Cucsat.G6448 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6448
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DUF150 domain-containing protein
Location	ctg1449: 920975 .. 921735 (-)
RNA-Seq Expression	Cucsat.G6448
Synteny	Cucsat.G6448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGGAGAGGGAAAGAATGGATAAAAAACAAACCACCTTTTGTGATTATGAAAAATGGAAAGGAGAGAAATAAAAAATTAATGAAAGAAATGTTTTGGATGAGTTTTGTCAATTCAATGAGCGAAAGAAAGAAGAAAAAAAAACCATCGGATTGCAACCACCCACCGCCATAGCAATTGCAATACTGTGTTGTGGGACTACCGACTCGTGAGCTTCATCATCGTTTTTCCCTCCACTTTTACTACCCTTTACCATTCATTCGCTTTTTCTCGTACCCTTTTGTTTCTTCTTCTAACGTCCATTAACGGATTTCAAGTCCCAACAGCAGGAATGCTCTTGATTACGGCTCCTAATTCCGCACTCTCTGCACTCTCCAGTTCTCTACCAATCCTTCCACACATTCTTTTCCGATGCTCTTCAATCTCCCCCGCTAATCTTCCTTTCCCATTTCTCGATCATCGATTTCCTTCTACGTCGAACAATTCCCTATTACTTCGTGCCAGAAAGAGAAACTCAGAATCACAGCCGGTTCTCAAACAAAACATCGTCCAGGAAGTGTCCGAGGACGAAGAAGATGACGTCCTTTTCGATGAATTTGAACAAGGTAAAACCCATTAACAAAAACCCTCTCTCTGTGTATCCATTTAATTTTATCCCTTAAATATAGTTAGTCTAGACTGATTAACGGGACACGTTCTTGATTCCGTAGATGAGATAATGGAAGACGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTCTATGTAAGATTTTCGCCTCTAAATATGGAGATATTCAGCTGAAAATTTTAACTCAAATCTTGAAGTTGATGATTAATTTTGTTTGAAGTTAGGGGATGGTGGGGAAGGGGGTGGTATTTCCCTTGCTGGGACTTGGTGGGATAAACAAGCACTCGCTATAGCTGAAGAGGTTATTCTTTCATTTCATGGTGATTTGAAAATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGGATTGAAAAGCTTTCTACCAAGTAAGTTTGCAATCTCTGTAGTTTTATGTGTTTGTTTCGTATCTTTCTTTTAGAAAATCAAGGAGAAATGCACTGTACATTTTCTAAAGCATATTAGACTGAGATTTGGTTTTCTTGCGAGATGACAATTTCTTATTGCCTGATTCATGAGAATGAAAGGCCCTCTTCAAGCTTCTCCTGTCTCAATCTGTCTCCTCTGAAAGGATTGTTTGAGTGGTCTTGATATTAGGAAATATTAGGATTCTGACCCTACATTTCACTTGCAAATTAAGATAGTTCACACCAGGACCATAGATTTAAGACTGGTTTGTAATGATTCCCTACATGCTTAAAAACATTTGTTCTGCACTTCACAATACTTTTTAAAATATTTTGAAATTCATTCCAGATGGCCTTTATACTAGTTCATCCACTTCGATTGAGTCAGATATGAATTCTACTCATGATCAAGTGCAAATGGAAATGCTCATATTCTACTCATGTTCAAGTCCCAACCTACTCTCCTCTAGAATGAATCTTTGCGTGATGTTGATATTAGGAAATATTAGAATTACTAGCCCTACAACTCGCAAATTAAGGAAAATGGTTGACACTAGAGCCATAGTTTTAGTACTTGTTTGGAATGATTTCCTAAGTGCTTAAATACACTTTTTAAACATTCGGAGAGTCATTCTAAGTAGACTCTTATACTAGTTTACCCCACTTTGATTGAGTTAGATCCAATATTCTACTCATGTTATAAGTTACACAACAATGGATGGAAGGATAACACCAGCAGTTACTAGATAAGTTTTCTCACCGTTTTTCTCTCTGAAAATAGGTTTGATAATTCTCCTTTTCTTGTATGGGCCCCTCATCCAATTTCTTTTTTTTTTTTGGAAAAAAAGGATAAGTAAAACTTAATTAGTATGTAACATCTTACTTGAACATGATCTATTCTATGGTTGTACAACCATGCTTTTGAAACCATAATGAATTGGCCTAGTGTTAAAAATGGAGACATGGTCTTAATAACTAATTAAGAGGTAATGGGTTCAATCCATGGTGGTCACCTACATAGGAACTAATTTCTTACAAGTCTTCTTGACACCAAATGTTGTAGAGTCAGACGAGTTGTCCTGTGAGATTAGTCGAGGTGTGCATAAGCTGACTCGGACACTTACGGATAGATAAAAAAAAACAATCGTGCCCTTGAATTCCGAGGCTTAATTAGTATGTTGCTCAAGCCATGTTGCCCCATTTTGGAAATCCTGTCTTGCTTCCTGTGCTGCTGTGCCTACCTCCATTGATAGATGCTCTCATTTAGCATTGAAATCAGGAATTAAATCTTATGCATTACAGCGTCCACATGTCTTTAAAGTTTAACCAATATTTTGATGAGCTTGGTTCAGGTCCCACAACTTGGCAGTTCTAATTATCTTTTAGGTTGGAAATGAAGATGCCTTTTGCTTTCATGTCAATCAAGAGCCATTACCCTTTGGTTTCGAGTTTTTCCTTCTGATATTAGTATTCTCACTGAACCCTTTCACCACACAACTCAAAGCAAACTTGGATTTTTTCAAACTCTAACTGTCACTCTAATCTAAAGGATTTCCAGATACTTGGGACGTTACAAGTTGAATTCCAGTTTAAGGATATGAAAATGTGTTACACTTTAGATGTTTTCCGAAGTTTACTACCAGTGTATTTGTTCTTGCTTAGACTAAGGATCATTCCTGGGTTCTAATTCCCAACAATGCTCCTCAGATCAGGTTCCCCCAATATGGAAGATATTGAGGCTTTTTCTACAACATATCGAGCAAGATTGGATGACGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTATCCTTCATTTCCCTGTTCTAATTTCCTCATTCTTTTTTTTCTCTCATGCAATCTATCTTTAGCTTCTGAATGAAATTTTTTTCACTTCCATTATTCATATTAGTTTTCTAATTGACAAGAGCAAAAAAGAATTGCTTTCTTAGAATTACTCTGTTAGCTTTTGAGTCTAAATGGGTTTTAATCCTTCCTACATTATAAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGATGAGCTGGATCGGTTCAAAGAGAGGGCAATGTATGTGAAATACACAAATGAGGTAGTTACAGCCAGTTCATCCTCCGAGAGTGATGGTGTTTTCAAGCTTGTGTCGTTCGACATAGAAGCAAAGTGCTGCACTTGGGGTATAGCAGACGTGAAGATAAATAGAGAGAAAGCTGGAAAAGGAAGACCTCTTAGCAAAAAGCAAAGAGAGTGGCGTTTAGAGACTCCATTTGATTCATTACGGTTGGTTAGGCTTTATTCTGATTGCTGATAATGAAATCAAATTTTGGTGGGAATTCAGCCCCTTGATGAATCCAAGTTGTATAGTAAATCCACTTCCGTTGATTCTAAGATTGAAAATTTGTTGTTGATCAGGTTTTAGAACAAGAAAGAGTTCCCTTCGACTCAATTTTGGTAGTCTCTAGCTCACGCTTTGATCAAGAAGCTTAGCCTCAGTATATGAGTTTACCAACTTAAGTTTGTTAATCTCATAGAGAATTAATTTATGTTCTACAGACTCTGACGTTTGGAATCCATCTTTTATGGCATCATTTTTATGTGTGAGCATAACATAACGTTGGGGTTTGGAATTGATTTACAAGTGGTTTTAGAAAACGGAGCAATAAAGTACTTTGTGAGGAAATACTTTAGGAATTTTGAGAGTTTGTCAAGGCCGTGTGTTTAGATTGTAAAGCTTTATCTGGGTGTTTTAGTTAATGTTTAGGTGGTGTGATGTTAATGGCTTTATTAATAGTGTATTTGGTCGATACATTTGGAATTTGTACTGAATAATAGGTAATTTGTATATCAGTTATTTAATTATAAAATAATGTTTTTTATGACTTTAT

Coding sequence (CDS)

ATGCTCCTCAGATCAGGTTCCCCCAATATGGAAGATATTGAGGCTTTTTCTACAACATATCGAGCAAGATTGGATGACGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGATGAGCTGGATCGGTTCAAAGAGAGGGCAATGTATGTGAAATACACAAATGAGGTAGTTACAGCCAGTTCATCCTCCGAGAGTGATGGTGTTTTCAAGCTTGTGTCGTTCGACATAGAAGCAAAGTGCTGCACTTGGGGTATAGCAGACGTGAAGATAAATAGAGAGAAAGCTGGAAAAGGAAGACCTCTTAGCAAAAAGCAAAGAGAGTGGCGTTTAGAGACTCCATTTGATTCATTACGGTTGGTTAGGCTTTATTCTGATTGCTGA

Protein sequence

MLLRSGSPNMEDIEAFSTTYRARLDDAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNEVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC

Homology

[Close]

BLAST of Cucsat.G6448 vs. NCBI nr
Match: XP_004148816.1 (uncharacterized protein LOC101204078 [Cucumis sativus] >KGN47483.1 hypothetical protein Csa_019009 [Cucumis sativus])

HSP 1 Score: 213 bits (542), Expect = 2.39e-66
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR
Sbjct: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYV 116
           NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY+
Sbjct: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYL 116

[Close]

BLAST of Cucsat.G6448 vs. NCBI nr
Match: XP_008441560.1 (PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo] >KAA0058895.1 DUF150 domain-containing protein [Cucumis melo var. makuwa] >TYK23728.1 DUF150 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (460), Expect = 5.59e-54
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           ML ITAPNSALSA+S+  P LPH +FR SSISP NLPFPFLDHRFPSTSNNSLLL ARKR
Sbjct: 1   MLFITAPNSALSAVSTP-PSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY 115
           NSESQPVLK NIVQEVSEDEEDDVL DEFE+DEIMEDDGEDYFEEEYMEDNAEVY
Sbjct: 61  NSESQPVLKPNIVQEVSEDEEDDVLVDEFEEDEIMEDDGEDYFEEEYMEDNAEVY 114

[Close]

BLAST of Cucsat.G6448 vs. NCBI nr
Match: XP_008441558.1 (PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo])

HSP 1 Score: 174 bits (442), Expect = 3.46e-51
Identity = 101/122 (82.79%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           ML ITAPNSALSA+S+  P LPH +FR SSISP NLPFPFLDHRFPSTSNNSLLL ARKR
Sbjct: 1   MLFITAPNSALSAVSTP-PSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQ-------DEIMEDDGEDYFEEEYMEDNAE 115
           NSESQPVLK NIVQEVSEDEEDDVL DEFE+       DEIMEDDGEDYFEEEYMEDNAE
Sbjct: 61  NSESQPVLKPNIVQEVSEDEEDDVLVDEFEEGHVLDSVDEIMEDDGEDYFEEEYMEDNAE 120

[Close]

BLAST of Cucsat.G6448 vs. NCBI nr
Match: XP_038884405.1 (uncharacterized protein LOC120075260 [Benincasa hispida])

HSP 1 Score: 160 bits (406), Expect = 7.41e-46
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           M+LIT  NS LSA+S+SL ILPH  FR SSISP NLPFPF++HR PSTSNN LLL ARKR
Sbjct: 1   MVLITTRNSRLSAVSTSL-ILPHSGFRWSSISPRNLPFPFVEHRLPSTSNNPLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY 115
           NSES+PVLK+NIV+EVSEDEEDDVL DE E+DEIMEDDGEDYFEE+YME NAEVY
Sbjct: 61  NSESEPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDGEDYFEEKYMEGNAEVY 114

[Close]

BLAST of Cucsat.G6448 vs. NCBI nr
Match: XP_022939573.1 (uncharacterized protein LOC111445430 isoform X3 [Cucurbita moschata])

HSP 1 Score: 147 bits (371), Expect = 1.24e-40
Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           M++IT  N  LSA+  S  ILP   FR S ISP NLPFPF+ HRFPSTSNN LLL ARK+
Sbjct: 1   MVMITVRNFRLSAVPIS-SILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKK 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYV 116
           NSES+PV+K+NIV+EVSEDEEDD L DE E DEIM+DDGEDYFEEE+MEDNAEVYV
Sbjct: 61  NSESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYV 115

[Close]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL
Match: A0A0A0KDA0 (DUF150 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338150 PE=3 SV=1)

HSP 1 Score: 213 bits (542), Expect = 1.16e-66
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR
Sbjct: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYV 116
           NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY+
Sbjct: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYL 116

[Close]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL
Match: A0A5A7UZ84 (DUF150 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00410 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 2.71e-54
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           ML ITAPNSALSA+S+  P LPH +FR SSISP NLPFPFLDHRFPSTSNNSLLL ARKR
Sbjct: 1   MLFITAPNSALSAVSTP-PSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY 115
           NSESQPVLK NIVQEVSEDEEDDVL DEFE+DEIMEDDGEDYFEEEYMEDNAEVY
Sbjct: 61  NSESQPVLKPNIVQEVSEDEEDDVLVDEFEEDEIMEDDGEDYFEEEYMEDNAEVY 114

[Close]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL
Match: A0A1S3B4D1 (uncharacterized protein LOC103485652 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485652 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 2.71e-54
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           ML ITAPNSALSA+S+  P LPH +FR SSISP NLPFPFLDHRFPSTSNNSLLL ARKR
Sbjct: 1   MLFITAPNSALSAVSTP-PSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVY 115
           NSESQPVLK NIVQEVSEDEEDDVL DEFE+DEIMEDDGEDYFEEEYMEDNAEVY
Sbjct: 61  NSESQPVLKPNIVQEVSEDEEDDVLVDEFEEDEIMEDDGEDYFEEEYMEDNAEVY 114

[Close]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL
Match: A0A1S3B3P3 (uncharacterized protein LOC103485652 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485652 PE=3 SV=1)

HSP 1 Score: 174 bits (442), Expect = 1.67e-51
Identity = 101/122 (82.79%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           ML ITAPNSALSA+S+  P LPH +FR SSISP NLPFPFLDHRFPSTSNNSLLL ARKR
Sbjct: 1   MLFITAPNSALSAVSTP-PSLPHSVFRWSSISPTNLPFPFLDHRFPSTSNNSLLLHARKR 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQ-------DEIMEDDGEDYFEEEYMEDNAE 115
           NSESQPVLK NIVQEVSEDEEDDVL DEFE+       DEIMEDDGEDYFEEEYMEDNAE
Sbjct: 61  NSESQPVLKPNIVQEVSEDEEDDVLVDEFEEGHVLDSVDEIMEDDGEDYFEEEYMEDNAE 120

[Close]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL
Match: A0A6J1FM02 (uncharacterized protein LOC111445430 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445430 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 6.02e-41
Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MLLITAPNSALSALSSSLPILPHILFRCSSISPANLPFPFLDHRFPSTSNNSLLLRARKR 60
           M++IT  N  LSA+  S  ILP   FR S ISP NLPFPF+ HRFPSTSNN LLL ARK+
Sbjct: 1   MVMITVRNFRLSAVPIS-SILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKK 60

Query: 61  NSESQPVLKQNIVQEVSEDEEDDVLFDEFEQDEIMEDDGEDYFEEEYMEDNAEVYV 116
           NSES+PV+K+NIV+EVSEDEEDD L DE E DEIM+DDGEDYFEEE+MEDNAEVYV
Sbjct: 61  NSESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYV 115

The following BLAST results are available for this feature:

BLAST of Cucsat.G6448 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G6448 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148816.1	2.39e-66	99.14	uncharacterized protein LOC101204078 [Cucumis sativus] >KGN47483.1 hypothetical ...	[more]
XP_008441560.1	5.59e-54	87.83	PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008441558.1	3.46e-51	82.79	PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo]	[more]
XP_038884405.1	7.41e-46	79.13	uncharacterized protein LOC120075260 [Benincasa hispida]	[more]
XP_022939573.1	1.24e-40	72.41	uncharacterized protein LOC111445430 isoform X3 [Cucurbita moschata]	[more]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDA0	1.16e-66	99.14	DUF150 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338150 PE=3...	[more]
A0A5A7UZ84	2.71e-54	87.83	DUF150 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B4D1	2.71e-54	87.83	uncharacterized protein LOC103485652 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B3P3	1.67e-51	82.79	uncharacterized protein LOC103485652 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FM02	6.02e-41	72.41	uncharacterized protein LOC111445430 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cucsat.G6448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028989	Ribosome maturation factor RimP, N-terminal	PFAM	PF02576	DUF150	coord: 156..217 e-value: 1.5E-6 score: 28.5
None	No IPR available	PANTHER	PTHR34544	OSJNBA0006B20.18 PROTEIN	coord: 29..312
None	No IPR available	PANTHER	PTHR34544:SF1	OSJNBA0006B20.18 PROTEIN	coord: 29..312
IPR003728	Ribosome maturation factor RimP	HAMAP	MF_01077	RimP	coord: 134..312 score: 11.23027
IPR035956	RimP, N-terminal domain superfamily	SUPERFAMILY	75420	YhbC-like, N-terminal domain	coord: 155..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6448.T2	Cucsat.G6448.T2	mRNA
Cucsat.G6448.T1	Cucsat.G6448.T1	mRNA
Cucsat.G6448.T3	Cucsat.G6448.T3	mRNA
Cucsat.G6448.T4	Cucsat.G6448.T4	mRNA
Cucsat.G6448.T5	Cucsat.G6448.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis
cellular_component	GO:0005737	cytoplasm