Cucsat.G6644 (gene) Cucumber (B10) v3

Overview
NameCucsat.G6644
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionE3 ubiquitin-protein ligase
Locationctg1502: 256189 .. 257316 (+)
RNA-Seq ExpressionCucsat.G6644
SyntenyCucsat.G6644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTAAAATAAATAAATAAAAAACTAAACTTAATGAAAACACAAACACACATACTCTTTGTATTTTGCAAGATAAAGGATGGGAAGATATATTATTATTCTCTCTCACTCTCTCTCTCCCAATTATGAACCAATAAGCAAACAATCCCCAAAATTATAAATTGGGTCTTTCTCATCTCCATCTTCTTGATGTTGATGTCTTTTACACATTGAATTTCAATCAGGAAGAAAGAAGAAGAAGAATCTAAGATACAGTTAGTTGGGGTTTTTTTTTTTTTTAGCGTTTTGGATTAGCTCTCCACGTTGCCATTTCAAATTGGGCGGGCCACTCTGAGCTTCTCCTCTCTTCAACAATGCTGTGTGGCCAACCGCCATTCCCTCTCCTTCCTTTAAATATCTGTCTTTGAGGGCCACTCCTCCCGACACCTCCTTCAATCTTGCTAGTTGGATTTGGTGGCCAACCATTTACCTTCTTCAAAAAAACTACTTTCTTTTGTTTCTTTCTCTTATCCATTTTGAAAACCCCTTTGTGGGGTTTTGTTTATATCTCTCTATTTTGAATCTTGCAGGAGTATCTGGGTATGGAGGTTTGGAATTACTGATTATGACAGAAGAAGATTTGCGGTTCATTCAACTGTTGTAAGGAAAAAAAAAAAAAAAAGATTCGGTTGATTATTGATTCTTTCTTCTTCTCTATTTGGTCTTTTTTGTTTTGTTTTTTGGTTTCTTGAAGTTAGGCCAACGCCTTTCGCGTATCCTAAACCGTTTGATTGTTGATTTCATTTGAATTTCTCTGTTTTTTTTTTTTTTTTTTTTCCATTTTTCTTGAGTTTCTGGTCACCCTCTGCGACCCAACATCAACTTCCTGTCTTCTTTTTTTTCAACCGTTTTTTGTTGCCTTCTTCTTGCTCTTTATGCCTTTATATACGCCTTGATTCCAATTCTTTGTTTGTTATGGGATTCCCTTTTAAGGCTTCTCTCTGAATTGGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGCCTCACTGAATACCTTATAATTTGGGACATGAGACTTTCATGAATTTGGATGGTTTGCTTTTGTCCGAAATTGGGTTCCGTTTCTCTTTTAATCATTACGGGCAAAACTTGTGTGATTTTTGTTGTCTTCGTGGTTGGACTTGCCCTTTCCTTTTAGCTATCCTTTCATGAGAACCATCCCCTTTTCTTTCTTCATATTTCCAACTTTCTCCATGTCCGTGTAGTTTGTTGTCTTGTCTTGATAAGGAACCTGGTTGGTTTTAGTTGGAAAAGTTCATTTTGCAATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCATTTAATTCTGATGCTACTACGTCTTTCATATCAATTTCGGTGTCTGAAGAAGATGGCGCTATGGCTGATGATATCAGAAACGAAGCATCTGATTCTGTCCCCCCTTCCTTTTGGGTTAAAATGGCGATGAAAATATCTAGAGCTAGATGGTTTATTTTTTTGAGAAGAGTTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCTAATCCTTTCAATTCGGGTTCGTGGATGGCGATGGAACTTGTAGCTTTGTTGTTTCAGCTAATTATCTCGGCGTTTACCCTTGCCATTTCACAGGCTGAAAAGCCAGTTTGGCCTATGAGGTTGTGGATAGGTGGTTATGATCTCGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAATGCAGAGAGATGGTAACAGTCTTTCAGATATTGAACACGAACAGCAAAGGACCAATGAATCATCAAGGTAATCTTCAACCTACTAGTTTCCTATGAATTTATTTCATAGTTATTTCTTTGAAAAGCTAGTGAGGATTGAATTTAGATTGGACAAAGAAGCTTAGGGTCAATCATATTCTAACATTCTTTTCCCATAACGCTGAGGTTAAAAGTTCATGCAGTTTCTATGAGTCTTTATTTTACTCAAAAACTGAATTGAAGGATGGAAGATTTTCAAATGACCCACAGGGTTAAAAGTCATAATATTGTTTTATTGAAAATAAGTCAATGCAGACTAGGAGATCAATTAAGAGTAAACACAATATTTTATTGAGTTTCTATTTCTTCAATATTCAAAAAGTTTGCATCTGCAAAATTTGACCTCTAATCTGACTACTTTTATTCAACATAATTTCAGGTATTCACATTTGATGAACCGATGCCGCACGTCTCTCGATCTTTTCTTTGCGATATGGTTTGTAATGGGCAATCTTTGGGCCTTCGATTCTCGCTTAGCCTCGTTCCAGAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTACAGGGTATAACATTAACACGGGATCAACTGAAAAAGGAGCATCAGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCAGTTGAAGCCAACATCAACCCCCGAAGTCAACTCGACAATAGCAATACAGGACTTCTAAAAGAGGATCCAGTAAGTAATAATTCTCTTCCTGGTTTTGAAAAAACTACAATAGAAAATTCAAATAGAAAGAGCGATGGGGGATTAAAATACTTCTGGTTGCCTTCGGTTTTGCAGGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTACCTTGTTCCCATGTGTTTCATCTCAGGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAGAGAGCCAAGAAATTAGTATAAGCAGTTTAAGTGCTTCATTGGGTTTTTTCTTTTCTTTTCCCCTTCCAAATGGAAATTTTCTGATTTTCACTGTTTTTATGATTTAGTCAGTAGATTAGAGTCCCACATGGTTACTTGAGTGAATTCTAGAGCTCACCAGTTACCTAATTATACTCAAATACTCGAGGTTACATATAGCAGGAAAATGATGCCTTATTTGTAAATATTGTGAGAACTATAGTATTTGCCTAATGAATACAAACCAAGTGTGCTTTTTTCCTCTTTAATCCTGTGAAAGTTATTGTTACCAATAAACTTGCTGAGGCCCCGTCTACATCCTCGACATGATTAGTTGTGTTAAGTTTGTCTGGAAAAATATTGTATGAAAAAGGAAGAAAACTCAAACAATCGGGACTGGTATGCAGGTATGAAGCCTTGCCTACGTGCAGTTTCCTTCTTTGATTAAAGTTTGAGCAATCAACTAGTTGAAACATCAAATGAGAATGTTGTGTGAAAATGATATGTTATCTTGAGTTTAGGCACTCTCTCCTTCTCTCTCACCTTTCCAAACGCAGATTTGTCAACTAAGTTTAACGAGCAATCAACATCTCATTAGAAGAAGGGTTCTTTTTTTAAGATAAGGCATCCAGATCTTAACCACATACCTTGTAAATTGT

Coding sequence (CDS)

ATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCATTTAATTCTGATGCTACTACGTCTTTCATATCAATTTCGGTGTCTGAAGAAGATGGCGCTATGGCTGATGATATCAGAAACGAAGCATCTGATTCTGTCCCCCCTTCCTTTTGGGTTAAAATGGCGATGAAAATATCTAGAGCTAGATGGTTTATTTTTTTGAGAAGAGTTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCTAATCCTTTCAATTCGGGTTCGTGGATGGCGATGGAACTTGTAGCTTTGTTGTTTCAGCTAATTATCTCGGCGTTTACCCTTGCCATTTCACAGGCTGAAAAGCCAGTTTGGCCTATGAGGTTGTGGATAGGTGGTTATGATCTCGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAATGCAGAGAGATGGTAACAGTCTTTCAGATATTGAACACGAACAGCAAAGGACCAATGAATCATCAAGGTATTCACATTTGATGAACCGATGCCGCACGTCTCTCGATCTTTTCTTTGCGATATGGTTTGTAATGGGCAATCTTTGGGCCTTCGATTCTCGCTTAGCCTCGTTCCAGAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTACAGGGTATAACATTAACACGGGATCAACTGAAAAAGGAGCATCAGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCAGTTGAAGCCAACATCAACCCCCGAAGTCAACTCGACAATAGCAATACAGGACTTCTAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTACCTTGTTCCCATGTGTTTCATCTCAGGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAG

Protein sequence

MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR
Homology
[Close]
BLAST of Cucsat.G6644 vs. NCBI nr
Match: XP_004149419.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >XP_011659086.1 E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >XP_031744305.1 E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN44387.1 hypothetical protein Csa_016653 [Cucumis sativus])

HSP 1 Score: 343 bits (881), Expect = 2.25e-116
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169

[Close]
BLAST of Cucsat.G6644 vs. NCBI nr
Match: XP_008463029.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo])

HSP 1 Score: 317 bits (812), Expect = 7.32e-106
Identity = 156/169 (92.31%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           M+NSVYFVSGSSCNCG GTSLF PNSL+EED   VDVRDDNSVAL ASFWVRLAMRVSRA
Sbjct: 1   MVNSVYFVSGSSCNCGAGTSLFTPNSLVEEDGAGVDVRDDNSVALSASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMA+ELVAMV QL ITVFVLAISEAEKPIWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELVAMVVQLVITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQ+R+SQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQQRSSQASR 169

[Close]
BLAST of Cucsat.G6644 vs. NCBI nr
Match: XP_038897250.1 (E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Benincasa hispida] >XP_038897251.1 E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Benincasa hispida])

HSP 1 Score: 295 bits (754), Expect = 4.51e-97
Identity = 146/169 (86.39%), Postives = 155/169 (91.72%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINS YFVSG SCNCGG T+ FI NSL+EED    DVRDDNSVALPASFWVR+AMRVSRA
Sbjct: 1   MINSGYFVSGPSCNCGG-TASFISNSLVEEDGAGEDVRDDNSVALPASFWVRIAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRS+LGSDPFNSSSWMA+ELVAMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISETEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLM GE VGL DTEQRR+S+ASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGEHVGLPDTEQRRSSRASR 168

[Close]
BLAST of Cucsat.G6644 vs. NCBI nr
Match: XP_038897247.1 (E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida] >XP_038897249.1 E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida])

HSP 1 Score: 295 bits (754), Expect = 8.02e-97
Identity = 146/169 (86.39%), Postives = 155/169 (91.72%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINS YFVSG SCNCGG T+ FI NSL+EED    DVRDDNSVALPASFWVR+AMRVSRA
Sbjct: 19  MINSGYFVSGPSCNCGG-TASFISNSLVEEDGAGEDVRDDNSVALPASFWVRIAMRVSRA 78

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRS+LGSDPFNSSSWMA+ELVAMVFQL+ITVF LAISE EKP+WP
Sbjct: 79  RWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISETEKPVWP 138

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLM GE VGL DTEQRR+S+ASR
Sbjct: 139 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGEHVGLPDTEQRRSSRASR 186

[Close]
BLAST of Cucsat.G6644 vs. NCBI nr
Match: XP_023534961.1 (E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo] >XP_023534962.1 E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286 bits (733), Expect = 7.13e-94
Identity = 141/169 (83.43%), Postives = 153/169 (90.53%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINS YF+SG SCN  G T+ FI NSL+EED    DVRDDNSV+LPASFWVR+AMRVSRA
Sbjct: 1   MINSGYFISGPSCNYNG-TASFISNSLVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRS+LGSDPFNSSSWMA+EL+AMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWH+YLM GERVGL D EQRR+SQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHVYLMRGERVGLPDIEQRRSSQASR 168

[Close]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match: A0A0A0K7S5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278220 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 1.09e-116
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169

[Close]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match: A0A1S3CIP5 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC103501270 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 3.54e-106
Identity = 156/169 (92.31%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           M+NSVYFVSGSSCNCG GTSLF PNSL+EED   VDVRDDNSVAL ASFWVRLAMRVSRA
Sbjct: 1   MVNSVYFVSGSSCNCGAGTSLFTPNSLVEEDGAGVDVRDDNSVALSASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMA+ELVAMV QL ITVFVLAISEAEKPIWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELVAMVVQLVITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQ+R+SQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQQRSSQASR 169

[Close]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match: A0A6J1IFQ4 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111476537 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 1.13e-92
Identity = 139/169 (82.25%), Postives = 152/169 (89.94%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINS YF+SG SCN  G T+ FI NSL+EE+    DVRDDNSV+LPASFWVR+AMRVSRA
Sbjct: 1   MINSGYFISGPSCNYNG-TASFISNSLVEEEGAGADVRDDNSVSLPASFWVRVAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRS+LGSDPFNSSSWMA+EL+AMV QL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELIAMVLQLAITVFFLAISETEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGCILSLLLLYGRYWH+YLM GERVGL D EQRR+SQASR
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHVYLMRGERVGLPDIEQRRSSQASR 168

[Close]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match: A0A6J1CFQ6 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111010403 PE=4 SV=1)

HSP 1 Score: 275 bits (703), Expect = 1.18e-89
Identity = 137/169 (81.07%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MI+S YF+SG  CNCGG T+ FI NSL EED     VRDDNSVALPASFWVR AMRVSRA
Sbjct: 1   MISSGYFISGPLCNCGG-TASFISNSLAEEDGAAAVVRDDNSVALPASFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWF+FLRRVFHYQNGSR++LGSDPFNSSSWMA+ELVAMVFQL+IT F LAISEAEKP+WP
Sbjct: 61  RWFVFLRRVFHYQNGSRTDLGSDPFNSSSWMAMELVAMVFQLAITFFFLAISEAEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGC LSLLLLYGR+ HLY M G+RV LSDTEQRR+SQASR
Sbjct: 121 MRLWIVGYDLGCALSLLLLYGRFSHLYPMRGDRVSLSDTEQRRSSQASR 168

[Close]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match: A0A6J1F7G5 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC111442797 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 1.87e-88
Identity = 136/169 (80.47%), Postives = 148/169 (87.57%), Query Frame = 0 

Query: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
           MINS YF+SG  CN  G T+ FI N  +EED    DVRDDNSV+LPASFWVR+AMRVSRA
Sbjct: 1   MINSGYFISGPPCNYNG-TASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMA+EL+AMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASR 169
           MRLWIVGYDLGC+LSLLLLYGRYWH+YLM   RVGL D EQRR+SQASR
Sbjct: 121 MRLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGLPDIEQRRSSQASR 166

[Close]
BLAST of Cucsat.G6644 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-42
Identity = 77/118 (65.25%), Postives = 99/118 (83.90%), Query Frame = 0 

Query: 46  PASFWVRLAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSIT 105
           P+SF++RLAM+VSRARWFIFLRRVFHYQNGSRS+LGS+PFNSS+WM  EL+A++ QL++ 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 106 VFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRR 164
            F LAIS+ E+PIWP+RLWI GYD+GC+L+L+LLYGRY  L +  G    L D EQ++
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQ 164

[Close]
BLAST of Cucsat.G6644 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-42
Identity = 77/118 (65.25%), Postives = 99/118 (83.90%), Query Frame = 0 

Query: 46  PASFWVRLAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSIT 105
           P+SF++RLAM+VSRARWFIFLRRVFHYQNGSRS+LGS+PFNSS+WM  EL+A++ QL++ 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 106 VFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRR 164
            F LAIS+ E+PIWP+RLWI GYD+GC+L+L+LLYGRY  L +  G    L D EQ++
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQ 164

[Close]
BLAST of Cucsat.G6644 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 73/133 (54.89%), Postives = 99/133 (74.44%), Query Frame = 0 

Query: 39  DDNSVALP-----ASFWVRLAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAV 98
           DDN+   P     +SF++RLAMRVSRARWFIFLRRVFHYQN SRS+LG++PFNS +WM  
Sbjct: 31  DDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVS 90

Query: 99  ELVAMVFQLSITVFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMHGER 158
           EL+A++ Q+++    LA+S+ E+P+WPMRLWI GY++GC+L+L+LLYGRY      H   
Sbjct: 91  ELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENA 150

Query: 159 VGLSDTEQRRTSQ 167
               D EQ++ S+
Sbjct: 151 FSFGDIEQQQRSR 163

[Close]
BLAST of Cucsat.G6644 vs. TAIR 10
Match: AT4G26580.2 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 73/133 (54.89%), Postives = 99/133 (74.44%), Query Frame = 0 

Query: 39  DDNSVALP-----ASFWVRLAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAV 98
           DDN+   P     +SF++RLAMRVSRARWFIFLRRVFHYQN SRS+LG++PFNS +WM  
Sbjct: 31  DDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVS 90

Query: 99  ELVAMVFQLSITVFVLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMHGER 158
           EL+A++ Q+++    LA+S+ E+P+WPMRLWI GY++GC+L+L+LLYGRY      H   
Sbjct: 91  ELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENA 150

Query: 159 VGLSDTEQRRTSQ 167
               D EQ++ S+
Sbjct: 151 FSFGDIEQQQRSR 163

[Close]
BLAST of Cucsat.G6644 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-10
Identity = 39/115 (33.91%), Postives = 58/115 (50.43%), Query Frame = 0 

Query: 74  NGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWPMRLWIVGYDLGCI 133
           NG R+     P NS  W++VELV  V Q+   + V+ +++ E P  P+  W++GY  GC+
Sbjct: 92  NGRRTR---SPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 151

Query: 134 LSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRYSFTCYFLYIRVVNAADRE 189
            +L +LY R+       G+     D+ QR TS       T Y   + V  AAD E
Sbjct: 152 ATLPILYWRFRTYNRATGQ-----DSSQRATSSQGNSESTPY-TAVSVAQAADEE 197

The following BLAST results are available for this feature:
BLAST of Cucsat.G6644 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G6644 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149419.12.25e-116100.00E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >XP_011659086.1 E3 ubiqu... [more]
XP_008463029.17.32e-10692.31PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo][more]
XP_038897250.14.51e-9786.39E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Benincasa hispida] >XP_03... [more]
XP_038897247.18.02e-9786.39E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida] >XP_03... [more]
XP_023534961.17.13e-9483.43E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo] >XP_0235... [more]
BLAST of Cucsat.G6644 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7S51.09e-116100.00RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278220 P... [more]
A0A1S3CIP53.54e-10692.31E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC1035012... [more]
A0A6J1IFQ41.13e-9282.25E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1CFQ61.18e-8981.07E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1F7G51.87e-8880.47E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of Cucsat.G6644 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55970.13.4e-4265.25RING/U-box superfamily protein [more]
AT5G55970.23.4e-4265.25RING/U-box superfamily protein [more]
AT4G26580.12.3e-3854.89RING/U-box superfamily protein [more]
AT4G26580.22.3e-3854.89RING/U-box superfamily protein [more]
AT1G80400.12.6e-1033.91RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 269..309
e-value: 6.5E-7
score: 39.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 268..310
e-value: 8.4E-13
score: 48.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 269..310
score: 12.533537
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 217..314
e-value: 3.8E-20
score: 73.4
NoneNo IPR availablePANTHERPTHR46225C3H4 TYPE ZINC FINGER PROTEINcoord: 6..314
NoneNo IPR availablePANTHERPTHR46225:SF1RING/U-BOX SUPERFAMILY PROTEINcoord: 6..314
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 262..313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G6644.T1Cucsat.G6644.T1mRNA
Cucsat.G6644.T12Cucsat.G6644.T12mRNA
Cucsat.G6644.T6Cucsat.G6644.T6mRNA
Cucsat.G6644.T9Cucsat.G6644.T9mRNA
Cucsat.G6644.T10Cucsat.G6644.T10mRNA
Cucsat.G6644.T4Cucsat.G6644.T4mRNA
Cucsat.G6644.T13Cucsat.G6644.T13mRNA
Cucsat.G6644.T2Cucsat.G6644.T2mRNA
Cucsat.G6644.T11Cucsat.G6644.T11mRNA
Cucsat.G6644.T7Cucsat.G6644.T7mRNA
Cucsat.G6644.T3Cucsat.G6644.T3mRNA
Cucsat.G6644.T8Cucsat.G6644.T8mRNA
Cucsat.G6644.T5Cucsat.G6644.T5mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding