78  DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 137
           D LWRS+  KSQRDLW+RK EQV EEA+ +  SL+KY  RNQ++ +EAKERA+LLGRASG
Sbjct: 68  DTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASG 127

Query: 138 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 197
           + AHIL+IFD+EAQAM SV+NS RMLEE+ ++G AIL KY+EQRDRLK AQRKALDVLNT
Sbjct: 128 EGAHILQIFDEEAQAMSSVKNSKRMLEESFSSGVAILSKYAEQRDRLKSAQRKALDVLNT 187

Query: 198 VGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           VGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 188 VGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225

BLAST of HG10000293 vs. TAIR 10
Match: AT5G50440.1 (membrin 12 )

HSP 1 Score: 281.6 bits (719), Expect = 6.0e-76
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 0

Query: 17  GGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVE 76
           G  G LSE+Y SAKR+LLR R+G+EKLER +       D  DL+ S+KRDIT++QSLC  
Sbjct: 4   GTVGGLSEVYSSAKRILLRARNGIEKLERFD------SDPTDLASSVKRDITEVQSLCSN 63

Query: 77  MDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRAS 136
           MD LWRS+  KSQRDLW+RK EQV EEA+ + QSL+KY  RNQ++ +EAKERA+LLGR S
Sbjct: 64  MDGLWRSIPVKSQRDLWRRKSEQVGEEAEYLNQSLEKYMWRNQRKMLEAKERADLLGRGS 123

Query: 137 GDSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLN 196
           G+ AHIL+IFD+EAQ M SV+NS RMLE++  +G AIL KY+EQRDRLK AQRKALDVLN
Sbjct: 124 GEGAHILQIFDEEAQGMNSVKNSKRMLEDSFQSGVAILSKYAEQRDRLKSAQRKALDVLN 183

Query: 197 TVGLSSYVLKLIERRHRVDNWIKYAGMILTIVIVFVFVRWVR 239
           TVGLS+ VL+LIERR+RVD WIKYAGMI T+VI+++F+RW R
Sbjct: 184 TVGLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 219

BLAST of HG10000293 vs. TAIR 10
Match: AT2G36900.2 (membrin 11 )

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-73
Identity = 139/204 (68.14%), Postives = 172/204 (84.31%), Query Frame = 0

Query: 18  GGGTLSEIYQSAKRLLLRTRDGLEKLERLEYTAASGFDSADLSFSIKRDITQIQSLCVEM 77
           GGG+LS++Y SAKR+LL+ RDG+E+LER E   +S  DS DL+ S+KRDIT+++SLC  M
Sbjct: 8   GGGSLSDVYSSAKRILLKARDGIERLERFE---SSSMDSPDLASSVKRDITEVRSLCSNM 67

Query: 78  DRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRTMEAKERAELLGRASG 137
           D LWRS+  KSQRDLW+RK EQV EEA+ +  SL+KY  RNQ++ +EAKERA+LLGRASG
Sbjct: 68  DTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASG 127

Query: 138 DSAHILRIFDDEAQAMYSVRNSSRMLEEASATGEAILFKYSEQRDRLKRAQRKALDVLNT 197
           + AHIL+IFD+EAQAM SV+NS RMLEE+ ++G AIL KY+EQRDRLK AQRKALDVLNT
Sbjct: 128 EGAHILQIFDEEAQAMSSVKNSKRMLEESFSSGVAILSKYAEQRDRLKSAQRKALDVLNT 187

Query: 198 VGLSSYVLKLIERRHRVDNWIKYA 222
           VGLS+ VL+LIERR+RVD WIKYA
Sbjct: 188 VGLSNSVLRLIERRNRVDTWIKYA 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902778.15.6e-10895.50membrin-11-like [Benincasa hispida][more]
XP_004149111.12.1e-10790.34membrin-11 [Cucumis sativus] >KGN53918.1 hypothetical protein Csa_019142 [Cucumi... [more]
XP_022924931.13.6e-10790.34membrin-11-like [Cucurbita moschata][more]
XP_038883832.11.4e-10693.30membrin-11-like [Benincasa hispida][more]
XP_023518923.11.5e-10593.27membrin-11-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9SJL67.4e-7967.42Membrin-11 OS=Arabidopsis thaliana OX=3702 GN=MEMB11 PE=1 SV=1[more]
Q9FK288.4e-7565.77Membrin-12 OS=Arabidopsis thaliana OX=3702 GN=MEMB12 PE=2 SV=1[more]
O351665.0e-1125.23Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=2[more]
Q9VRL22.5e-1028.11Probable Golgi SNAP receptor complex member 2 OS=Drosophila melanogaster OX=7227... [more]
O351651.6e-0929.38Golgi SNAP receptor complex member 2 OS=Rattus norvegicus OX=10116 GN=Gosr2 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0KWL21.0e-10790.34Membrin OS=Cucumis sativus OX=3659 GN=Csa_4G188920 PE=3 SV=1[more]
A0A6J1EAT91.7e-10790.34Membrin OS=Cucurbita moschata OX=3662 GN=LOC111432331 PE=3 SV=1[more]
A0A6J1GEH77.3e-10689.92Membrin OS=Cucurbita moschata OX=3662 GN=LOC111453444 PE=3 SV=1[more]
A0A6J1HN089.6e-10693.27Membrin OS=Cucurbita maxima OX=3661 GN=LOC111466100 PE=3 SV=1[more]
A0A1S3B4P23.1e-10490.48Membrin OS=Cucumis melo OX=3656 GN=LOC103485998 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G36900.15.2e-8067.42membrin 11 [more]
AT5G50440.16.0e-7665.77membrin 12 [more]
AT2G36900.21.6e-7368.14membrin 11 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027027GOSR2/Membrin/Bos1PIRSFPIRSF028865Membrin-2coord: 22..238
e-value: 2.5E-66
score: 221.5
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 149..211
e-value: 1.8E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 15..238
NoneNo IPR availablePANTHERPTHR21230:SF71MEMBRINcoord: 15..238
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 153..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10000293.1HG10000293.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0006906 vesicle fusion
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0012507 ER to Golgi transport vesicle membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031902 late endosome membrane
cellular_component GO:0031201 SNARE complex
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0000149 SNARE binding