HG10000165 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCACGACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGTTTGTTGAGATTAGTGGGGCAAATCATGTTATTGAAGAAATTGGGGTGGGGGAGATGATATGCAGTGCGTGGTTGAGTTTGTGCTTTTGGCCATTTTTGAAGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGACTTTATTGTTTGTGTACTTTGCGTTAAAGAACTAA ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCACGACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGACTTTATTGTTTGTGTACTTTGCGTTAAAGAACTAA ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCACGACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGACTTTATTGTTTGTGTACTTTGCGTTAAAGAACTAA MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGNVCKGRFEIPWPTLCKSIALTLLFVYFALKN Homology
BLAST of HG10000165 vs. NCBI nr
Match: XP_038902592.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20 Identity = 65/116 (56.03%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of HG10000165 vs. NCBI nr
Match: XP_038902591.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20 Identity = 65/116 (56.03%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of HG10000165 vs. NCBI nr
Match: XP_023512253.1 (cellulose synthase-like protein H1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 60/116 (51.72%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of HG10000165 vs. NCBI nr
Match: XP_022944069.1 (cellulose synthase-like protein H1 [Cucurbita moschata]) HSP 1 Score: 93.6 bits (231), Expect = 8.5e-16 Identity = 59/114 (51.75%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of HG10000165 vs. NCBI nr
Match: KAG6570895.1 (Cellulose synthase-like protein H1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15 Identity = 58/114 (50.88%), Postives = 65/114 (57.02%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy Swiss-Prot
Match: Q339N5 (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH1 PE=2 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 2.6e-04 Identity = 31/119 (26.05%), Postives = 51/119 (42.86%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy TrEMBL
Match: A0A6J1FVZ4 (cellulose synthase-like protein H1 OS=Cucurbita moschata OX=3662 GN=LOC111448620 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.1e-16 Identity = 59/114 (51.75%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy TrEMBL
Match: A0A6J1CHE2 (cellulose synthase-like protein H1 OS=Momordica charantia OX=3673 GN=LOC111011206 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.2e-13 Identity = 55/111 (49.55%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy TrEMBL
Match: A0A6J1CI91 (cellulose synthase-like protein H1 OS=Momordica charantia OX=3673 GN=LOC111011183 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11 Identity = 51/112 (45.54%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy TrEMBL
Match: A0A6J1FV74 (cellulose synthase-like protein H1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448395 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11 Identity = 51/110 (46.36%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of HG10000165 vs. ExPASy TrEMBL
Match: A0A6J1FXB7 (cellulose synthase-like protein H1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448395 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11 Identity = 51/110 (46.36%), Postives = 59/110 (53.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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