Cucsat.G7603 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G7603
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	GATA transcription factor 16-like
Location	ctg1528: 5226982 .. 5228876 (+)
RNA-Seq Expression	Cucsat.G7603
Synteny	Cucsat.G7603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCTTCTGATATTTTATCCTTACACTTACATATCCTAATTCAATGCTTAAGATAAGATTTGTTTTAGAAAAGAAATATGTAGGGAAGAAGAAACGACGTGGAGTGGAACGGTGGAATAGGGTGTCGTGTCATTCAGAAGCCTTCTCCTTCCCTGCAAAATCAGAAGAATTGCAATGGCACTTTTGTCAATCCTTTCCTTAACCCCATTTCTCCATTACTAGGGTTTTACAGTGTCGCGTAGGGTTTCTCCGTCATCTTCAGTCTTATCTCTTTTCTTTCTCTCTCTCTCTTTCAGTCTCTGTCGGTTCTGCTCTCTGTTTTTTCTTTTTTCTTTTTTTTTTCAGTAATGATCTTACATTCTCCCCTTCTTTATCTCCCTCATTCATTTTTCTCCCTAAATCCTGAAATGGGTTTCATGGATTTAAGCCAAAAGGTTAGTTTCATATCCCCTTTCACACGAATCTTTGTTATTTTTTTACTGATTTTTGTTAATTCTAATTTCTCTGTATTAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACTAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCTAAGGTTCTTTCCTTTCTTTATCTTTTCGTTTTTTTTTTTCTTTTTTTCCTTTTCTGTTTGTCTTTTGGTTTTCTGGATTGCTTTTGTTGAGAAGATTTGCCTTCTCCATTGCTTCTTCACCCTGTTCTATTGTCTACCATTTTTCTTTTGTTTAGTCTTGAGTTTATGAGTTTTGATTCATGATCTATTTATGATTCGTAATTTTCCCTTGAAACAAACTGTGTTTCTACTGTTTGATTTCAGGCTTTTTTTTCAGGATCATGTTCTGTTTTGGCACTTATTTCACTAGAATTTTGTGTTTCTCCTTTGTTCCTGAAGTTGATCCTCCTTTCCATTTTGTTCTATTTTTAATGGGTTTCTCCTGTTTTCGATTAGATGATAAGATTTCCCTTTCAATTTATTTGTATGATCTTAAGCCTCTGGTTTGGTTTCACATTCTTTTGTTCCGTTTTCATTTCTTGTTGAAATAGGAAATCATCATATCATCAATAATTAAACAAACCTCTCTTCCCATCTGGGATATATTCTTGCAGTCACTGTGTAATGCATGTGGGATTAGATTTAGAAAGAGAAGAATATCCACCAGAGGAACGAACAGACGTGACAAGAAGAGGGAAAAAGTTCACGACAATCACTCCTCCGCCGTTGCCACCGTGTCAGCCACCACCACTTCCTCAAGTGGGACGACCATCACCACCACCACCTCCTCCTCCGGCGTGGATGGAGATGAGAATTCAGGGGAGTGTGGGTCATTGAGAATGAGACTAATGATGTCATTGGAGGAGGATGTGATGGTGGTGAAGAAACAGCAGTGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAGAAGCAAGCAGCCATGTCTTTAATAGCGCTGTCGAATGACTCTCTAATTTCCTGAGGAAGAAGAAAGGAAGAAGGTACAGAGTTAGGATTTAGTAATTTACTCATAGAAGTTCTAACCTATAATACTAATTACCAACCAAATCATCACTTTTTTGGGGTTCAAAATGAATGAAATTGGAAGAAGACTAGTAATTGGATTCCTTTCCAAAAATGTTAGTTTTAGCATTTAGGCAATGAAGAAGGACATTGGGGAATTCAAAATGATATTACGTGTAGTTGTAGTGTTTTTATTTTCTAATGATGTGTAGGTATGCCAAAAAAAGTAGTACTACAAATTAGCCCTTCCTCTCTTAACCTAATTTGTGTTATAAGTACTTTGGTTCTAATTATTTCTCAATCATGGGTATGGGTTGACGTAGTTCATCAAAAAGGATGGAGCAGTCCCATCTAATTC

Coding sequence (CDS)

ATGATCTTACATTCTCCCCTTCTTTATCTCCCTCATTCATTTTTCTCCCTAAATCCTGAAATGGGTTTCATGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACTAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCTAAGTCACTGTGTAATGCATGTGGGATTAGATTTAGAAAGAGAAGAATATCCACCAGAGGAACGAACAGACGTGACAAGAAGAGGGAAAAAGTTCACGACAATCACTCCTCCGCCGTTGCCACCGTGTCAGCCACCACCACTTCCTCAAGTGGGACGACCATCACCACCACCACCTCCTCCTCCGGCGTGGATGGAGATGAGAATTCAGGGGAGTGTGGGTCATTGAGAATGAGACTAATGATGTCATTGGAGGAGGATGTGATGGTGGTGAAGAAACAGCAGTGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAGAAGCAAGCAGCCATGTCTTTAATAGCGCTGTCGAATGACTCTCTAATTTCCTGA

Protein sequence

MILHSPLLYLPHSFFSLNPEMGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS

Homology

[Close]

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 37 KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS 75
          +CC +CKTTKTP+WRGGPTGPKSLCNACGIR RK+R S
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12
Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 35  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSS 94
           + K C  C T+KTPLWRGGP GPKSLCNACGIR RK+R  T  +NR + K++K H+ +  
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKR-RTLISNRSEDKKKKSHNRNPK 98

Query: 95  AVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQW 154
                                      GD       SL+ RLM    E +M     + Q 
Sbjct: 99  F--------------------------GD-------SLKQRLMELGREVMMQRSTAENQR 147

Query: 155 QRKVGEEEKQAAMSLIALSNDSLI 179
           + K+GEEE QAA+ L+ALS  S +
Sbjct: 159 RNKLGEEE-QAAVLLMALSYASSV 147

[Close]

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12
Identity = 59/141 (41.84%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 37  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKVHDNHSSAV 96
           K C DC T+KTPLWRGGP GPKSLCNACGIR RK+R   RG    +KK +K         
Sbjct: 36  KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR---RGGTEDNKKLKK--------- 95

Query: 97  ATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQR 156
                              SSSG  G+   GE  SL+  LM     D+ + K+   + QR
Sbjct: 96  -------------------SSSG-GGNRKFGE--SLKQSLM-----DLGIRKRSTVEKQR 137

Query: 157 KVGEEEKQAAMSLIALSNDSL 178
           +   EE+QAA+ L+ALS  S+
Sbjct: 156 QKLGEEEQAAVLLMALSYGSV 137

[Close]

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 33/50 (66.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 25  DLSQKGL--LLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRR 73
           D SQ+ L   L   + C DC TTKTPLWR GP GPKSLCNACGIR RK R
Sbjct: 162 DESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 211

[Close]

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 55/154 (35.71%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 35  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNRRDKKREKV----- 94
           DTK  CVDC T +TPLWRGGP GPKSLCNACGI+ RK+R +  G    +KK+ +      
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNN 98

Query: 95  -----HDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSLEED 154
                H N       +                +        N G    L +   + + + 
Sbjct: 99  DLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKR 158

Query: 155 VMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSL 178
             V KK+ W   RK+GEEE+ AA+ L+ALS  S+
Sbjct: 159 SAVEKKRLW---RKLGEEER-AAVLLMALSCSSV 188

[Close]

BLAST of Cucsat.G7603 vs. NCBI nr
Match: XP_011659732.1 (GATA transcription factor 16 [Cucumis sativus] >KGN66031.1 hypothetical protein Csa_006937 [Cucumis sativus])

HSP 1 Score: 303 bits (776), Expect = 3.45e-103
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 80
           MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 81  RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 140
           RDKKREKV+DNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL
Sbjct: 61  RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 120

Query: 141 EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 179
           EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
Sbjct: 121 EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]

BLAST of Cucsat.G7603 vs. NCBI nr
Match: XP_008450587.1 (PREDICTED: GATA transcription factor 16-like [Cucumis melo])

HSP 1 Score: 286 bits (731), Expect = 5.13e-96
Identity = 154/181 (85.08%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MILHSPLLYLPHSFFSLNPEMGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MIL SPLL LP S F LNPEMGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSS 120
           CNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT+S 
Sbjct: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTS- 120

Query: 121 GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI 179
           GVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLI
Sbjct: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180

[Close]

BLAST of Cucsat.G7603 vs. NCBI nr
Match: TYK10277.1 (GATA transcription factor 16-like [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (637), Expect = 1.03e-81
Identity = 139/180 (77.22%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLC 80
           MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLC
Sbjct: 1   MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKEIFISSIKQTSLPIWGFLQSLC 60

Query: 81  NACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSG 140
           NACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT+S G
Sbjct: 61  NACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTS-G 120

Query: 141 VDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 179
           VDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Sbjct: 121 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 179

[Close]

BLAST of Cucsat.G7603 vs. NCBI nr
Match: XP_038880207.1 (GATA transcription factor 17-like [Benincasa hispida])

HSP 1 Score: 239 bits (610), Expect = 1.67e-77
Identity = 137/187 (73.26%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 1   MILHSPLLYLPHSFFSLNPEMGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MIL SP L LPHS   LN EMG MDL QKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILRSPRLSLPHSICFLNREMGMMDLRQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRRISTRGTNRR-DKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSG 120
           CNACGIRFRKRRIST GTNR  D+KRE+VH+N S+   TVSATT SS+GTT TTT+ S  
Sbjct: 61  CNACGIRFRKRRISTIGTNRGYDRKRERVHNNGSTITTTVSATT-SSTGTTTTTTSGSGD 120

Query: 121 VDGDENSGECGSLRMRLMMSLEEDVMVV-------KKQQWQWQRKVGEEEKQAAMSLIAL 179
            DGDEN GECGSL MRLMM+LEE+VMVV       KKQ++Q +RK+GEEEKQAA+SL+AL
Sbjct: 121 GDGDENLGECGSLGMRLMMALEEEVMVVQNLPSSVKKQRFQRERKLGEEEKQAAVSLMAL 180

[Close]

BLAST of Cucsat.G7603 vs. NCBI nr
Match: KAG6588601.1 (GATA transcription factor 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155 bits (392), Expect = 1.03e-44
Identity = 104/167 (62.28%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLAD------TKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS 80
           MG MD++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKRRIS
Sbjct: 1   MGMMDVTQKGLLLRTQLQDQTNKCCVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRRIS 60

Query: 81  T-RGTNRRDKKREKVHDNHSSAVATVSATTTSSSGTT-ITTTTSSSGV-DGDENSGECGS 140
           T RG  R   K+E+ H   S+A+  VSATT+SSSGTT I TTTS  G  DG+E+ GEC S
Sbjct: 61  TNRGYVR---KKERPHS--STAMGAVSATTSSSSGTTAINTTTSGGGSGDGEEDLGECRS 120

Query: 141 LRMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSL 177
           LRMR+MM   E+V+VV+     Q Q K+GEEE QAA+ L+ALS  S+
Sbjct: 121 LRMRVMMPFREEVVVVQNASSVQKQGKLGEEE-QAAVLLMALSCGSV 161

[Close]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL
Match: A0A0A0M1G9 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569090 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 1.67e-103
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 80
           MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 81  RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 140
           RDKKREKV+DNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL
Sbjct: 61  RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 120

Query: 141 EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 179
           EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS
Sbjct: 121 EEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL
Match: A0A1S3BQ71 (GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103492133 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 2.49e-96
Identity = 154/181 (85.08%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MILHSPLLYLPHSFFSLNPEMGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MIL SPLL LP S F LNPEMGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSS 120
           CNACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT+S 
Sbjct: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTS- 120

Query: 121 GVDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLI 179
           GVDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLI
Sbjct: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180

[Close]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL
Match: A0A5D3CE96 (GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004280 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 4.97e-82
Identity = 139/180 (77.22%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLC 80
           MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLC
Sbjct: 1   MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKEIFISSIKQTSLPIWGFLQSLC 60

Query: 81  NACGIRFRKRRISTRGTNR--RDKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSG 140
           NACGIRFRKR+I TR TNR  RDKKRE+V DNHSS VA VSATTTSSSGTT TTTT+S G
Sbjct: 61  NACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTS-G 120

Query: 141 VDGDENSGECGSLRMRLMMSLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 179
           VDGDENSGECGS RM++MM LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Sbjct: 121 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 179

[Close]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL
Match: A0A6J1F048 (GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111437809 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 5.00e-45
Identity = 101/166 (60.84%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 21  MGFMDLSQKGLLLAD------TKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIS 80
           MG M+++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKRRIS
Sbjct: 1   MGMMEVTQKGLLLRTQLQDQTNKCCVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRRIS 60

Query: 81  TRGTNRRDKKREKVHDNHSSAVATVSATTTSSSGTT-ITTTTSSSGV-DGDENSGECGSL 140
           T     R   R+K   N S+A+  VSATT+SSSGTT I TTTS  G  DG+E+ GEC SL
Sbjct: 61  TN----RGYVRKKERPNSSTAMGAVSATTSSSSGTTAINTTTSGGGSGDGEEDLGECRSL 120

Query: 141 RMRLMMSLEEDVMVVKK-QQWQWQRKVGEEEKQAAMSLIALSNDSL 177
           RMR+MM   E+V+VV+     Q Q K+GEEE QAA+ L+ALS  S+
Sbjct: 121 RMRVMMPFREEVVVVQNASSVQKQGKLGEEE-QAAVLLMALSCGSV 161

[Close]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL
Match: A0A6J1C5A4 (GATA transcription factor 17-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007526 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 4.42e-43
Identity = 101/169 (59.76%), Postives = 120/169 (71.01%), Query Frame = 0


Query: 20  EMGFMDL---SQKGLLLADTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRIST 79
           EMG MD+     K  +  DTK  CVDCKTTKTPLWRGGP GPKSLCNACGIRFRKRR+ST
Sbjct: 54  EMGMMDVLRRKNKERVEDDTKKYCVDCKTTKTPLWRGGPAGPKSLCNACGIRFRKRRVST 113

Query: 80  RGTNRR-DKKREKVHDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENS---GECGS 139
            GTNR  D+KREK H +  S  A +SATT SSS T     +++ G DG+E     GECGS
Sbjct: 114 IGTNRGCDRKREKAHSHGGSTTAAMSATT-SSSATAADAKSNNGGADGEEEEEDLGECGS 173

Query: 140 LRMRLMMSLEEDVMV---VKKQQWQWQRKVGEEEKQAAMSLIALSNDSL 177
           LRMRLMM+L E+V+V   + KQ+    RK+GEEE QAA+SL+ALS  S+
Sbjct: 174 LRMRLMMALGEEVVVQQNISKQRPP--RKLGEEE-QAAVSLMALSCGSV 218

The following BLAST results are available for this feature:

BLAST of Cucsat.G7603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC59	2.4e-13	81.58	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q8LG10	2.6e-12	39.58	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9FJ10	2.6e-12	41.84	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q6YW48	1.4e-10	66.00	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]
Q9LIB5	3.2e-10	35.71	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]

BLAST of Cucsat.G7603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659732.1	3.45e-103	99.37	GATA transcription factor 16 [Cucumis sativus] >KGN66031.1 hypothetical protein ...	[more]
XP_008450587.1	5.13e-96	85.08	PREDICTED: GATA transcription factor 16-like [Cucumis melo]	[more]
TYK10277.1	1.03e-81	77.22	GATA transcription factor 16-like [Cucumis melo var. makuwa]	[more]
XP_038880207.1	1.67e-77	73.26	GATA transcription factor 17-like [Benincasa hispida]	[more]
KAG6588601.1	1.03e-44	62.28	GATA transcription factor 16, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G7603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1G9	1.67e-103	99.37	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569090 P...	[more]
A0A1S3BQ71	2.49e-96	85.08	GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103492133 PE=4 S...	[more]
A0A5D3CE96	4.97e-82	77.22	GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1F048	5.00e-45	60.84	GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111437809 ...	[more]
A0A6J1C5A4	4.42e-43	59.76	GATA transcription factor 17-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 33..85 e-value: 2.5E-14 score: 63.6
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 39..72 e-value: 2.2E-17 score: 62.4
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 39..64
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 39..87 score: 12.966939
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 39..85 e-value: 7.85956E-14 score: 60.8494
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 35..95 e-value: 4.0E-16 score: 60.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..126
None	No IPR available	PANTHER	PTHR47172:SF9	GATA TRANSCRIPTION FACTOR 16	coord: 35..177
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 35..177
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G7603.T1	Cucsat.G7603.T1	mRNA
Cucsat.G7603.T2	Cucsat.G7603.T2	mRNA
Cucsat.G7603.T3	Cucsat.G7603.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding