Cucsat.G8728 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8728
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	PSI subunit V
Location	ctg1558: 1632681 .. 1634654 (+)
RNA-Seq Expression	Cucsat.G8728
Synteny	Cucsat.G8728

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATTAAAAGAATCCACTTTAGAATTTACGAACCAACCCCAGTCCATTTACCAAATAGGGGGAGAGGGCCAAATCTAAATCTTTTCAAGTTCCAAATCCATATGGTTCATCTTAAGAGAGAAGAGATCCAAATCCAAATCTTTGAAGCTCACATGGGCTATAGCCCATTCTCATGAGATAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCCAAATCCAAATCTCTGATTTTCTCATGAGAGAGAAAGGAATGGATAAGGGATAAGGTTACGTGGCAAGTTCTATCCAATGAGAAGAGAAAGGTTTGATCAACCACAGCCTCCCACAAATTTCCATGGCCAGTGACAACCAACAACAAGAACTTAAACTAACCCCCAAAACCAAATCTAAAAATCTCACCTCAATCTTCTTCTCTGCCACTGATCCTTCCACAAGCCAAAGGCAGCAGAAGCAAAAGCAGCAGCCATGGCCACTGCAACCTCTCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCATCCAACACGAGAGCTTTGATCTCTCCTAAAGGCCTCTCCGCTTCGCCCCTCCGACGCATCCCTACAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAATATAAGCAATACCATTTCTCAATTTTACATCATCTCCCTCTCTGTGGAGCTTTTAAGATATATATATTATATACCGTGTAATGTAATACTATTTCAAGGGATATTAACTTCAATCTCAACGAATCAGAGTAATATAAACGTATTAGTTGTATAGAAATTTAAAGAGTATATTTGAGAGTGCTTTTAATGTAAGTGTGTGTGGGACTTAAGAGGAGAGTTAACCAGAAAAAATCTTTAAAATTTTATGTAAGGATATTAAGATGAAGAGAGTGAACATAAGTATAGCTCAAGGATAATTAGCATGTACACCTTCCATTATGGAGGATACCCAAATTGAAGAAGCCTGTAACGATTCGGTAGAGAAAAGATCCGTTAGTGAGAGAAAAATTGATGCAGAAAATGTATGTGAAGAGATTAATTAGATAAAAAAATAAAATGCAAATTGAATAAAAAAAAACATGCCATGCAAAGATGTTAATGAGGTATTGAAACTGTTGCAGCCGACTTTCCAAGTGATTCAGCCGATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTATCTTTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATAGAAGTGGGCCTGGCTCACGGTTTCTTTCTGGTTGGTCCATTTGTCAAAGCTGGCCCTCTAAGGAACACAGCCTACGCCGGAGGAGCAGGCTCGCTGGCTGCTGGGGGTCTCATTGTCATTTTGAGCGTCTGCTTGACAATGTATGGTGTTGCATCATTCAATGAAGGAGAGCCATCTACCGCACCATCATTGACTTTGACTGGCCGGAAGAAGACCCCTGATCCTCTCCAAACAGCCGATGGGTGGGCAAAATTCTCAGGCGGGTTTTTCTTCGGTGGTATCTCCGGTGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTCCCTTACTACGTCAAGTAGATTTTGTATCATTTTCTGTTTCTACAATGCAACTTCCATGTCTGTATTATGGAAACATAAAATTGTATATTTTCTGCCAAACCTCTTTGTTAGATCCTTTGTGATTGCATATCGATTTCCTTTTTGGAACTGTTATGTATGTACTCTACTTCCATTTGCTTCTTCACAAACAATAGCTTCTGTGCCACTGCATTAAAAACTGGTAGGAGGAGAATATCAACAATACGATGGTACTTTTTTCTTTTCTGTCATAAGAGAAATAACATATAGAAGTTATCCAGAAAAAAAAGATATCAAAATCAATGACGATTAATGTTTCTAATCATAGAAAAACA

Coding sequence (CDS)

ATGGCCACTGCAACCTCTCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCATCCAACACGAGAGCTTTGATCTCTCCTAAAGGCCTCTCCGCTTCGCCCCTCCGACGCATCCCTACAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCGACTTTCCAAGTGATTCAGCCGATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTATCTTTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATAGAAGTGGGCCTGGCTCACGGTTTCTTTCTGGTTGGTCCATTTGTCAAAGCTGGCCCTCTAAGGAACACAGCCTACGCCGGAGGAGCAGGCTCGCTGGCTGCTGGGGGTCTCATTGTCATTTTGAGCGTCTGCTTGACAATGTATGGTGTTGCATCATTCAATGAAGGAGAGCCATCTACCGCACCATCATTGACTTTGACTGGCCGGAAGAAGACCCCTGATCCTCTCCAAACAGCCGATGGGTGGGCAAAATTCTCAGGCGGGTTTTTCTTCGGTGGTATCTCCGGTGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTCCCTTACTACGTCAAGTAG

Protein sequence

MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK

Homology

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BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 4.8e-117
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 340.5 bits (872), Expect = 1.4e-92
Identity = 172/219 (78.54%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    PT R  SFT+RA+++DK TFQ
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDP 180
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PD 
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

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BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.9e-90
Identity = 168/219 (76.71%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPT--RTHSFTIRAIQADKPTFQ 60
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPT+Q
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDP 180
           KAGPLRNT YAG AGSLAA GL+VILS+CLTMYG+ASF EGEPS AP+LTLTGRKK PD 
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPYY K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

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BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.7e-79
Identity = 153/218 (70.18%), Postives = 176/218 (80.73%), Query Frame = 0


Query: 1   MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 60
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPT+QV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPL 180
            GPLRNT   G AG+L A GL+ ILSVCLTMYGVASFNEGEPSTAP LTLTGRKK  D L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPY+ K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

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BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot
Match: P51222 (Photosystem I reaction center subunit XI OS=Porphyra purpurea OX=2787 GN=psaL PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34
Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 58  QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 117
           + I+P N DPF+G+L TPV++S      L NLPAYR  +SPLLRG+E+G+AHG+FL+GPF
Sbjct: 3   EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62

Query: 118 VKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPD 177
            K GPLR T  A  AG L++ GLI+IL+ CL+MYG  SF               R  + D
Sbjct: 63  DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKD 122

Query: 178 PLQTADGWAKFSGGFFFGGISGVIWAYFLL 208
           PLQTA+GW +F+ GF  G + G  +AY LL
Sbjct: 123 PLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138

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BLAST of Cucsat.G8728 vs. NCBI nr
Match: NP_001267647.1 (photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >KGN61263.1 hypothetical protein Csa_006403 [Cucumis sativus] >BAA11677.1 subunit of photosystem I [Cucumis sativus])

HSP 1 Score: 424 bits (1091), Expect = 1.18e-149
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Cucsat.G8728 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 423 bits (1087), Expect = 4.80e-149
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Cucsat.G8728 vs. NCBI nr
Match: Q39654.1 (RecName: Full=Photosystem I reaction center subunit XI, chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V; Flags: Precursor [Cucumis sativus] >BAA09047.1 PsaL [Cucumis sativus])

HSP 1 Score: 422 bits (1086), Expect = 6.82e-149
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Cucsat.G8728 vs. NCBI nr
Match: XP_038889551.1 (photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida])

HSP 1 Score: 421 bits (1082), Expect = 2.78e-148
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKNPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Cucsat.G8728 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 414 bits (1064), Expect = 1.54e-145
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cucsat.G8728 vs. ExPASy TrEMBL
Match: A0A0A0LHJ8 (PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 5.71e-150
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Cucsat.G8728 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.32e-149
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Cucsat.G8728 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 7.46e-146
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Cucsat.G8728 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 412 bits (1059), Expect = 4.32e-145
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cucsat.G8728 vs. ExPASy TrEMBL
Match: A0A6J1FBZ4 (PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 5.04e-144
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
           MA+ATSPIASQLSS+F SSNTRALI+PKGLS SPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

The following BLAST results are available for this feature:

BLAST of Cucsat.G8728 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39654	4.8e-117	99.54	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q9SUI4	1.4e-92	78.54	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q41385	2.9e-90	76.71	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
P23993	6.7e-79	70.18	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
P51222	3.9e-34	50.00	Photosystem I reaction center subunit XI OS=Porphyra purpurea OX=2787 GN=psaL PE...	[more]

BLAST of Cucsat.G8728 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267647.1	1.18e-149	100.00	photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >KGN61...	[more]
XP_008441854.1	4.80e-149	99.08	PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo...	[more]
Q39654.1	6.82e-149	99.54	RecName: Full=Photosystem I reaction center subunit XI, chloroplastic; Short=PSI...	[more]
XP_038889551.1	2.78e-148	98.62	photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida]	[more]
XP_022149833.1	1.54e-145	96.77	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]

BLAST of Cucsat.G8728 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHJ8	5.71e-150	100.00	PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1	[more]
A0A1S3B555	2.32e-149	99.08	PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1	[more]
A0A6J1D7U0	7.46e-146	96.77	PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1	[more]
A0A6J1HKH3	4.32e-145	95.85	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1	[more]
A0A6J1FBZ4	5.04e-144	95.39	PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 59..211 e-value: 3.5E-58 score: 195.5
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	1.20.1240.10	Photosystem I PsaL, reaction centre subunit XI	coord: 54..217 e-value: 1.1E-72 score: 244.7
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 60..216
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8728.T1	Cucsat.G8728.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I