Cucsat.G9292 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9292
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor bHLH25-like
Location	ctg1658: 689032 .. 691748 (-)
RNA-Seq Expression	Cucsat.G9292
Synteny	Cucsat.G9292

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCCACAAAACAACAAAAAGAAGAGGAAAATAATTGCAAATCAGAACTATCATTTTGTCAGCTAAGAGTGACGAATTTATTAATTTCTTTAATCTCTTTCAAGACTTTCTTTAATTTGACAGCAAAATCAATTTTTCTCCTGATTCACATATGGCACAAACTCAACCCCGTGAGAAACAGAGAGCAACTGTTCAAAAATCTACAAATTAGCCATTGACAGTTGAACAATAAAGGTTGAAAAAAGCCTCTCCATGTCTTTTCCCTTTCTGGGGTTCGACAAATTCAAGCTTTTCGCCATTACTGAGGTGAGAAGAAACAACTTTATTGCCTCTTTTTTTTTTTGTTTTTGTTGCAATCTCTTGTTTTCCCTTTTTCTGAAAATGGGTTCTTGTTTACTTTAATGGGTTTCTTTATAATTGGGTTTAATGGGTGTTTGGAGATTCTCCATTGTTGTAGGACTGTTCATTCTGTTGTAGCTTTTGATGGGAAGTGGAGAACGTTAGGTTGGTGAATTTACTTAGGTTATGCCTTTTTCTTGTAGTTCAGAGGATTTGTTTGACAAGTTTTGTTTGAAGAAGAAGAAGCTTTTTGGATGGAGAAATCTTCTATGGTGGTTTTTTCTGAGATGGTAAGAGGATTTGATGAACTGAATGAATGCTACTTTAATATATTCTTTCTTAAGAATATACTGTAACCTGTCCACCCAAGCTTTTGGATGTACTAATTTCATCATAGTATCTATGTATCAGAGTAGGAGTTCCTGTGTTCGAATCCTGTTGTTTTTTTTCCTATTCATATTAGTAATCACTAGTTGGATTTTCTGCTAATTTGGAATATGTTACGTGTGTGTGTACATACCTTAAATGAACTCGAGTTTTCGGGTTTAGTTTTTGGAAATGTTTGGATTAGGAAAATGAAATTAGGCATTGATGAAGGTTACTTTTCTTCTTTTTTAGGGAATGGAGGATAATGGCTTTGTCAATCAGTGGCACAAGAGCTCAATGGATGATCTTGGTTTGCACCCATTAGCAGCTGCTTTTGGGGAGAATTTGCAGCATTCTTATGATCAATCAAATATTGATCAGAAGGCTTCTTTAAACCATTCTCACAATGCCATACTTGGGTATATGAAACAGCTCAAGAGTGATGGGTGGAGTTCATACCAAACAACTAATCATTTACCGAACTCACAAGTCGTTGCTTACCCAACTGTATCTGTTTCGGCTTCTAACTACATGAACCAAATGGATTTCTCTAGGCCAAAAGAGGAGGTTGTGTGTCCTCAGAGTATTAGCAACCTCCCTTCTGATATGTTGATTTCTCAGGACTCATTAGCCCATCAAAGCCACACAACCAAGTCGAATCGTGGAACAAGAAGTCCCTCTAGAAACAGTAGAATCCCCCAGGCTCAAGATCATATTCTTGCAGAGCGGAGACGACGAGAGAAGCTCAGCCAGCGATTTATTGCTTTGTCTGCTATAGTTCCTGGCCTAAAGAAGGTGTACATCATAGGTTTTTCTCCCTTGCTGTTCTTTTAATTCTAGAGTTCTTTGCATCGAAAGTTGATCCGTTTCAGAAACGGAAAGAAGCTTCTTAACTCTGTTATTTACCTTGCTGATAGATGGACAAGGCTTCAGTTCTTGGAGATGCCATTAAGTACCTGAAACAACTTCAAGAGAAAGTGAAGATACTAGAGGAACAAACCCGCAGGAAAGACATTGAGTCCGTGGTATTTGTCAAGAAATCCCATGTTTTCCCTGATGGAAATGACACATCAAAAGAAGAGGATGAGCCACTTCCCGAAATTGAAGCAAGAATTTGCGACAAAAATGTCCTTATAAGAATACACTGTGAAAAAAAGAAAGATATCATAGAGAAAACAATAGCTGAAATTGAAAATTTGCACCTTACAATAGTCAACAGCAGTGTTATGTCATTTGGGAGTCTCGCTCTCGACATAACTATTATCGCACAGGTAATAACCACACGCCATCTACATAACCCACCAAATACTTAAATTTCTCGAAATCAAAATTCTAAGCTTAAGAATCACCTACAATCAGTTCATTTGTATCTATTTTACATTTACCCTCATACTGGTTCTTGAAACATATTCATCTTTCTGCAGATGGATAATGAATTCTGTTTAACATTAAAGGACCTAGTGAAGAATTTGCAATCGACTTTGCGCTCGTTTTAACAAGAAGATAGAAGAATGCATTAAATAAGATCAGGAGAAGGAGCAGGAGCAGGAGCAGCCCTTGTGCTACAACAAAATAAAATCAACCATAGACAAAACTTATCCCTTTCTAAAACCATTATGTTTACAGGTCTGTGATGTTTCAACAAATTTGAACCAATAACCTTTCAAGCAAACCAGTTGTGAGATTCACATTTCAGGGTGGGGGTTTTTCTTTTTCATTTTTGCATGTGAAACCATGTTCTGTTTGTCACCTACCTGTTTTTCATAGCTTGTTTGGAGGGTGTTTTTTTTTTCCATTGAAGATGTTGCTCTAAAAGCAGCAAAATCTATGGATTCTTCTTCTTGGGTGTAGATGATGAAAAGGGGAAGTTGGTTTTTTTGAGTTTGTTAGTCAGATCAGGCCTTTGTTGTTCATCTTTCTTCTATTTGTATTTGGTGTTTTAGAGGGCATTCATGGAAATGTATGAGCCTCTTTTTCAGTGAACTTTGGTTTGTAATGTCTCTTGTTTTGAAGTGATGAAATAGTTTATAAACTTTGCTTCTTTCATTTTGTTACCAAACTACAGTTCTCTCTCTCTCTTC

Coding sequence (CDS)

ATGGAGAAATCTTCTATGGTGGTTTTTTCTGAGATGGGAATGGAGGATAATGGCTTTGTCAATCAGTGGCACAAGAGCTCAATGGATGATCTTGGTTTGCACCCATTAGCAGCTGCTTTTGGGGAGAATTTGCAGCATTCTTATGATCAATCAAATATTGATCAGAAGGCTTCTTTAAACCATTCTCACAATGCCATACTTGGGTATATGAAACAGCTCAAGAGTGATGGGTGGAGTTCATACCAAACAACTAATCATTTACCGAACTCACAAGTCGTTGCTTACCCAACTGTATCTGTTTCGGCTTCTAACTACATGAACCAAATGGATTTCTCTAGGCCAAAAGAGGAGGTTGTGTGTCCTCAGAGTATTAGCAACCTCCCTTCTGATATGTTGATTTCTCAGGACTCATTAGCCCATCAAAGCCACACAACCAAGTCGAATCGTGGAACAAGAAGTCCCTCTAGAAACAGTAGAATCCCCCAGGCTCAAGATCATATTCTTGCAGAGCGGAGACGACGAGAGAAGCTCAGCCAGCGATTTATTGCTTTGTCTGCTATAGTTCCTGGCCTAAAGAAGATGGACAAGGCTTCAGTTCTTGGAGATGCCATTAAGTACCTGAAACAACTTCAAGAGAAAGTGAAGATACTAGAGGAACAAACCCGCAGGAAAGACATTGAGTCCGTGGTATTTGTCAAGAAATCCCATGTTTTCCCTGATGGAAATGACACATCAAAAGAAGAGGATGAGCCACTTCCCGAAATTGAAGCAAGAATTTGCGACAAAAATGTCCTTATAAGAATACACTGTGAAAAAAAGAAAGATATCATAGAGAAAACAATAGCTGAAATTGAAAATTTGCACCTTACAATAGTCAACAGCAGTGTTATGTCATTTGGGAGTCTCGCTCTCGACATAACTATTATCGCACAGATGGATAATGAATTCTGTTTAACATTAAAGGACCTAGTGAAGAATTTGCAATCGACTTTGCGCTCGTTTTAA

Protein sequence

MEKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSHVFPDGNDTSKEEDEPLPEIEARICDKNVLIRIHCEKKKDIIEKTIAEIENLHLTIVNSSVMSFGSLALDITIIAQMDNEFCLTLKDLVKNLQSTLRSF

Homology

[Close]

BLAST of Cucsat.G9292 vs. ExPASy Swiss-Prot
Match: Q1PF17 (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 92  HLPNSQVVAYPTVSVSASNYMN-QMDFSRPKEEVVCPQSISNLPSDMLISQDSLAHQSHT 151
           H P+S+++++    +   N+ +  + FS   EE+  P+   +  ++++I          T
Sbjct: 63  HQPSSRILSFEKTGLHVMNHNSPNLIFSPKDEEIGLPE---HKKAELII--------RGT 122

Query: 152 TKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKKV 201
            ++   TRS S       AQDHILAER+RREKL+QRF+ALSA++PGLKK+
Sbjct: 123 KRAQSLTRSQS------NAQDHILAERKRREKLTQRFVALSALIPGLKKM 155

[Close]

BLAST of Cucsat.G9292 vs. ExPASy Swiss-Prot
Match: Q9T072 (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 107 SASNYMNQMDF-SRPKEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSR 166
           S+S  ++  D+ S   E    P  ++++ S  L +Q    HQ     + +GT+     SR
Sbjct: 87  SSSRILSFEDYGSNDMEHEYSPTYLNSIFSPKLEAQVQ-PHQKSDEFNRKGTKRAQPFSR 146

Query: 167 -IPQAQDHILAERRRREKLSQRFIALSAIVPGLKKV 201
               AQDHI+AER+RREKL+QRF+ALSA+VPGLKK+
Sbjct: 147 NQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKM 181

[Close]

BLAST of Cucsat.G9292 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 54  YDQSNIDQKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMN 113
           Y+++N+    SL++S  A     +  K D    ++     P + V   P + ++    + 
Sbjct: 22  YEENNLSPDESLSNSRRA----DQSSKFDHQMHFECLREKPKAAV--KPMMKINNKQQLI 81

Query: 114 QMDFSRPKEEVVCPQSISNLPSDMLISQDSLAHQSHTTKS-NRGTRSPSRNSRIPQAQDH 173
             DFS          ++ + P+   I  D L  +    K+ + GTRSP        A++H
Sbjct: 82  SFDFS---------SNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSP------VLAKEH 141

Query: 174 ILAERRRREKLSQRFIALSAIVPGLKK 200
           +LAER+RREKLS++FIALSA++PGLKK
Sbjct: 142 VLAERKRREKLSEKFIALSALLPGLKK 147

[Close]

BLAST of Cucsat.G9292 vs. ExPASy Swiss-Prot
Match: Q8S3F1 (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.4e-04
Identity = 35/110 (31.82%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 90  TNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDMLISQDSLAHQSH 149
           TN+  NS   +  + S S S     + F  P  +    ++  N  + + + Q  +  +  
Sbjct: 58  TNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQ-KVGSKRK 117

Query: 150 TTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKK 200
              +N G R P         ++H+LAER+RR+KL++R IALSA++PGLKK
Sbjct: 118 DCVNNGGRREPH------LLKEHVLAERKRRQKLNERLIALSALLPGLKK 160

[Close]

BLAST of Cucsat.G9292 vs. NCBI nr
Match: XP_031744300.1 (transcription factor bHLH18 isoform X1 [Cucumis sativus])

HSP 1 Score: 397 bits (1021), Expect = 3.35e-137
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60
           MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID
Sbjct: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60

Query: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120
           QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP
Sbjct: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120

Query: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180
           KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR
Sbjct: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180

Query: 181 EKLSQRFIALSAIVPGLKKV 200
           EKLSQRFIALSAIVPGLKK+
Sbjct: 181 EKLSQRFIALSAIVPGLKKM 200

[Close]

BLAST of Cucsat.G9292 vs. NCBI nr
Match: XP_008455092.1 (PREDICTED: transcription factor bHLH18-like isoform X1 [Cucumis melo])

HSP 1 Score: 380 bits (977), Expect = 1.65e-130
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60
           MSFPFLGFDKFKLFAI EGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NID
Sbjct: 1   MSFPFLGFDKFKLFAIIEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNID 60

Query: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120
           QKASLNHSHNAILGY+KQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RP
Sbjct: 61  QKASLNHSHNAILGYVKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRP 120

Query: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180
           KEEVVCPQSISNLPSDMLISQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRR
Sbjct: 121 KEEVVCPQSISNLPSDMLISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRR 180

Query: 181 EKLSQRFIALSAIVPGLKKV 200
           EKLSQRFIALSAI+PGLKK+
Sbjct: 181 EKLSQRFIALSAIIPGLKKM 200

[Close]

BLAST of Cucsat.G9292 vs. NCBI nr
Match: XP_031744301.1 (transcription factor bHLH25 isoform X2 [Cucumis sativus] >XP_031744302.1 transcription factor bHLH25 isoform X2 [Cucumis sativus] >XP_031744303.1 transcription factor bHLH25 isoform X2 [Cucumis sativus] >KAE8645832.1 hypothetical protein Csa_017070 [Cucumis sativus])

HSP 1 Score: 362 bits (928), Expect = 3.81e-123
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 9   DKFKLFAITE-GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNH 68
           +K  +   +E GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNH
Sbjct: 2   EKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNH 61

Query: 69  SHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCP 128
           SHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCP
Sbjct: 62  SHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCP 121

Query: 129 QSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRF 188
           QSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRF
Sbjct: 122 QSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRF 181

Query: 189 IALSAIVPGLKKV 200
           IALSAIVPGLKK+
Sbjct: 182 IALSAIVPGLKKM 194

[Close]

BLAST of Cucsat.G9292 vs. NCBI nr
Match: XP_008455093.1 (PREDICTED: transcription factor bHLH18-like isoform X2 [Cucumis melo] >XP_016901719.1 PREDICTED: transcription factor bHLH18-like isoform X2 [Cucumis melo])

HSP 1 Score: 347 bits (890), Expect = 2.27e-117
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 9   DKFKLFAITE-GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNH 68
           +K  +   +E GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NIDQKASLNH
Sbjct: 2   EKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLNH 61

Query: 69  SHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCP 128
           SHNAILGY+KQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RPKEEVVCP
Sbjct: 62  SHNAILGYVKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVCP 121

Query: 129 QSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRF 188
           QSISNLPSDMLISQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRREKLSQRF
Sbjct: 122 QSISNLPSDMLISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRF 181

Query: 189 IALSAIVPGLKKV 200
           IALSAI+PGLKK+
Sbjct: 182 IALSAIIPGLKKM 194

[Close]

BLAST of Cucsat.G9292 vs. NCBI nr
Match: KAA0031401.1 (transcription factor bHLH18-like isoform X2 [Cucumis melo var. makuwa] >TYK06852.1 transcription factor bHLH18-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 344 bits (883), Expect = 1.70e-116
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 20  MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQL 79
           MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NIDQKASLNHSHNAILGY+KQL
Sbjct: 1   MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLNHSHNAILGYVKQL 60

Query: 80  KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDMLI 139
           KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RPKEEVVCPQSISNLPSDMLI
Sbjct: 61  KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVCPQSISNLPSDMLI 120

Query: 140 SQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKK 199
           SQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRREKLSQRFIALSAI+PGLKK
Sbjct: 121 SQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRFIALSAIIPGLKK 180

[Close]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL
Match: A0A0A0K7M3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G069180 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.62e-137
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60
           MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID
Sbjct: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60

Query: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120
           QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP
Sbjct: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120

Query: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180
           KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR
Sbjct: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180

Query: 181 EKLSQRFIALSAIVPGLKKV 200
           EKLSQRFIALSAIVPGLKK+
Sbjct: 181 EKLSQRFIALSAIVPGLKKM 200

[Close]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL
Match: A0A1S3C1B7 (transcription factor bHLH18-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495348 PE=4 SV=1)

HSP 1 Score: 380 bits (977), Expect = 8.00e-131
Identity = 190/200 (95.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MSFPFLGFDKFKLFAITEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNID 60
           MSFPFLGFDKFKLFAI EGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NID
Sbjct: 1   MSFPFLGFDKFKLFAIIEGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNID 60

Query: 61  QKASLNHSHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRP 120
           QKASLNHSHNAILGY+KQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RP
Sbjct: 61  QKASLNHSHNAILGYVKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRP 120

Query: 121 KEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRR 180
           KEEVVCPQSISNLPSDMLISQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRR
Sbjct: 121 KEEVVCPQSISNLPSDMLISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRR 180

Query: 181 EKLSQRFIALSAIVPGLKKV 200
           EKLSQRFIALSAI+PGLKK+
Sbjct: 181 EKLSQRFIALSAIIPGLKKM 200

[Close]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL
Match: A0A1S3BZP1 (transcription factor bHLH18-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495348 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 1.10e-117
Identity = 175/193 (90.67%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 9   DKFKLFAITE-GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNH 68
           +K  +   +E GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NIDQKASLNH
Sbjct: 2   EKSSMVVFSEMGMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLNH 61

Query: 69  SHNAILGYMKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCP 128
           SHNAILGY+KQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RPKEEVVCP
Sbjct: 62  SHNAILGYVKQLKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVCP 121

Query: 129 QSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRF 188
           QSISNLPSDMLISQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRREKLSQRF
Sbjct: 122 QSISNLPSDMLISQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRF 181

Query: 189 IALSAIVPGLKKV 200
           IALSAI+PGLKK+
Sbjct: 182 IALSAIIPGLKKM 194

[Close]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL
Match: A0A5D3C6C8 (Transcription factor bHLH18-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001560 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 8.22e-117
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 20  MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQL 79
           MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSY Q+NIDQKASLNHSHNAILGY+KQL
Sbjct: 1   MEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYAQTNIDQKASLNHSHNAILGYVKQL 60

Query: 80  KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDMLI 139
           KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNY NQMDF+RPKEEVVCPQSISNLPSDMLI
Sbjct: 61  KSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYTNQMDFTRPKEEVVCPQSISNLPSDMLI 120

Query: 140 SQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKK 199
           SQ SLAHQSHTTKSNRGTRSPS NSRIPQAQDHILAERRRREKLSQRFIALSAI+PGLKK
Sbjct: 121 SQGSLAHQSHTTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRFIALSAIIPGLKK 180

[Close]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL
Match: A0A6J1GK04 (transcription factor bHLH25-like OS=Cucurbita moschata OX=3662 GN=LOC111455015 PE=4 SV=1)

HSP 1 Score: 290 bits (742), Expect = 1.93e-95
Identity = 149/182 (81.87%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 19  GMEDNGFVNQWHKSSMDDLGLHPLAAAFGENLQHSYDQSNIDQKASLNHSHNAILGYMKQ 78
           GMEDNGFVNQW KSS+D+LG+ PLAAAFGE+LQHSY QSNIDQKASLN SHNAILGY+KQ
Sbjct: 13  GMEDNGFVNQWQKSSIDELGV-PLAAAFGEDLQHSYAQSNIDQKASLNRSHNAILGYVKQ 72

Query: 79  LKSDGWSSYQTTNHLPNSQVVAYPTVSVSASNYMNQMDFSRPKEEVVCPQSISNLPSDML 138
           LKSDGWSSYQT NH  NS VV+YPT SVSASNYMNQMDF+RPKEEVVCP+SISNLPSDML
Sbjct: 73  LKSDGWSSYQTNNHSSNSPVVSYPTASVSASNYMNQMDFTRPKEEVVCPRSISNLPSDML 132

Query: 139 ISQDSLAHQSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLK 198
           +SQD+L H SH      GT+S S NSRIPQAQDHILAER+RREKL+QRFIALSAIVPGLK
Sbjct: 133 VSQDTLRHPSH------GTKSTSTNSRIPQAQDHILAERKRREKLNQRFIALSAIVPGLK 187

Query: 199 KV 200
           K+
Sbjct: 193 KM 187

The following BLAST results are available for this feature:

BLAST of Cucsat.G9292 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PF17	2.1e-08	37.27	Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1	[more]
Q9T072	1.8e-07	42.71	Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2	[more]
Q1PF16	2.3e-07	31.97	Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1	[more]
Q8S3F1	2.4e-04	31.82	Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1	[more]

BLAST of Cucsat.G9292 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744300.1	3.35e-137	99.50	transcription factor bHLH18 isoform X1 [Cucumis sativus]	[more]
XP_008455092.1	1.65e-130	95.00	PREDICTED: transcription factor bHLH18-like isoform X1 [Cucumis melo]	[more]
XP_031744301.1	3.81e-123	94.82	transcription factor bHLH25 isoform X2 [Cucumis sativus] >XP_031744302.1 transcr...	[more]
XP_008455093.1	2.27e-117	90.67	PREDICTED: transcription factor bHLH18-like isoform X2 [Cucumis melo] >XP_016901...	[more]
KAA0031401.1	1.70e-116	95.03	transcription factor bHLH18-like isoform X2 [Cucumis melo var. makuwa] >TYK06852...	[more]

BLAST of Cucsat.G9292 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M3	1.62e-137	99.50	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G069180 PE=4 S...	[more]
A0A1S3C1B7	8.00e-131	95.00	transcription factor bHLH18-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A1S3BZP1	1.10e-117	90.67	transcription factor bHLH18-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A5D3C6C8	8.22e-117	95.03	Transcription factor bHLH18-like isoform X2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GK04	1.93e-95	81.87	transcription factor bHLH25-like OS=Cucurbita moschata OX=3662 GN=LOC111455015 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 153..196 e-value: 2.8E-5 score: 25.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 164..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..162
None	No IPR available	PANTHER	PTHR45959	BHLH TRANSCRIPTION FACTOR	coord: 4..194
None	No IPR available	PANTHER	PTHR45959:SF25	SYMBIOTIC AMMONIUM TRANSPORTER	coord: 4..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9292.T2	Cucsat.G9292.T2	mRNA
Cucsat.G9292.T1	Cucsat.G9292.T1	mRNA
Cucsat.G9292.T4	Cucsat.G9292.T4	mRNA
Cucsat.G9292.T3	Cucsat.G9292.T3	mRNA
Cucsat.G9292.T10	Cucsat.G9292.T10	mRNA
Cucsat.G9292.T5	Cucsat.G9292.T5	mRNA
Cucsat.G9292.T9	Cucsat.G9292.T9	mRNA
Cucsat.G9292.T11	Cucsat.G9292.T11	mRNA
Cucsat.G9292.T6	Cucsat.G9292.T6	mRNA
Cucsat.G9292.T12	Cucsat.G9292.T12	mRNA
Cucsat.G9292.T7	Cucsat.G9292.T7	mRNA
Cucsat.G9292.T8	Cucsat.G9292.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity