Cucsat.G8880 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8880
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	TLC domain-containing protein
Location	ctg1635: 1066868 .. 1074097 (-)
RNA-Seq Expression	Cucsat.G8880
Synteny	Cucsat.G8880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAACGCTAAGGAGCGCAGCGTAGCGTGAGAAAAGAAGACACTATTGCTTTGGGCCCAATTACCTGACCCTAATCCTTCCCTCTCTCTTTCTTCCATTCCTAACAGAAATTTCTTTTCCTCTTTCTATTGCCTTCTTCTCTTCTTCCCCATTTTCATTATCATTCCCATTTTCCGCCTTTCTTTCTACTTCTCTTTCTTCCTCCTTTAATCCTTCTCCGCTCTTCTTATTGCTTCCTGATTCTTCTCCGCCGCGTCTCCACGTTTTCCGCCGATTTTCCGGTGAGTTTTTATGGTTTTTGTGATCATCTTTTGTCATTTTTTGCTTATCGATTTGTTTTGGTTGATTTTCTGATCAAACGCGCATTTCTGTGGTGTTTTTACTTCTATTTCATTCTCTATATGAGTTTTTTGTGTGCTTAATTCTCGTTTTTGTTTTGTTTTGTTGATTTTTTTGGTTTATGTTCTTTTGCTTTATAACTTGATGTCGGAATTTATCCTTTGTCAAACTTACTTATTGCCGTTGATGTTTTTGGACGATCTCCTTCGTCTTTCGATTTTCGCGATGAGTGTGAATTTGCATTCTACTTGGTTATTTCTTTCGTTTTTCAGTGTGATTGACTTTTCATTGGCTGCATTAGAAATTCATGACGGATTGACTTAACTTTGTGTAACTTGCGGATTGCTGTTGGTGTATTTTGACGATCTTCTTGGAGTTCCGATTTTCTTGATTAGTGTATAAATTTGAATTCTATTAGTTTTTTTATTCTATTAAAATTTATTGACGTATGTTTTCAATGTGATTGATATCTCTATAAGAGTTTAAATTAGACTGCCATTGTGAAACGTGCTGGTCACTGGTCCTTGGAAGTTGGACGTTCTCCTTTGTATTTCAGTTTTGTGATGAGTGGAAGTGTGAATTTTACATACGGTGGGACTCTGAAGCTAATTCACAATGTTTGTGTTTGGTAGTTTTGATCTTTCAGTTCTGAGGTTGTTATGTATTATCTATCTATCGTGTAGGACTTCATTGAACTGCAAGTTTATGATGGTTTAGGAGATGCTTTGTATATTCAGCCTGTGGTCTAAAGATTTTAGAAGCTTGGTTGTACTTGTTGTACATTTAGAGCTTTTGAATAAAAAGATTGTGATGTGTTATTAGAAAATTTGCAACATGCAATGTTGTTTTTACCGTGTCACAATCATCTTATCCTAGGTTTTAAATCTACTTAGCTTGTTGCATGCATCTGGAAGTTGGATGACTAAGCATTTGACCTCATAGTTCTAACATTTAAGTATTCGGCCAATTTTTTACCAGTAAAAATTGGAAATAAATTCTACACATGTTCGTTTGCTCCAATTTTGATTGAGCTGATTAGCCAAAAGGAACTACCTAAGGATCGAGAGCCAAGGGTGATCCCTCCTAAAGAGATTGTACGACAAAAAGGTTTTCCAATCTGTAATAGTAATGGAAAGATTTTATTACGAAAGACGTCTTTGTGATTTGAACTCCACCAAGAGGCCATATGTTGTATACTATAGACAAGAAGAAGTTTCAGTATTTCACGAATGGAATGAAATTTCTGCTTTGATCCTGCCAGCACACCAGTTCATGTGTCATCATGTTTGATTCTTTGTATTCTTTCTTTGGGGGTTTTAAGCAATCTTTCTACTTGGGGAATATTTGAGCATGAATACTAATATTACTTTGTGACTATTTAATTTATCTTCTGACCTGCTTCTTGCTCATTGGCGCATTATAGATTAAGAAGAATGTCAAGTGTTAACCCTTGTTAGATAACATAAAATTGTAATGAGAGATGTGACATTAAACCAAGTAAAATGCCATGGTTTGTACAAAGTTCTTTCAGTTTTGCAATAGAAGCAAAAGGATTCCACCTAGATGAGTTTTGGATGGTAGAACCACTCCATTGTTCTCTTGTAGAAAAGAGGGAAACTACTAATTAATTACAAAAGTAGAGCTTCTTAAGGAAGCCTTAAATTTGATAAACCTATAGTACCTCTCCCGTCCTAGTTCCTTAACTGGGATTCTGAGAGCACTCTGCCACAACTCCCTTGCCATCTGTTTGGATGAAACCTTTTGATTTGTAGTTCCTTCACTTCGCTTATTAGTCTCTCTTATTGTCTTGGGTTGACCTTTATAGAGTGGTGAATGAGAATGATGCTCTTGTCTTAACTCTGCCAATTATGTTTAGTTTTCCTCATTAGTTGGTTAAGATGGCTTACCTTTTACTTTGAAAACAGGTGTGAATAGGCAGAGAAGAAGTTAGAGAATTTGAAGGAATTGCGCATCTTGTTTCTTTTGAAGCTGTGGCATGCTGTAACCCAAGATTGAAACAAGCGATCATGTCACTAAAGAGCCAGGCCGGGGAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATATATTTCCATTCCCGCAGGCGTACTTGCTAGCAAATTGGTACCTTCCTGTCATCTATGGCTCTTTTATCTTGTTGAATGTGGGTCCCTTGCATGCGACTTTATCTTCAATGCAATCATCATGATGTTAAAAGGTTGATAATATGCTTGTAGTTAGTTTCTTTTCTCTTTGTGAGTTTGCATGTGAAGTTCTTCTTCTTTGTATTTATTTCTGCATCATTTGTAATTCATCCTATGGTTTCCAGGTCTATGATCTTACTGATATGATAAGCAGTGTTTACTTCAAGAGCTATTCAAATCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGTACATGATCATCCCCTTCTTTGCATTGGTTTATTTCTTTTTTCTTTGTAATATGTTTTTGTGTTTGCTGTTTTTACAGGGCAATGTCAACTGTCCATGCCATTTTCATCACAGCAGCAGCATTATACATGGTGTTTTTATCAGATCTCTATTCTGACCAATATTTTGGCCCTATTACCTTTCGTAATTCAACAATATCTACATTTGGCCTGGGAGTAAGTGCACTCTTTGTACTAAATTCATATATATGAGTAGGTATATTATCATAGAGTGAGAAATTTTGTCTTATGCTGGAAATGTTAAGGGCCTCCCTCAACTTTGTGAAGCTTATAGACTATAGTATGGTAACAATAAAGATGGAAGATTTGTCTAGTCAAAATAAAATTAAAAAAAAAAGATGGAGATTTTTGTTTCAGAGGATGGTTCTTGAAAGAATATGCCCTGATCAGGTCCTAAGAATTAGGATCGAAACCTGAAAGGAAATGTATACCTTTGAGATTTAAGACTCATAAAACTTTTTTTGGGTGGAGCAAATGATATAGATCATTGGTACTTCCCTATCAAGTTTTTGGTCATAATAATTGTTTATATTATTAAATTTGACATCACCTATTAGCTTAAGCTTTTTGGATGAATTTGTGATTTAAGATGGTATCAGAGCAAGTGGTCCAAGAAGGTCTTGTGTTCAAACTCTTGCAACGTTATTTCCTCCCCATTTAATATGGATTCCCACTTGTTGGGTTTTTATTGATATCTTAAGCCCATATGTGAGGGGGAGTGTTAGATATTATATTAAATTTGTCATCACCTATCAACTTAAGTTTTTGGGATGAATTGGTGATTTAAGAAACTTAAGTTTCTCACTGAGAGGATAACAGTGGCATTAAGCTTTATTTATGAGGAAGTATTGCATGGAAAGTTGGAAGGGGGGACAGAGAGCAGTGTGAATTTGGCATTTTGATAATTAGAACTCTCGACTGAAATAATATATAGGCTGAAAATGTGTTATCGAACAATCTAAAAATCTATGTTGATTATTGAAAATTGTATCCAAAGAAACATGACACGTTGTTAACCACCATGACTTGTCATAGTGGTCAACAGATGTTTGTGTAAATAATAAAGGATTAAAAGAGAATAAATTCGAGTCATGTGCCCACCTTTCTAGGATTTGATATTCTAGAAGCTACCCTAGATGAAACATAGTTCAAAGTGTTGCTGTGTTCTAGAGAATGATAGAAGCTTAGAAGTAAGAGCACCTGAAAAATAATGCTTTGAAACCAATTTCATCATGGGGTAATTTAAATATAACCTTTATTTCTGCATTAAAGTTTTCTTGTGCTACTTGATAGTTGATCTCAAATGTTATGTGTAGGGTGGATAACATGTGGGCTTTTTTGGAGATGTTACGTTAGGAGAACATTATTCAATTCTTCAAACAGCTGTTCTTATTACTTTGAAAATTTAGTTGTTTTATTATATTCGGAAGAGGATTTCAAGTAGTGCGTTAAAAGGGTCTAGTAAAAACCTTTGGATGACCCTAGTCTTGGGTTGTCCTTTGTTTTACAGTTTGTTAAATGTTACATGGGATTGGTCTAATATATACTTTTGTTAAGGATTTTTGGCTGTGTTAAGCCCGCTATGATTTTCCCCTTCCTTTTATCATCCGCCTGAAATGAGGTTTCACTTGGTCACTTCTATTCTACGTCCCTCAGAGTCTCCACCTTTTTTATTTTGGGTTTTCGTCATCCTCTCATTGATAGTGAGTTTTTGGAGGTTGTGGTTCTTCTTCCTATTGTTTCCGATAAGAGGTTTGTTGTTGGGATAAGAGATGTTTGGGTATGGATGGCTCCCAAGTCTATCTGAGGAATTTTTGTGTCGTTCCTTTTTCTTTTCCCTCAGTTCTCTTCCCATTTAGGGCTTAAGTTTTTTTTCTTCTCTTTGGAAGGTAAGAGTTCCTAAGAAAGTGGAGTTTTTTGCTTGAGAAGTACTACTCACTAGAGTGAGTGGTGAACACCGATTCTTTTCTTCTGTCTTGTCGTGTCCTTATCTTAGGTTTCGTTTGGAGGAGGATCTTGACCATCTTTTGTGGGGTTGTGAGTTTGCTTTTTCTCTTTGGAGTTGTCTTTTTTAGGTATTTGGTGTCGACTTTTGTTACATAATGGAGGAGATTTTTAATGAAAATTTCCTTTCGTGACAAGGGAATAGTCTTGTACCAAGCTTGTTTTTGTGTTATTTTGTGGTGAGTAGCTCAAGAGGAAGCTTTTAACTTTTCAAACTTTTCAAACAAGTGTGGGAAGCAGTGAGGTGTTTAATGCGTTTTTTTTTGGGTGTTTGTTAATCGGACTTTTTTGTAATTTTTGGTTGGCGTTATTCTTTTGGATTGGAGTCCGTTCCTGTAGTATTTTAGGACTCCTTTTTCTGTTCTAGTTTTCTATCTGTGTTAGACTTAAAATTTTGTCAGTCTAAACATAGTTTAGTGGTTAAAGCATCTAATCTACTGCTATCATAAAATCATTTCTTCAACCATTTCCCCAGTAATTATTAAACTCGGGATAGACTTAAGTTTTGATGACGCTACTGCAGGTGTCTGTCGGTTACTTCATAACCGATCTCGTGATGATCCTTTGGTTTTACCCTGCAATTGGTGGAATGGAGTATGTAAGTGCATTCTACTTTTTAAATATTACAAGCTATTTGTATGTTCCCGTCATCTTATCTTGTGTTCTTCAGGGAAAAAAAAACGTAGAAAATTCGTTGTTGACAACGTGAACGTGGTGTTTTTATTTTTTCAGGTGATACACCATCTTCTTTCTCTCTTAGCTGTGGCCTATGCCATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTAATTTTCCCTTAAAAAGTTTATGTTAAAATCCCATTTTAGTCCTTGTATTTCCAAGTTTCTTCAATTTTAGTCCTTGTCTTTTTAATGAAAACTTAAATTTATTCGATATTGTTAAACTTTTTTGAAATGTTTTTATTATCTATTAGCATTTCTGAATAAATTTTGACAACTTATTCACATTTTATAGTTTCTTGCATGAAAACTACTGTCATCAATTAGCCAATTCTGATAAAAAATAAGTTTGAGGAACTAAAATTGTACCAAATTTAAATTACTGGAGGGGAGAAAATGATATTTTAAGGAAAATTATAATTATGAAGTGAAATAGTGTGTTGATTTTGACTTGGAATTTGTTCATACATCCTCAGAATATAGTTTATTTTCTAAAATAAATTTTTGTGCGTAGGTACCTTGATACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAATTGTTATATTCTTCGCGTGGCTGGTGAGTAACAAAAATTAATCTTATTATTTATATATGTATTTTTTTTATATATATTTATTTTGGGTATTTTCAAAATATAGCAAAATATAACAAAATAATGGATAGATTGTGATATTTTGTTAGTTTTATAGACACTTTTGGAAGTTTTTGTCATATAAAATAAAATTTCATTTATTTTTCTATATCTAATAATTTCTATAATATGTATTTTTGTAAGCAGTTTGGACTAATATGAATATATATATATATATATATTTTGTTGTTCAGGTTGCGAGAATTCTGTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTATAATCAATCTCTAAGCTATTTGTTGAAGTTATTGGATTTACTACTCTTACTGTTTTTGCTCATTTATTGGCAAAAATGCATTTTCAATCTTTTACTTCCTTTATTATCATTTCTATCCATCACATCTACTCTTAAGTTTTTTTTCTTGTTACCTTTCCATTGCCACTTTACCTTTTTTTTCTTTAATATCCATGTTTACATCCACCTTTTTTTTTTTAAAAAATATCCATGTTTACATCTACCCGACTAATCTCATGGAATAATCTACTTGATTCTTCCTGCAACATATTGTGATGATTAGTAGTGTGTTATTATATATATGTACTTCACTTTCAATAAAATTTGATAAGGATTTATGTCTTGATTTGCTTGAATTAAAAAAAAAAAAAAAACAATGCATTTTTATTTTATTTTTTTTGTGTGGCCATTAACAGGTTTTGCAGATGCACGTTTTTGGGCAATTTTTGGTGTTCGTGGTTCCATCGATATTATGGATCATGAACTTGACGTGGTTCTCTAAAATATTTAGAGGATTGAAAAAGACATTGGCAAAGAGGCAATGAAAACCCAAATAGTCTATACATACTATTTGGAGCCAACCAGCATTGTGATGAGTGACATAAAAGGGAAGGTAGTTCAAATTATTAAAAGCTTCTCTTCTCTGCTTCCCCTCCCACCTCCCCACCTTCCACCTCCCCCCTCCCCCCTCCCCCCTCCCCCCACTTTGTACATCTCCAACTTTCATAATTTGTACAATTTCATGTTAAAATTAAGTACATAGATAGCCATTTCTACTAGGAAAAAAAGAAAAGAAAAAAAAAGAAAAGAGAAGAATTAGCATAATTTTAATGTCATTATGATTGTTTATTGTAGATTATAGGAAAAGGATTTCTTCTTCTTCTTTTTCTTTTTTCACTCCTTAATTTCATGCCTTGCTTTTGTTGATAATATTTTAATGTTCGTATTTAATTTATTTGTTCCATGAACCTCAAAATGTTTAATAAGTCATACTTATATTGTGTATGTTTTTAGCAAGTTTTTAAACTTTTAAACAATCTAAAAGCCCCTCTTGTAGTTCATTGAAACCTTAATTAAATTTGTAGTTGAATGAGAATATATGTTAACCTGACATTAGATGTATATTTCTTTTTAATGAACAAACAAACAAAACTTTTGACATGTAATCTAACATAAAATATGGGTAAAGCTATGAATATAATGGAAGAGTTTACGGTTTCTCATATGGTTAGGTCCAAATTGATATGATGGTGAGGATGGGGGAAATCTTTCAGCTTTACAAACTTAAAATTGAGTTGGGAAATGGAGGACAGAGAATTGGAATTGGAATTGGAAGAGGAGGTGTTGTTATCTTGATTATCACTTAACTGTCTCTCTACAATTTGCTGTGTCATTGAGGGTTTGAGGGACAATGTGAGTTCACAATCACATGTTTGGTCCTCTAACATCGACTCCCCGACGCATTCCTCCTCCGACTCTGACTCTGATTCTGAAGCCTACAAATGTTTCAAT

Coding sequence (CDS)

ATGTCACTAAAGAGCCAGGCCGGGGAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATATATTTCCATTCCCGCAGGCGTACTTGCTAGCAAATTGGTCTATGATCTTACTGATATGATAAGCAGTGTTTACTTCAAGAGCTATTCAAATCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGGCAATGTCAACTGTCCATGCCATTTTCATCACAGCAGCAGCATTATACATGGTGTTTTTATCAGATCTCTATTCTGACCAATATTTTGGCCCTATTACCTTTCGTAATTCAACAATATCTACATTTGGCCTGGGAGTGTCTGTCGGTTACTTCATAACCGATCTCGTGATGATCCTTTGGTTTTACCCTGCAATTGGTGGAATGGAGTATGTGATACACCATCTTCTTTCTCTCTTAGCTGTGGCCTATGCCATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTACCTTGATACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAATTGTTATATTCTTCGCGTGGCTGGTTGCGAGAATTCTGTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTTTTGCAGATGCACGTTTTTGGGCAATTTTTGGTGTTCGTGGTTCCATCGATATTATGGATCATGAACTTGACGTGGTTCTCTAAAATATTTAGAGGATTGAAAAAGACATTGGCAAAGAGGCAATGA

Protein sequence

MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSILWIMNLTWFSKIFRGLKKTLAKRQ

Homology

[Close]

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot
Match: Q8CGF5 (TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.3e-17
Identity = 70/240 (29.17%), Postives = 124/240 (51.67%), Query Frame = 0


Query: 30  VLASKLVYDLTDMISSVYFKS-----YSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVF 89
           V +S +V+ +     S +F +     Y++LS  +++EWN+R +ST H++ +    LY+ F
Sbjct: 25  VCSSFVVFQILFHFVSYWFSARVSSGYNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFF 84

Query: 90  LSD-LYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSL 149
             +   +D  +G  T+ N  I+T     + GY I+DL++IL+ +  IG   ++IHH   L
Sbjct: 85  FDEATITDPLWGDPTYVNINIAT-----ASGYLISDLLIILFNWKVIGDKFFIIHHCAGL 144

Query: 150 LAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKK-SKAYLINGIVIFFAWLV 209
            A  + + TG         L++E ++P +N RW+ +     K SKA +INGI++   + +
Sbjct: 145 TAYYFVLTTGALAYIANFRLLAELSSPFVNQRWFFEALKYPKFSKANVINGILMTVVFFI 204

Query: 210 ARILLF--MYMFYHVYLHLNQVLQMHVFGQFLVFVVPSILWIMNLTWFSKIFRGLKKTLA 261
            RI+    MY F +        ++     Q +  V   IL +MN+ W  KI +G  K ++
Sbjct: 205 VRIISIPPMYFFLYSVYGTEPYIRFGFVIQSVWIVTCVILDVMNIMWMIKITKGCIKVIS 259

[Close]

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.4e-16
Identity = 68/249 (27.31%), Postives = 127/249 (51.00%), Query Frame = 0


Query: 19  PVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAA 78
           P+  +IS+ +  +   L +  +  +S+     +  LS  Q++EWN+R +S+ HA+ +   
Sbjct: 6   PLTVFISVTSLAVFQFLFHVGSSWLSTRLTGGFHKLSARQKIEWNSRTVSSFHALVVGCF 65

Query: 79  ALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIH 138
            LY++    +Y D       + +  +    + V+ GY I+DL++I++++  IG   +V H
Sbjct: 66  CLYIL----VYDDAVNADPVWGDPFMVKLNVAVTSGYLISDLLLIIYYWKEIGDKYFVTH 125

Query: 139 HLLSLLAVAYAMLTGEGQL--YTYMVLISETTTPGINLRWYLDTAGMKK-SKAYLINGIV 198
           HL +L A  Y +  GEG L  +    LI+E +TP +N RW+ +  G  K S   ++NG++
Sbjct: 126 HLAALYACYYVL--GEGMLPYFGNFRLIAEFSTPFVNQRWFFEVLGYSKYSLPNMVNGVL 185

Query: 199 IFFAWLVARILLFMYMFYHVYLHL-NQVLQMHVFGQFLVFVVPSI-LWIMNLTWFSKIFR 258
           +  ++ + RI +    +  V+     +       G    +++ S+ L IMN+ W  KI +
Sbjct: 186 MTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGLGAQCAWIISSVSLDIMNVMWMIKIAK 245

Query: 259 GLKKTLAKR 263
           G  K L  R
Sbjct: 246 GCYKVLYHR 248

[Close]

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot
Match: Q96MV1 (TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.5e-13
Identity = 65/232 (28.02%), Postives = 118/232 (50.86%), Query Frame = 0


Query: 35  LVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSD--LYSDQ 94
           L Y ++   S+     +++LS  +++EWN+R +ST H++ +    LY +FL D    +D 
Sbjct: 22  LFYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLY-IFLFDEATKADP 81

Query: 95  YFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLT 154
            +G       +++   + ++ GY I+DL +I+ ++  IG   +++HH  SL A    +  
Sbjct: 82  LWG-----GPSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKN 141

Query: 155 GEGQLYTYMVLISETTTPGINLRWYLDTAGMKK-SKAYLINGI---VIFFAWLVARILLF 214
           G         L++E ++P +N RW+ +     K SKA +INGI   V+FF   +A +L  
Sbjct: 142 GVLAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPH 201

Query: 215 MYMFYHVYLHLNQVLQMHVFGQFLVFVVPSILWIMNLTWFSKIFRGLKKTLA 261
               Y VY      +++ V  Q    +   +L +MN+ W  KI +G  K ++
Sbjct: 202 YGFMYSVY-GTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCIKVIS 246

[Close]

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot
Match: Q6GLX2 (TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12
Identity = 61/249 (24.50%), Postives = 120/249 (48.19%), Query Frame = 0


Query: 16  LSDPVVPYISIPAGVLASKLVYD-LTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIF 75
           + D ++ Y  +    L  +L++  ++  + + Y  +Y  LS  ++ EW++R +ST HA+ 
Sbjct: 1   MDDVLISYCVVTGSFLGFQLLFSAISPRLFTKYSSTYRQLSFGKQCEWDSRFVSTNHALI 60

Query: 76  ITAAALYMVFLSD-LYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGM 135
           + +A LY++   D + +D  +G   +    ++     ++ GY + DL+++  F+  +   
Sbjct: 61  VGSACLYILAYDDAVNADPIWGDPFWVKMNVA-----ITCGYLVQDLLLLARFWKVMRDP 120

Query: 136 EYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDTAGMKKSK-AYLIN 195
             V HHL    +  Y +  G    +    LISE +TP +N RW+ D  G  +S    L+N
Sbjct: 121 YMVCHHLAVFYSYGYVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLN 180

Query: 196 GIVIFFAWLVARILLFMYMFYHVYLHLNQ--VLQMHVFGQFLVFVVPSILWIMNLTWFSK 255
           G+ +   + + RI +    +  V+        +++ +  Q    V   +L I+N+ W  K
Sbjct: 181 GLAMALVFFIVRIAVIPSYYSQVFATFGTEGYIRLGIGPQVAWIVSCVVLDILNVFWMYK 240

Query: 256 IFRGLKKTL 260
           I RG  K +
Sbjct: 241 IARGFYKVV 244

[Close]

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot
Match: Q5XIY2 (TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.3e-11
Identity = 56/226 (24.78%), Postives = 114/226 (50.44%), Query Frame = 0


Query: 39  LTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPIT 98
           ++ ++SS + + Y  L   +  +WN+R +STVHA+ +    LY+++  D  ++    P+ 
Sbjct: 23  VSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILWYDDAVNED---PV- 82

Query: 99  FRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLY 158
           + +  +    + ++ GY   DL+++   +  +G + +V HHL +L A  Y +  G    +
Sbjct: 83  WGDPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRGVLPYF 142

Query: 159 TYMVLISETTTPGINLRWYLDTAGMKKSKAYLI-NGIVIFFAWLVARILL----FMYMFY 218
               LISE +TP +N RW+ +     ++   ++ NGI +   + + RI +    +  +F 
Sbjct: 143 ANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFLVRIAVMPPYWAKVFG 202

Query: 219 HVYLHLNQVLQMHVFGQFLVFVVPSILWIMNLTWFSKIFRGLKKTL 260
            +Y    + L + +   +++  V   L I+N+ W  KI RG  K +
Sbjct: 203 IIYSPTFEKLGLAIQVAWIISCV--CLDILNIIWMYKIARGCYKVI 242

[Close]

BLAST of Cucsat.G8880 vs. NCBI nr
Match: XP_011653984.1 (TLC domain-containing protein 4 [Cucumis sativus] >KGN55433.2 hypothetical protein Csa_012466 [Cucumis sativus])

HSP 1 Score: 504 bits (1298), Expect = 1.12e-179
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60
           MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240
           AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240

Query: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263
           WIMNLTWFSKIFRGLKKTLAKRQ
Sbjct: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263

[Close]

BLAST of Cucsat.G8880 vs. NCBI nr
Match: XP_008466799.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTED: transmembrane protein 56-like [Cucumis melo])

HSP 1 Score: 483 bits (1242), Expect = 3.86e-171
Identity = 253/263 (96.20%), Postives = 258/263 (98.10%), Query Frame = 0


Query: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60
           MSLKSQA +LLKYLVLSDPVVPYISIPAGVLASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSD+YFGPITFR+STISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240
           AGMKKSKAYLINGIVIFFAWLVARILLFMY+FYHVYLHLNQVLQMHVFGQ LVFVVP IL
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYLFYHVYLHLNQVLQMHVFGQLLVFVVPLIL 240

Query: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263
            IMNLTWFSKIFRGLKKTLAKRQ
Sbjct: 241 SIMNLTWFSKIFRGLKKTLAKRQ 263

[Close]

BLAST of Cucsat.G8880 vs. NCBI nr
Match: XP_038899443.1 (LOW QUALITY PROTEIN: TLC domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 469 bits (1208), Expect = 5.86e-166
Identity = 243/263 (92.40%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60
           MSLKSQA +LLKYLVLSDP VPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPAVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120
           EWNNRAMSTVHA+FITAAALYMVFLSDLYSD+YF  +TFR+STISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAVFITAAALYMVFLSDLYSDRYFPLVTFRSSTISTFGLGVSVGYFITDL 120

Query: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
            MILWFYPAIGGMEYVIHHLLSL+AVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 GMILWFYPAIGGMEYVIHHLLSLVAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240
           AGMKKSKAYLING+VIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP IL
Sbjct: 181 AGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPLIL 240

Query: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263
            +MNLTWF+KIF+GLKKTLAKRQ
Sbjct: 241 SVMNLTWFAKIFKGLKKTLAKRQ 263

[Close]

BLAST of Cucsat.G8880 vs. NCBI nr
Match: XP_022940088.1 (transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940090.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940091.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940092.1 transmembrane protein 56-like [Cucurbita moschata] >XP_023525630.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525631.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525633.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525634.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525635.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451 bits (1160), Expect = 1.35e-158
Identity = 236/266 (88.72%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 60
           MSLKS   QA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRI
Sbjct: 1   MSLKSYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRI 60

Query: 61  QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 120
           QR+EWNNRAMST+HAIFITAA+LYMVFLSDLYSD+YFG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRMEWNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFI 120

Query: 121 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180
           TDL MI WFYP++GGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWY
Sbjct: 121 TDLGMISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWY 180

Query: 181 LDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP 240
           LDTAGMKKSKAYLING+VIFFAWLVARILLFMYMFYHVYLHLNQVLQMH FGQ LVFVVP
Sbjct: 181 LDTAGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVP 240

Query: 241 SILWIMNLTWFSKIFRGLKKTLAKRQ 263
            +L +MNL WF+KIFRGLKKTLAKRQ
Sbjct: 241 LVLSVMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of Cucsat.G8880 vs. NCBI nr
Match: XP_022982442.1 (transmembrane protein 56-like [Cucurbita maxima] >XP_022982443.1 transmembrane protein 56-like [Cucurbita maxima] >XP_022982444.1 transmembrane protein 56-like [Cucurbita maxima] >XP_022982447.1 transmembrane protein 56-like [Cucurbita maxima] >XP_022982448.1 transmembrane protein 56-like [Cucurbita maxima])

HSP 1 Score: 449 bits (1156), Expect = 5.48e-158
Identity = 235/266 (88.35%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 60
           MSLKS   QA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRI
Sbjct: 1   MSLKSYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRI 60

Query: 61  QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 120
           QR+EWNNRAMST+HAIFITAA+LY+VFLSDLYSD+YFG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRMEWNNRAMSTLHAIFITAASLYVVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFI 120

Query: 121 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180
           TDL MI WFYP++GGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWY
Sbjct: 121 TDLGMISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWY 180

Query: 181 LDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP 240
           LDTAGMKKSKAYLING+VIFFAWLVARILLFMYMFYHVYLHLNQVLQMH FGQ LVFVVP
Sbjct: 181 LDTAGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVP 240

Query: 241 SILWIMNLTWFSKIFRGLKKTLAKRQ 263
            +L +MNL WF+KIFRGLKKTLAKRQ
Sbjct: 241 LVLSVMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL
Match: A0A1S3CS93 (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 1.87e-171
Identity = 253/263 (96.20%), Postives = 258/263 (98.10%), Query Frame = 0


Query: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60
           MSLKSQA +LLKYLVLSDPVVPYISIPAGVLASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSD+YFGPITFR+STISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240
           AGMKKSKAYLINGIVIFFAWLVARILLFMY+FYHVYLHLNQVLQMHVFGQ LVFVVP IL
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYLFYHVYLHLNQVLQMHVFGQLLVFVVPLIL 240

Query: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263
            IMNLTWFSKIFRGLKKTLAKRQ
Sbjct: 241 SIMNLTWFSKIFRGLKKTLAKRQ 263

[Close]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL
Match: A0A0A0L1M1 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 2.08e-161
Identity = 243/263 (92.40%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60
           MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWYLDT 180

Query: 181 AGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVPSIL 240
           AGMKKSKAYLINGIVIFFAWLV                    LQMHVFGQFLVFVVPSIL
Sbjct: 181 AGMKKSKAYLINGIVIFFAWLV--------------------LQMHVFGQFLVFVVPSIL 240

Query: 241 WIMNLTWFSKIFRGLKKTLAKRQ 263
           WIMNLTWFSKIFRGLKKTLAKRQ
Sbjct: 241 WIMNLTWFSKIFRGLKKTLAKRQ 243

[Close]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL
Match: A0A6J1FJ18 (transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111445812 PE=4 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 6.52e-159
Identity = 236/266 (88.72%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 60
           MSLKS   QA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRI
Sbjct: 1   MSLKSYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRI 60

Query: 61  QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 120
           QR+EWNNRAMST+HAIFITAA+LYMVFLSDLYSD+YFG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRMEWNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFI 120

Query: 121 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180
           TDL MI WFYP++GGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWY
Sbjct: 121 TDLGMISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWY 180

Query: 181 LDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP 240
           LDTAGMKKSKAYLING+VIFFAWLVARILLFMYMFYHVYLHLNQVLQMH FGQ LVFVVP
Sbjct: 181 LDTAGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVP 240

Query: 241 SILWIMNLTWFSKIFRGLKKTLAKRQ 263
            +L +MNL WF+KIFRGLKKTLAKRQ
Sbjct: 241 LVLSVMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL
Match: A0A6J1J4U4 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111481269 PE=4 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 2.65e-158
Identity = 235/266 (88.35%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 60
           MSLKS   QA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRI
Sbjct: 1   MSLKSYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRI 60

Query: 61  QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 120
           QR+EWNNRAMST+HAIFITAA+LY+VFLSDLYSD+YFG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRMEWNNRAMSTLHAIFITAASLYVVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFI 120

Query: 121 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180
           TDL MI WFYP++GGMEYVIHHLLSL+AVAYAMLTGEGQLYT+MVLISETTTPGINLRWY
Sbjct: 121 TDLGMISWFYPSLGGMEYVIHHLLSLVAVAYAMLTGEGQLYTFMVLISETTTPGINLRWY 180

Query: 181 LDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP 240
           LDTAGMKKSKAYLING+VIFFAWLVARILLFMYMFYHVYLHLNQVLQMH FGQ LVFVVP
Sbjct: 181 LDTAGMKKSKAYLINGVVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHAFGQLLVFVVP 240

Query: 241 SILWIMNLTWFSKIFRGLKKTLAKRQ 263
            +L +MNL WF+KIFRGLKKTLAKRQ
Sbjct: 241 LVLSVMNLMWFAKIFRGLKKTLAKRQ 266

[Close]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL
Match: A0A6J1CIF9 (transmembrane protein 56-like OS=Momordica charantia OX=3673 GN=LOC111011776 PE=4 SV=1)

HSP 1 Score: 449 bits (1155), Expect = 3.77e-158
Identity = 233/266 (87.59%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 60
           MSLKS   QA +LLKYLVLSDP+VPYISIPAG+LASKLV+DLTD IS+VYFKSYSNLSRI
Sbjct: 1   MSLKSYQNQAEQLLKYLVLSDPIVPYISIPAGILASKLVHDLTDSISAVYFKSYSNLSRI 60

Query: 61  QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 120
           QRVEWNNRAMST+HAIFITAAALY+VFLSDLYSDQ+FG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRVEWNNRAMSTLHAIFITAAALYLVFLSDLYSDQHFGLITFRSSTISTFALGVSVGYFI 120

Query: 121 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180
           TDLVMI WFYPA+GGMEYVIHHLLSL+AVAYAMLTGEGQLYTYMVLISETTTPGINLRWY
Sbjct: 121 TDLVMIFWFYPALGGMEYVIHHLLSLIAVAYAMLTGEGQLYTYMVLISETTTPGINLRWY 180

Query: 181 LDTAGMKKSKAYLINGIVIFFAWLVARILLFMYMFYHVYLHLNQVLQMHVFGQFLVFVVP 240
           LDTAGMKKSKAYLING+VIFFAWLVARILLF+Y+FYHVYLHL+QVL+MH FGQFLVFVVP
Sbjct: 181 LDTAGMKKSKAYLINGVVIFFAWLVARILLFVYLFYHVYLHLDQVLKMHAFGQFLVFVVP 240

Query: 241 SILWIMNLTWFSKIFRGLKKTLAKRQ 263
            +L +MNL WF+KI +GLKKTLAKRQ
Sbjct: 241 LVLSVMNLMWFAKIVKGLKKTLAKRQ 266

The following BLAST results are available for this feature:

BLAST of Cucsat.G8880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8CGF5	2.3e-17	29.17	TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1	[more]
Q6PGS5	4.4e-16	27.31	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q96MV1	3.5e-13	28.02	TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1	[more]
Q6GLX2	1.3e-12	24.50	TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1	[more]
Q5XIY2	4.3e-11	24.78	TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1	[more]

BLAST of Cucsat.G8880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653984.1	1.12e-179	100.00	TLC domain-containing protein 4 [Cucumis sativus] >KGN55433.2 hypothetical prote...	[more]
XP_008466799.1	3.86e-171	96.20	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTE...	[more]
XP_038899443.1	5.86e-166	92.40	LOW QUALITY PROTEIN: TLC domain-containing protein 4-like [Benincasa hispida]	[more]
XP_022940088.1	1.35e-158	88.72	transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane...	[more]
XP_022982442.1	5.48e-158	88.35	transmembrane protein 56-like [Cucurbita maxima] >XP_022982443.1 transmembrane p...	[more]

BLAST of Cucsat.G8880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS93	1.87e-171	96.20	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1	[more]
A0A0A0L1M1	2.08e-161	92.40	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV...	[more]
A0A6J1FJ18	6.52e-159	88.72	transmembrane protein 56-like OS=Cucurbita moschata OX=3662 GN=LOC111445812 PE=4...	[more]
A0A6J1J4U4	2.65e-158	88.35	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111481269 PE=4 S...	[more]
A0A6J1CIF9	3.77e-158	87.59	transmembrane protein 56-like OS=Momordica charantia OX=3673 GN=LOC111011776 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 1..194 e-value: 1.7E-27 score: 107.4
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 2..187 e-value: 1.2E-27 score: 96.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 1..194 score: 32.826069
None	No IPR available	PANTHER	PTHR13439:SF60	TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN PROTEIN	coord: 1..197
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8880.T3	Cucsat.G8880.T3	mRNA
Cucsat.G8880.T1	Cucsat.G8880.T1	mRNA
Cucsat.G8880.T2	Cucsat.G8880.T2	mRNA
Cucsat.G8880.T5	Cucsat.G8880.T5	mRNA
Cucsat.G8880.T4	Cucsat.G8880.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055088	lipid homeostasis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane