Cucsat.G6847 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6847
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	mitochondrial import receptor subunit TOM20-like
Location	ctg1522: 719077 .. 720605 (-)
RNA-Seq Expression	Cucsat.G6847
Synteny	Cucsat.G6847

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTATCATGGAAATATGATAATGAAATTAAATATATAGTTTAAATTTGATGTTTACCAAGCAATTTTATGACTTAAGCTTAAGAATTATATAAAGAGGGAATAAAAGATATTGTTTCAACCACAATTATCGAAATGGGCCTCTTCAGACGAAATTTGGCCCAAAACAAAATCTCTATGACTCGGAACCCTACCGGTTGTGTAGTCATTCGTTCCGAAATCGCCATAGAGAAGCTCTGTTTCTCTGCTCGGAGCTCAAATCTTAATTCCTAGCTTGTCGTCGGAATCCATTCCTCAACCATGGAGTTTTCTCAGGATGATTTTGATCGGCTTCTTCTCTTCGAGCACACTCGAAAAACCGCCGAAGCTAACTACGCCGCCAACCCACTTGATGCCGATGTATTTCCTTCTTTCTTTCTTTCATCCCTCATCTATTATCTCGTTTCGTGTTTTTTATCATATCTTTATCTGCTTTTACTTATCGTTGAACTTGATATCCATCACCAATTTTCGTTGTGTGTATGTGCTGAATTACTGTTTTCCGGGAAGGGTAACTTAAGCTGTTGGAAATGGTATCCTGTCGTCTTATCGTTCCTTTTATGTGTTTTTTTTTTTCCAGAATTTGACCAAGTGGGGAGGAGCATTGCTTGAGTTATCTCAATTTCAGAGTGTTTCTGATTCCAAAAATATGATCAAAGGTATTTTCATTGCCCTACTAAATGTTTAAGAATATGGATTGGCTGTAATATTCAATGATGAACTAACGAATACGAACGAGAACAAACTCAATTTGATATTGCAGACGCTGTTGGGAAGCTGGAGGAAGCTTTGACTATTAATCCCACGAAGCATGATGCTCTTTGGTGTATTGGAAATGCTCACACTTCACAAGCTTTTCTGACTCCCGATAGGGATGAGGCCCAAGTCTATTTCGATAAAGCACAGGAGTGTTTTCAGAAGGCACTAGATGAGGTGATATATGTGGATTTGATTGAATTAGTCTGACTTTTGAATTCATTAAACATTAATTGATTCTAAATAGTTGAGATTTTTTTCCTCAGGATCCTGGTAATGAACTATATCACAAGTCCCTGGAAGTCGCTGCAAAGGTGAGGATATAATATAACTCTGTCATTTGATTTTCAGTTTGCATTGAATTTCTTGGAAGTGATTTACTTCAGAGATAAAATCTACAGTGCAGCGCCTTTTGGGTTCTCTATACTTTGTAGGTTCGGTAGTTGGGGCTCTAGGACAGTGTGGTATTAGTAACTATGGAGTCCATTTCTTCGAGCAATTCTGATTCTTACTGTTAGTTTTACTTGGTTTTAATCTTTGGGGTTTTTAAGCCACATGCATAATAGAGTTTAGATTGGATTGGGGATGACCCATTAAAGCGGGGTAGGTTGTGCTTATGTGGTAAAATCCTCTTCCTCTATCCACCTAAATTTTCATGTCATTGTTGATAGAGTCTAAGAAAAATTTCGATCATCATAGTGCCATCTTAACTTTCTGGAAAGTAATTTAATCAATTTGTCTAGGAAGTTCAGAATATTCTTAAGCATTGTCACTGTTAATATAGTGTATTGGTATAATGATAGACCTCCGATACTATATCAGTATAGTAGGAGAGGGAAGAAGGGTAGTGGCACGGCATGTGTGTAGAGTGACGTGTGAGTTAGGTTAGTATAAATAAAGAAAAAATGTTGGGAGGGAAAAGGGAGTTAGAAACTTTGAAGGAGTAGATTTCTGTTCTTCCTTGAGAGATAGGATAACAGGAGAGGATTTACAGCTTTAGTGTGTGTAACCTAGATTCAGTTTGAATCTATTATCAATAAAAGTAGAATTCTCTTAGTTTCTGGATTCCATCATATAATTATATATATTATTCGAAAGATCAGTGGGGATATAATTATGTTCAATACAAGCGTGTGTTTTTCTGTCATGTTTCCTTCAAATATTTCTGCTCACTGTCTTTGCAGAGAAGGTTGAAAAACTTTAGGGTCAATGCTTTTGTTACTATATTTTGGGTGCTCTGGTTGGTTAGATATGGGTTAATGTTTGATGAAAATTTGACTAGTATTGGAAGATACTGTTGAATCCTTTATTTTTCTCTTTTGGGTTCTAGATGGTGATGGTGCTCCACAGAAAAAAAATGACATTGAATGGAGATGAGGAATGGGAATGAGACATAGATATTAATCCCATATAGGATGGAGGAGTTGTCATATCTTATCTTATGTTTTACTGAATTAATGACTGATAAGTTCCTACAGGGATGTAGAAACTGAAAGTATTGTCATTATCTGATGTTATGTTGCCTCAGGCGCCGGGGTTCCATTCGGAGATCCACAAGCATGGTTCCAGTCAACAGAGTGCAGGGTCTTCAGGCGGGGGAGCTACTGCTGCTTCAAACCCAAAGGTTACTAGTCATGGAGCTTTTTCTCTTCTTTTGGCAAAGCATATGGTCCATCTGCTAATGAAGTTTGTTTGTTGTGGTTCAATTCATAAACACCAGAGTTCCAAGAAGAAGAGCAGCGATCTAAAGTATGACATATTTGGATGGGTCATCCTTGCTGTTGGAATCGTTGCATGGGTTGGAATGACAAAATCTCATGTTCCACCTCCTCCTTCGAGGTGAAACTTTTAGATTCTGGAACTGCAAACCTACTCTTCTGAAAAGTCTCTTTGAGGGTATGCCCTGCCCCTCATGGAAGTGCCCAACAGGCTACAATGAAAAAGAATCTCTTCATTGTGATGCAGAATACCTGCCTTCTTCCTGGTATTTAACTCGTAAGTGTTTCTCATTTCTAGTGTACCTGGTTTAGCTTTGAGATCATTTTTGTTTAGTTGATAATTAGCCAAAATCTCAAATCTGCTGTAGCATAACAGTGGTTTTTTTTTTTTATATCAAAGATATAAAGTATTTGAACTTGTAGTTGGTTTGGTTGAATGATATTAATCATTCCATTTTTAGACTTTTGCCTTTTGGTATTCCTGTGGTAACAAGCAGCCTGATTATATGAAGAATTTCAACTGGGAGAACGTTTATTCGTTTTTGTAATTGGTTGAGTAGTGTTTCTATGTCGATTCATTCACTTTTTAGCCTTTTGCTTTTTGGTATTCCTTTGGTAACAAGCATCCTTATCATATGAAGAATTTCAGCTGTGAGAATGTTCACTGGTTTTTGTAGTTTTAGAACTTGCATTTTGATGGCTAGATTCGGT

Coding sequence (CDS)

ATGGAGTTTTCTCAGGATGATTTTGATCGGCTTCTTCTCTTCGAGCACACTCGAAAAACCGCCGAAGCTAACTACGCCGCCAACCCACTTGATGCCGATAATTTGACCAAGTGGGGAGGAGCATTGCTTGAGTTATCTCAATTTCAGAGTGTTTCTGATTCCAAAAATATGATCAAAGACGCTGTTGGGAAGCTGGAGGAAGCTTTGACTATTAATCCCACGAAGCATGATGCTCTTTGGTGTATTGGAAATGCTCACACTTCACAAGCTTTTCTGACTCCCGATAGGGATGAGGCCCAAGTCTATTTCGATAAAGCACAGGAGTGTTTTCAGAAGGCACTAGATGAGGATCCTGGTAATGAACTATATCACAAGTCCCTGGAAGTCGCTGCAAAGGCGCCGGGGTTCCATTCGGAGATCCACAAGCATGGTTCCAGTCAACAGAGTGCAGGGTCTTCAGGCGGGGGAGCTACTGCTGCTTCAAACCCAAAGAGTTCCAAGAAGAAGAGCAGCGATCTAAAGTATGACATATTTGGATGGGTCATCCTTGCTGTTGGAATCGTTGCATGGGTTGGAATGACAAAATCTCATGTTCCACCTCCTCCTTCGAGGTGA

Protein sequence

MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYHKSLEVAAKAPGFHSEIHKHGSSQQSAGSSGGGATAASNPKSSKKKSSDLKYDIFGWVILAVGIVAWVGMTKSHVPPPPSR

Homology

[Close]

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot
Match: P92792 (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM20 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.8e-53
Identity = 95/128 (74.22%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 5   QDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGK 64
           Q +FDRLL FEH RK+AE  YA NPLDADNLT+WGGALLELSQFQ V++SK MI DA  K
Sbjct: 4   QSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSK 63

Query: 65  LEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYH 124
           LEEALT+NP KHDALWC+GNAHTS  FLTPD DEA+VYF+KA +CFQ+A D DP N+LY 
Sbjct: 64  LEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYR 123

Query: 125 KSLEVAAK 133
           KSLEV AK
Sbjct: 124 KSLEVTAK 131

[Close]

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot
Match: P82873 (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN=TOM20-2 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 6.3e-43
Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFS  DF+RL++FEH RK +EA Y  +PLD++NL KWGGALLELSQFQ + ++K M+ D
Sbjct: 1   MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLND 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           A+ KLEEALTINP KH ALWCI NA+T+ AF   D +EA+ +FDKA E FQ+A +EDPGN
Sbjct: 61  AISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGN 120

Query: 121 ELYHKSLEVAAK 133
           + Y KSL+ + K
Sbjct: 121 DTYRKSLDSSLK 132

[Close]

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot
Match: P82874 (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN=TOM20-3 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-40
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 4   SQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVG 63
           ++ +FDR+LLFE  R+ AE  Y +NPLDADNLT+WGG LLELSQF S+SD+K MI++A+ 
Sbjct: 3   TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAIT 62

Query: 64  KLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELY 123
           K EEAL I+P K +A+WCIGNA+TS AFLTPD  EA+  FD A + FQ+A+DE P N  Y
Sbjct: 63  KFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 122

Query: 124 HKSLEVAAK 133
            KSLE+ AK
Sbjct: 123 LKSLEMTAK 131

[Close]

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot
Match: P82805 (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana OX=3702 GN=TOM20-4 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.7e-36
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 5   QDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGK 64
           Q++ +RL++FEH RK AEA Y  NPLDA+NLT+W GALLELSQFQ  ++ K MI +A+ K
Sbjct: 4   QNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQ--TEPKQMILEAILK 63

Query: 65  LEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYH 124
           L EAL I+P KHDALW IGNAH S  FL+ D+ EA   F+KA + FQ A++E P +ELY 
Sbjct: 64  LGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYR 123

Query: 125 KSLEVAAK 133
           KSL +A+K
Sbjct: 124 KSLTLASK 129

[Close]

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot
Match: P82872 (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana OX=3702 GN=TOM20-1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-34
Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 9   DRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGKLEEA 68
           D+L  FE  RK AE  Y  NP DADNL +WG ALLELSQFQ+V DS  MI+DA+ KLE+A
Sbjct: 2   DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDA 61

Query: 69  LTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYHKSLE 128
           + I+P KHDA+WC+GNA+TS A LTPD  +A++ F  A   F  A+ + P N++YHKSLE
Sbjct: 62  ILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLE 121

Query: 129 VAAK 133
           +A K
Sbjct: 122 MADK 125

[Close]

BLAST of Cucsat.G6847 vs. NCBI nr
Match: XP_004142933.1 (mitochondrial import receptor subunit TOM20 [Cucumis sativus] >KGN62378.1 hypothetical protein Csa_018630 [Cucumis sativus])

HSP 1 Score: 267 bits (683), Expect = 4.02e-89
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD
Sbjct: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVEKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. NCBI nr
Match: XP_008444452.1 (PREDICTED: mitochondrial import receptor subunit TOM20-like [Cucumis melo])

HSP 1 Score: 262 bits (669), Expect = 5.45e-87
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVS+SKNMIK+
Sbjct: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSESKNMIKE 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVVKLEEALAINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. NCBI nr
Match: KAA0061007.1 (mitochondrial import receptor subunit TOM20-like [Cucumis melo var. makuwa])

HSP 1 Score: 260 bits (665), Expect = 2.22e-86
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDR LLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVS+SKNMIK+
Sbjct: 1   MEFSQDDFDRFLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSESKNMIKE 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVVKLEEALAINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. NCBI nr
Match: XP_038884092.1 (mitochondrial import receptor subunit TOM20-like [Benincasa hispida])

HSP 1 Score: 239 bits (611), Expect = 4.23e-78
Identity = 116/132 (87.88%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDRLLLFEH RKTAEANYA+NPLDADNLTKWGGALLELSQFQSVSDSKNMIK+
Sbjct: 1   MEFSQDDFDRLLLFEHARKTAEANYASNPLDADNLTKWGGALLELSQFQSVSDSKNMIKE 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INP KHDALWC+GNAHTS AFLTPD DEA++YFDKA ECFQ ALDEDP N
Sbjct: 61  AVVKLEEALAINPAKHDALWCLGNAHTSHAFLTPDGDEAKIYFDKAHECFQNALDEDPSN 120

Query: 121 ELYHKSLEVAAK 132
           ELY KSLEV AK
Sbjct: 121 ELYRKSLEVNAK 132

[Close]

BLAST of Cucsat.G6847 vs. NCBI nr
Match: KAG7029258.1 (Mitochondrial import receptor subunit TOM20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239 bits (609), Expect = 1.04e-77
Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQ+DFDRLLL EHTRKTAEANYA NPLDADNLTKWGGALLELSQFQ+VSDSK+MIKD
Sbjct: 1   MEFSQEDFDRLLLSEHTRKTAEANYANNPLDADNLTKWGGALLELSQFQNVSDSKDMIKD 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWC+GNAHTS AFLTPD DEA+VYFDKA ECFQKA+DEDP N
Sbjct: 61  AVVKLEEALAINPTKHDALWCLGNAHTSNAFLTPDADEAKVYFDKAHECFQKAVDEDPSN 120

Query: 121 ELYHKSLEVAAKV 133
           ELY KSLEV AK+
Sbjct: 121 ELYRKSLEVTAKL 133

[Close]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL
Match: A0A0A0LKR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351590 PE=3 SV=1)

HSP 1 Score: 267 bits (683), Expect = 1.95e-89
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD
Sbjct: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVEKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL
Match: A0A1S3BAF4 (mitochondrial import receptor subunit TOM20-like OS=Cucumis melo OX=3656 GN=LOC103487773 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 2.64e-87
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVS+SKNMIK+
Sbjct: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSESKNMIKE 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVVKLEEALAINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL
Match: A0A5A7V2B7 (Mitochondrial import receptor subunit TOM20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001420 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 1.07e-86
Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQDDFDR LLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVS+SKNMIK+
Sbjct: 1   MEFSQDDFDRFLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSESKNMIKE 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN
Sbjct: 61  AVVKLEEALAINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120

Query: 121 ELYHKSLEVAAK 132
           ELYHKSLEVAAK
Sbjct: 121 ELYHKSLEVAAK 132

[Close]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL
Match: A0A6J1K4S5 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111491696 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 5.65e-77
Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQ+DFD LLL EHTRKTAEANYA NPLDADNLTKWGGALLELSQFQ+VSDSK+MIKD
Sbjct: 1   MEFSQEDFDSLLLSEHTRKTAEANYANNPLDADNLTKWGGALLELSQFQNVSDSKDMIKD 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL INPTKHDALWC+GNAHTS AFLTPD DEA+VYFDKA ECFQKA+DEDP N
Sbjct: 61  AVVKLEEALAINPTKHDALWCLGNAHTSNAFLTPDADEAKVYFDKAHECFQKAVDEDPSN 120

Query: 121 ELYHKSLEVAAK 132
           ELY KSLEV AK
Sbjct: 121 ELYRKSLEVTAK 132

[Close]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL
Match: A0A6J1HCL3 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111462401 PE=3 SV=1)

HSP 1 Score: 235 bits (599), Expect = 1.51e-76
Identity = 114/132 (86.36%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFSQ+DFDRLLL EH+RKTAEANYA NPLDADNLTKWGGALLELSQFQ+VSDSK+MIKD
Sbjct: 1   MEFSQEDFDRLLLSEHSRKTAEANYANNPLDADNLTKWGGALLELSQFQNVSDSKDMIKD 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           AV KLEEAL I+PTKHDALWC+GNAHTS AFLTPD DEA+VYFDKA ECFQKA+DEDP N
Sbjct: 61  AVVKLEEALAIDPTKHDALWCLGNAHTSNAFLTPDADEAKVYFDKAHECFQKAVDEDPSN 120

Query: 121 ELYHKSLEVAAK 132
           ELY KSLEV AK
Sbjct: 121 ELYRKSLEVTAK 132

[Close]

BLAST of Cucsat.G6847 vs. TAIR 10
Match: AT1G27390.1 (translocase outer membrane 20-2 )

HSP 1 Score: 174.9 bits (442), Expect = 4.5e-44
Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKD 60
           MEFS  DF+RL++FEH RK +EA Y  +PLD++NL KWGGALLELSQFQ + ++K M+ D
Sbjct: 1   MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLND 60

Query: 61  AVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGN 120
           A+ KLEEALTINP KH ALWCI NA+T+ AF   D +EA+ +FDKA E FQ+A +EDPGN
Sbjct: 61  AISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGN 120

Query: 121 ELYHKSLEVAAK 133
           + Y KSL+ + K
Sbjct: 121 DTYRKSLDSSLK 132

[Close]

BLAST of Cucsat.G6847 vs. TAIR 10
Match: AT3G27080.1 (translocase of outer membrane 20 kDa subunit 3 )

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 4   SQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVG 63
           ++ +FDR+LLFE  R+ AE  Y +NPLDADNLT+WGG LLELSQF S+SD+K MI++A+ 
Sbjct: 3   TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAIT 62

Query: 64  KLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELY 123
           K EEAL I+P K +A+WCIGNA+TS AFLTPD  EA+  FD A + FQ+A+DE P N  Y
Sbjct: 63  KFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 122

Query: 124 HKSLEVAAK 133
            KSLE+ AK
Sbjct: 123 LKSLEMTAK 131

[Close]

BLAST of Cucsat.G6847 vs. TAIR 10
Match: AT5G40930.1 (translocase of outer membrane 20-4 )

HSP 1 Score: 151.0 bits (380), Expect = 6.9e-37
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 5   QDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGK 64
           Q++ +RL++FEH RK AEA Y  NPLDA+NLT+W GALLELSQFQ  ++ K MI +A+ K
Sbjct: 4   QNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQ--TEPKQMILEAILK 63

Query: 65  LEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYH 124
           L EAL I+P KHDALW IGNAH S  FL+ D+ EA   F+KA + FQ A++E P +ELY 
Sbjct: 64  LGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYR 123

Query: 125 KSLEVAAK 133
           KSL +A+K
Sbjct: 124 KSLTLASK 129

[Close]

BLAST of Cucsat.G6847 vs. TAIR 10
Match: AT3G27070.1 (translocase outer membrane 20-1 )

HSP 1 Score: 145.6 bits (366), Expect = 2.9e-35
Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 9   DRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGKLEEA 68
           D+L  FE  RK AE  Y  NP DADNL +WG ALLELSQFQ+V DS  MI+DA+ KLE+A
Sbjct: 2   DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDA 61

Query: 69  LTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYHKSLE 128
           + I+P KHDA+WC+GNA+TS A LTPD  +A++ F  A   F  A+ + P N++YHKSLE
Sbjct: 62  ILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLE 121

Query: 129 VAAK 133
           +A K
Sbjct: 122 MADK 125

[Close]

BLAST of Cucsat.G6847 vs. TAIR 10
Match: AT3G27070.2 (translocase outer membrane 20-1 )

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16
Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 54  SKNMIKDAVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKA 113
           ++N  + A+ KLE+A+ I+P KHDA+WC+GNA+TS A LTPD  +A++ F  A   F  A
Sbjct: 107 TENDSRYAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIA 166

Query: 114 LDEDPGNELYHKSLEVAAK 133
           + + P N++YHKSLE+A K
Sbjct: 167 VAQQPDNQVYHKSLEMADK 185

The following BLAST results are available for this feature:

BLAST of Cucsat.G6847 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92792	8.8e-53	74.22	Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM2...	[more]
P82873	6.3e-43	61.36	Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P82874	3.8e-40	61.24	Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P82805	9.7e-36	58.59	Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P82872	4.1e-34	57.26	Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G6847 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142933.1	4.02e-89	99.24	mitochondrial import receptor subunit TOM20 [Cucumis sativus] >KGN62378.1 hypoth...	[more]
XP_008444452.1	5.45e-87	96.97	PREDICTED: mitochondrial import receptor subunit TOM20-like [Cucumis melo]	[more]
KAA0061007.1	2.22e-86	96.21	mitochondrial import receptor subunit TOM20-like [Cucumis melo var. makuwa]	[more]
XP_038884092.1	4.23e-78	87.88	mitochondrial import receptor subunit TOM20-like [Benincasa hispida]	[more]
KAG7029258.1	1.04e-77	87.22	Mitochondrial import receptor subunit TOM20 [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Cucsat.G6847 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKR5	1.95e-89	99.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351590 PE=3 SV=1	[more]
A0A1S3BAF4	2.64e-87	96.97	mitochondrial import receptor subunit TOM20-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7V2B7	1.07e-86	96.21	Mitochondrial import receptor subunit TOM20-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1K4S5	5.65e-77	87.12	mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HCL3	1.51e-76	86.36	mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Cucsat.G6847 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27390.1	4.5e-44	61.36	translocase outer membrane 20-2	[more]
AT3G27080.1	2.7e-41	61.24	translocase of outer membrane 20 kDa subunit 3	[more]
AT5G40930.1	6.9e-37	58.59	translocase of outer membrane 20-4	[more]
AT3G27070.1	2.9e-35	57.26	translocase outer membrane 20-1	[more]
AT3G27070.2	1.4e-16	49.37	translocase outer membrane 20-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF06552	TOM20_plant	coord: 8..195 e-value: 3.4E-91 score: 304.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..166
None	No IPR available	PANTHER	PTHR32409:SF7	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-2	coord: 1..204
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..151 e-value: 2.4E-71 score: 240.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 21..130
IPR010547	Plant specific mitochondrial import receptor subunit TOM20	PANTHER	PTHR32409	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6847.T1	Cucsat.G6847.T1	mRNA
Cucsat.G6847.T2	Cucsat.G6847.T2	mRNA
Cucsat.G6847.T4	Cucsat.G6847.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045040	protein insertion into mitochondrial outer membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding