Cucsat.G5744 (gene) Cucumber (B10) v3

Overview
NameCucsat.G5744
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProgrammed cell death protein 2-like
Locationctg1402: 1686508 .. 1693749 (+)
RNA-Seq ExpressionCucsat.G5744
SyntenyCucsat.G5744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAACTAATGAATAATATACAATAAACATCTTGATCTAGAAGTAGTTAACCGTGACCACAAAACCACAAAATCAGCACCCTCGTGAGGAAGCTTCAGATTCATATACCATAGACACTTCATGGAAATGCGTGTTCCGTCGTTCACCGTTGCCTCACCTATGTTCATTGGAAGAGAGATTTACAGTGAGTTGCGAAGAAAAACCAACAAGAAGAGATTTACATTGTTCGACTACCCCAAGAAAGTGAATAGGAAAAGGCAACGTACACTGGAGTAGAGGAGAAGAAATGCAACTTACATCGTGGCCTCACTCGAGTAGAAGAGAATGTGACACCAGAGTAGAGGAAAAGAAATGAAGCGAGAAAGTTCAATCTTTCTTTCACTCTGCGAGTAGATGTCTCAATCTATCCTAAAACTCAATGTTTTTAAATTCAATCATAAAAATTATTTATTTCTCTATTTTTTTTTTTTGCGATTTCTCAAAAATGTTAGGGTATATATATATATATATATATTTTGCCCCTTTTCCTCTGTTTTTTGTTCTCTAAATCCTTAAACCCTATCTCACCGGGCCCCTCCCTCCCGTTGCCAGCCACTTCCCCCTGCTCCGCCGTACGCCGCCCCTACCTGTCTCAGTGGCGCTGTATTATCAGCTGCCGCAGTCTAATCACTCCGATAAATTCCCTGCCGCTCCCTCTCAAACTTTCTCACCTCTCCCACTCAGAATTATTTATCTTTATTGTTTGTCTCAGAAACACAGTGCAATCCCTAACCTGCCCCGTTGGTGAGATAGCACTGCCGCCTCTCATTTTTAAGATCCCCAAGGTTTTGATTTTTGATTGTGTTTTGTTGTTTTTTTGTTGATTGTTCTGTGCGTCCCCGAAGAAAAAAAAATGAAGAAGCAAAATTTTTCGGTTGATATATTCTTCAACCAATGTTCCACTAGTCTACACGAAAACGTAAAATCAAGAGAAGAAGTTACAGATTCAATTCAAAGGATGAACAAAGCAATTGGTTGGCTATAAAAAATAATCGAAAAAGCTGTATTTGAAAAAGATTGAGTTACCAGTTGACAGAAAACAGCAAAATACAATGGACAAACATTTTGAAAAAAGCTGGAGTTTGATTGAATGGCGTTGAATTTGCTTGAGTATAGAAGAAACTATTGAGCCAGATAAAGTTCAAAATATCTTGCATGTGCTATGCCTATGATCTAAAGCATTTAAAAGTTAAATTCTGATTAGTGTATTTGCCTTCTGTTCTATCCTTACAATTAAAAAAATGAGAGTTTATATTTTAGATGAGTTACAGTCTATTTAAATAATTCAAAAAATTTCATTTCCGATTGTTTAGCAGAGTAAGTTGATGGGTGCAGTCATTCTCGGCTTGCCAGGTCCTTGGGCTGACGATAATCTCGAACTTTCTGATCATTATACTACAAAAGTTGGCGGGATTCCTGTAAGTTGCTAGTTAGATGATATCCTCGAGTATGGATATATTTTTCTTTTTAATGGTAGTTGCAAGGTACATTTGATTATTGCTTGAAACAGGACTTACCTTTTCAAAATGTCAACCACAGTCTGTTAGACTGTTCTCAGTGTGGAAGTAAATTATGTCTTGTTTTACAGGTGATTTTATTTTATGTTTTAGAAGTTTGTAACTTTTTCGCCTCTTACAGTTCCTCTTCTTCCATTCTATCTAATTTTTTTTAAATAGTTATACTTAAGGTAGTTGTGCTTTCTTGAAGATTTATGCTCCAGTTTCAATAGATAGAACAAACATAGATGAGCGCTTTCTCCTTGTATTTGGTTGTCTAACTCCAGAATGTGGGAGCAGTTCCCTTGGGTTAGTATTAATTTTCCTCCTATCTCTTTGGCTGATGGAATGCCAGTTATTATTTGGTTTAACATTGAACTTTGGCTGTCCTCACTTGGGGTGTGCAGTTGGCGTGTTCTTCGTGTTCAAAAATCATGTGACAAGGAGTTCTCCAAAGTTTCTCAAGAAATTGGTCCCTTGACAACATCGACTTCAGCTGCAAAGACTAACTGGTGGGAGCAACTGGATGAAGAAAGCGATGAAGAAATGGATTTGGAGGAGCTGCAAAAGGCATTTTCAGATGTTGCAACTAAAGTTTCTCATGCCAAGGAAACTCCGAGTAAATCACATTCTAAGACTGTCACAAAGAGCTTAACTTCCAGACCAACAAGAGTTGTCGATGTGAAAACACCAGGTATGGACTATCCAATTTTTTTTTCTTTTTTTTTTTTTTTTGTAGAAAACAGAAAATATCAGTAACTAGTGATTTTAATTAGGTGTAACAAAGGGAAGAGATTATTTGATATTAAGGTCAAGGAAGTTACAGTGCCTTGATAAAAAAGAACTGAAAAGACGTTCAACATAGATTTCAGGGAAACACACAATCCTGTTTACTTTTTTCTTGAGTTATCTCTGGAATTGGGAGCAATGCCTTATCTACGAGAATGGGAGGTCCATTTGAAAATTCAAGTTTCCCCAACTATGATGATGTTATATGAAGTCCCAAGTGTTACCGTCATTGTTCCAGATGTCAGCAATGCTTCATGTTTTGAGTTAGCTATGGAGGAGAGGAACTAAATTTGCCGAGAAAAGTCAGATGTACAGCAGTTCTCCCACTCTGACTTCAAGAAAGTCCAACTGTTACCTGTAAAGAACAAAGGGGACTCTTGGAGATTAACAAAATCTTATTTTGGACTAGAATAAAGAATTATTCCATATAAATACACTTTTTTTTTCTGATTACAATTTACACTATGCTGCAAAGTTGGCTTCTGCAGTAAAGGTCAGATCCATTAGAGCAAAGAGCATTTGGTCTTTATATTTTCCATTCTTAACCTCCAAAACAAATAGGTTTGAACGTGGTTCACCAACCAATTAATAAGGTAGGAGGTTCCTGCAGTAGCAACATAACCCATTCAAATAAAGTATCTGAAAATATGCACTGTTGTTCGCTTCTTACTTCACTATTTATGTGTTTCAGCTATGGATTTAGAAACACTTTTAATGGTGTAGTACATCTGTTTGTTTGCAGTGGTACCATGCTTTTATATCTATACTGAAGATGAACCATCGTCAAAGGATATTTCTATGTGTTCCAATTATGCATCACTCTCTTTAAAGGAGAATCAAAGTGATGAGGAGGATTCAATACAAGAAGAAAAGTGGTCAGAAGAAGGTTACGAACATGACAAGGCTCTGACTGCTGACAGAACTTACCTGAAGTTCAAGAAAAAATTGGATGCATATCCAGAACAATGTTTGAGGTATTTTGTTGTGGTAATATACAACTTTTTAAATTGTGATTATCTGCTTATCATCTTACTATTATACTTCTGTTTACCATGGATTGACCTATGGGGTGTTTGGCAACTTTGAGTAATTTGGGAGAGTTGGGTTGGGTGGGTAAAAAAAAACTAACATCCTATTTGGTTCACCAATAATTAAGGAGGTTTACTACCTTGTTATTCGTATCAACTCAAATACCTAAATACTCACATTTCTCACATCGTTATTCTTATCAACTCCCCCAATAGCTTTCCTATAATTATTAACTCAACTCATCTCTTTGTTTTTATCGCTAACCAAACACCCTTAGTGGGTAGGAGGCTAGGAGTTGTCATGTTTAAGAGATAGGGCTTCAAATCTCTTTTTATCTAGGATATTAAATACAACACAAATCCTCCTTCTAGGATAATTGCAATGGGTAGCGCTTTTGGAGCCAATAATTAACGTGGTGTTTAGTGACTCATAATGGAATGAGTTTGTATTGTAATGTAATTCAAAACCCATGTTTAGATTGAGTGTTTTGGGTCTGAATTGTGTAATGCAAAGCTCATTACAGTTTTAAATCCAATCCTCCTTCTCACTATTTTCACATGTCACAATCTCATATAGGGGTGTTAAAAAAGCTTGACAACTCGAACTACCCAACACAAATTGTAAGGGTTGGATTGGGTTGGGTTGAATTTTTTATGTTTTTTTTCAGGTTGCATTTTTTAAAATTCAGGTTGATCCAACCTAACTCGAATTTCTAATATTATTAAAATGTATATATTATAACTTATAAATATTATAATTTATACATCTTGTTATGAAGTTTGTAATAGATATGTTGGATTTTGATATTTAACTTTTGAGTTTTATGAAAATTTAGTTATTGATATATTTTGTAGACGAATTTAAGTACTTTAAGTTATAAAAATATAAATAAATAAATAACCTCGACAACTCAACCCAACCCAACCTGAATTTTAAGGGTTGGGTTGAAGATCCTATTTGAGGGTTATCAATTTGACAAACCAAAAAATTTGGGTTAGTGCAAAAAGAACCAAAGCCATTTACACCTCATTTTCGTTCAATCTTCGATTAGTCACACTTTCCAACAAGCATATGATTCCCATTAATCTGAATTACATTACAGCTCTCTAAACCCCTTAGGGAGTTGTGAACTCCTAGGGGCATACATTGTTAGGAGCACAACTCCCTTGGTCCCCACAGTGTTAAAAGTTGATAAAGTATAAAATTGATATTTTTTAGTGGTGGGACTATCAAACTCCTTGGTTCAAACAAGGAGTGGAGTTCACAACTCCCTACTTTCCTACTCCTACTTCCATTCTCCTCGGGCCAAACACACCCTAACTATATGACTATAACAACATTTTTTAAGAATTGCTATTTTGAACCAGGAGTGGAGTTCACAACTCCCTACTTTCCTACTCCTACTTCCATTCTCCTTGGGCCAAACACACCCTAAGTATATGACTATAACAACATTTTTAAAGAATTGCAATTATAGTAAAATATATTAGTGATAGACTCTATTGCTAGTAGACTCCTATTAGCCATATGATCTAATCATCGCTAAACTTTAAGATTTGCATCTAAATTATGCTGTATTTGCATATTATTTTGTATTGTGCTATATGGGTTAATTCTTTGAGCTTCATTGCTATATTTGCAATTGGTCCATTCTTCCAAAACCAAATACAAATAGCATATGCATATTCAAGAGGGAAGGTAGACATTTTGTGGAGTGATCGGGGGGGCTTGGGTTAGCAATAGCATATTCAAGAGGGAGGTTCCTAGTGCCTTTATACTTGGTTTATTTAGTAGTTTTTCCTTTATATTTCAATACATTCCAGATCTTAATTCTAGTTAGGTAGTATTCAAAACTTTCATTGAGTATAAAAAAAAGAGGAAAAATTACAACATCCAAAAGACTAAGTTCACCAAATGTTGTGCACTAACAAAAGGAGCTCCACTAAAAAGACAATATGACCCAAAGAATAGTTACAAACAAGCTTTCGTCACCTTTGACACTCTACCAGTCGAGCCTTAGAACCCTTTCTTGGATATTTGTTTTAGTGTGTTCTGGTGTGTCAGCCGGATCCACATTTTTTTCCAACAACGTAATATCTTGAAATGGTATAGGTTTATTGTTAAGCATTTAGGATGGATTAGGAATTAAGAGGCAAGTGATTGAGCAGGTTGAACTTCAATACTTTTTCGGGCGAATTTCATTACTTGTTTCTGAATTTTTATATGCTCCAATCTCTCAAATTTCTCTAACTGCGTCATTTCATTCAAACTGTAGGAAATGAGTGTAAAACCAATCTTAAGAGTAGGGACTAAAACTTTCTAATATTACAAGTACAGTAGAGCAATACAACATTTACTTTGAGCATATGACGTCACATATACTCTAACCTAAGTTTTTAAGCCAAACTATTTGAAAACAGTAGTGAGTACAGTTTTTGGTGCAGTTTTGGCCATTAATTTATTGACATTATTCAGTTGATCTCAACTATCAATATCTATAAAATTGTTTTCTTTTAACATTTTTCCTGTCCTATCTTCAGATACTCGTTCGGTGGGAAGCCAATTTTAGCAAGATCAGAGGACGGAGAAGCTGGAAAGTGCAAGGCATGTGGTGGATCAAGGCAGTTTGAAATGCAGCTTATGCCTCCACTGCTATATTTTCTTCAGGAAGCAGCTGATGAAAGTCAAAAACAGTTGCTGGAGACCTGGAACTGGATGACGCTTTTGGTACATACTTGTTCTGAAGTGAGTTCTCTTTTCCCTTTTGCATGTCTAATATAGGCTGAAAAAAGGTGTTTTACGTATTTAGAAAATCATTCCAAGTATTCTTAGCCCCTTTTGTACGACTTTTGAGATGGTAGAGGAGTAATACTAATATCTTTCTTTAGTGATGCATTTATCCTCGTTCACACACAACACACAACACACAACACACACCCAATACTAAAAAGTATGGGTGAACACTAAAACGACCAAACAGAAATAATTGACAAAATTTAACTGAAAATATGGTTTTTACCAAAAGGTTGGTTCGGGTTAAAATTATAAGAAAACCAATTGTTTTGGTTCAGTTCGGTTTTGGAAACTGAACTGAATTGTTTATATCATATATAAAATCGAAAATGGAACTAAACCAAACCATTTATATTTTATATTATATATATTCGATTCAGTTCGGACAAAACAAATGGTTCAGTTCGTCATATTTCTTGAAAATTTTTAGTCAGTTTGGTTTGCTACTAAACCAAACCAAACCTAACGTGAAAAACCCTGCTACAAATTGAAAACTTGCTTGGTCTTAGACATATTTGATCAACACCTCCAATATATATGATAGTTTGTTCCTACCAATTCCAATAACTCAATAGATGAGACACCAATTAGCATCTCAAAGGTCGTTGATTTGAACTCTCACCTTCACATGTTATTTTTGGTCGTCTATTGTTACTGATTTGTTCTAGTTGTGTACTGATATTGTTTCACTATTTAATTACATTCACTTTCATTTTGTTTTTTCTTTTTGTTAGAGCTGTTCGCAATCTTCTGAGAAGTCAGATGATGGGAACTGGATCATTACAGAAGAATCCACGATAGTGCAACTCGAGAAGCCCTTCAATAGCTCCCCAGAACTAGTTGGCTTCTTCTCCCTCACCCCATGATTGATTTCGGGACCGAGACATTGGATAAAGCATTCACATTAAATTTTATCTCACTGTATATCTCAAGGAAAAAATTTTGTGGTTTGTAATTTAATGTATGTTTAGTTGTCTCATAATCCACGTTGATTTGGTTGAATGATCGATTGATTGTGTTCATAGTGAGAATCTTATAATGCTATAATGCATGCTTCACGAATATGACACTTGAAACCATTTACGTGAAAATGGCAT

Coding sequence (CDS)

ATGGGTGCAGTCATTCTCGGCTTGCCAGGTCCTTGGGCTGACGATAATCTCGAACTTTCTGATCATTATACTACAAAAGTTGGCGGGATTCCTGACTTACCTTTTCAAAATGTCAACCACAGTCTGTTAGACTGTTCTCAGTGTGGAAGTAAATTATGTCTTGTTTTACAGATTTATGCTCCAGTTTCAATAGATAGAACAAACATAGATGAGCGCTTTCTCCTTGTATTTGGTTGTCTAACTCCAGAATGTGGGAGCAGTTCCCTTGGTTGGCGTGTTCTTCGTGTTCAAAAATCATGTGACAAGGAGTTCTCCAAAGTTTCTCAAGAAATTGGTCCCTTGACAACATCGACTTCAGCTGCAAAGACTAACTGGTGGGAGCAACTGGATGAAGAAAGCGATGAAGAAATGGATTTGGAGGAGCTGCAAAAGGCATTTTCAGATGTTGCAACTAAAGTTTCTCATGCCAAGGAAACTCCGAGTAAATCACATTCTAAGACTGTCACAAAGAGCTTAACTTCCAGACCAACAAGAGTTGTCGATGTGAAAACACCAGGTGTAACAAAGGGAAGAGATTATTTGATATTAAGGTCAAGGAAGTTACAGTGCCTTGATAAAAAAGAACTGAAAAGACGTTCAACATAG

Protein sequence

MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYAPVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSAAKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVVDVKTPGVTKGRDYLILRSRKLQCLDKKELKRRST
Homology
[Close]
BLAST of Cucsat.G5744 vs. NCBI nr
Match: XP_011656448.1 (programmed cell death protein 2-like [Cucumis sativus] >XP_011656449.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744123.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744124.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744125.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744126.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744127.1 programmed cell death protein 2-like [Cucumis sativus] >XP_031744128.1 programmed cell death protein 2-like [Cucumis sativus] >KGN45848.1 hypothetical protein Csa_005250 [Cucumis sativus])

HSP 1 Score: 375 bits (963), Expect = 7.95e-128
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. NCBI nr
Match: KAA0047764.1 (programmed cell death protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 351 bits (900), Expect = 1.01e-118
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. NCBI nr
Match: XP_008463106.1 (PREDICTED: programmed cell death protein 2-like [Cucumis melo] >XP_008463107.1 PREDICTED: programmed cell death protein 2-like [Cucumis melo])

HSP 1 Score: 351 bits (900), Expect = 2.95e-118
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. NCBI nr
Match: TYK02400.1 (programmed cell death protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 337 bits (863), Expect = 3.44e-114
Identity = 168/185 (90.81%), Postives = 174/185 (94.05%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGS  C  L+IYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSS-CAFLKIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTP 185
           DVKTP
Sbjct: 181 DVKTP 184

[Close]
BLAST of Cucsat.G5744 vs. NCBI nr
Match: XP_038886302.1 (programmed cell death protein 2-like [Benincasa hispida] >XP_038886303.1 programmed cell death protein 2-like [Benincasa hispida] >XP_038886304.1 programmed cell death protein 2-like [Benincasa hispida] >XP_038886305.1 programmed cell death protein 2-like [Benincasa hispida])

HSP 1 Score: 332 bits (851), Expect = 8.06e-111
Identity = 164/187 (87.70%), Postives = 174/187 (93.05%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MG VILGLPGPWADDNLELSDHYTTKVGG+PDLPFQNVN +LLDCSQCGSKLCLVLQ+YA
Sbjct: 1   MGGVILGLPGPWADDNLELSDHYTTKVGGLPDLPFQNVNPTLLDCSQCGSKLCLVLQLYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSI+ T IDER LLVFGCLTPECGSSSLGWRVLRVQKSCD+EFSK SQEI PLTTSTSA
Sbjct: 61  PVSIEGTKIDERLLLVFGCLTPECGSSSLGWRVLRVQKSCDQEFSKASQEIFPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
            KTNWWEQ+DEES+EEMDLEELQ+AFS+VATKVSHAK TPSKS+SKTVTKS T  PTRVV
Sbjct: 121 PKTNWWEQVDEESEEEMDLEELQRAFSEVATKVSHAKGTPSKSNSKTVTKSSTLSPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match: A0A0A0K8S8 (PDCD2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014680 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 3.85e-128
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match: A0A5A7TXN8 (Programmed cell death protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1059G00270 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 4.91e-119
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match: A0A1S3CIF5 (programmed cell death protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501334 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 1.43e-118
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGSKLCLVLQIYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match: A0A5D3BTF5 (Programmed cell death protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001070 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 1.67e-114
Identity = 168/185 (90.81%), Postives = 174/185 (94.05%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MGAVILGLPGPWADDNLELSD+YTTKVGGIPDL F+  NHSLLDCSQCGS  C  L+IYA
Sbjct: 1   MGAVILGLPGPWADDNLELSDYYTTKVGGIPDLAFKKFNHSLLDCSQCGSS-CAFLKIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSIDRTNIDER LLVFGCLTPECGSSSLGWRV RVQKSCDKEFSKVSQEIGPLTTSTSA
Sbjct: 61  PVSIDRTNIDERLLLVFGCLTPECGSSSLGWRVFRVQKSCDKEFSKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
           AKTNWW+QLDEESDEEMDL ELQKAFS+VATKVSHAK TPS+SHSKTVTKSLTSRPTRVV
Sbjct: 121 AKTNWWQQLDEESDEEMDLAELQKAFSEVATKVSHAKGTPSESHSKTVTKSLTSRPTRVV 180

Query: 181 DVKTP 185
           DVKTP
Sbjct: 181 DVKTP 184

[Close]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match: A0A6J1JRL2 (programmed cell death protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489166 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.60e-105
Identity = 156/187 (83.42%), Postives = 169/187 (90.37%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPDLPFQNVNHSLLDCSQCGSKLCLVLQIYA 60
           MG VILG PGPWADDNLE SDHYTTKVGG+PDLPFQNVN +LLDCSQCG+KLCLVLQIYA
Sbjct: 1   MGEVILGFPGPWADDNLEASDHYTTKVGGLPDLPFQNVNPTLLDCSQCGNKLCLVLQIYA 60

Query: 61  PVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTSTSA 120
           PVSI+RT IDER LLVFGCLTPECGSSSLGWRVLRVQK  D+EF KVSQEIGPLTTSTSA
Sbjct: 61  PVSIERTRIDERLLLVFGCLTPECGSSSLGWRVLRVQKVPDQEFLKVSQEIGPLTTSTSA 120

Query: 121 AKTNWWEQLDEESDEEMDLEELQKAFSDVATKVSHAKETPSKSHSKTVTKSLTSRPTRVV 180
            KTNWWEQLD+E+DEE+DLEEL++AFS+VAT+VSHAK TPSKSHSKTV+ SL     RVV
Sbjct: 121 PKTNWWEQLDDENDEEVDLEELERAFSEVATEVSHAKRTPSKSHSKTVSNSLNLSSARVV 180

Query: 181 DVKTPGV 187
           DVKTP V
Sbjct: 181 DVKTPVV 187

[Close]
BLAST of Cucsat.G5744 vs. TAIR 10
Match: AT5G64830.1 (programmed cell death 2 C-terminal domain-containing protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = 0 

Query: 1   MGAVILGLPGPWADDNLELSDHYTTKVGGIPD---LPFQNVNHSLLDCSQCGSKLCLVLQ 60
           M  ++LGLPG WA+D LE SDHYTTK+GG+PD   +P   +   LL+C  CGSKL LV Q
Sbjct: 1   MVGILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQ 60

Query: 61  IYAPVSIDRTNIDERFLLVFGCLTPECGSSSLGWRVLRVQKSCDKEFSKVSQEIGPLTTS 120
           +YAP+S +  +I ER L +FGCL P+CG+S   WR   +QK+  KE  K S +I  L  +
Sbjct: 61  VYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKE--KGSTKIADLPVA 120

Query: 121 -TSAAKTNWWEQLDEESDEEMDLEELQKAFSDVA------TKVSHAKETPSKSHSKTVTK 180
                + +  +  D++ DE+ D   L KA ++ +      TK   +K + + S       
Sbjct: 121 FPKTHRLDGDDDDDDDDDEDFDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKP 180

Query: 181 SLTSRPTRVVD 182
           S     TRV D
Sbjct: 181 SPLKSETRVED 189

The following BLAST results are available for this feature:
BLAST of Cucsat.G5744 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G5744 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656448.17.95e-12899.47programmed cell death protein 2-like [Cucumis sativus] >XP_011656449.1 programme... [more]
KAA0047764.11.01e-11893.05programmed cell death protein 2-like [Cucumis melo var. makuwa][more]
XP_008463106.12.95e-11893.05PREDICTED: programmed cell death protein 2-like [Cucumis melo] >XP_008463107.1 P... [more]
TYK02400.13.44e-11490.81programmed cell death protein 2-like [Cucumis melo var. makuwa][more]
XP_038886302.18.06e-11187.70programmed cell death protein 2-like [Benincasa hispida] >XP_038886303.1 program... [more]
BLAST of Cucsat.G5744 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8S83.85e-12899.47PDCD2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014680 PE=... [more]
A0A5A7TXN84.91e-11993.05Programmed cell death protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CIF51.43e-11893.05programmed cell death protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501334 PE=... [more]
A0A5D3BTF51.67e-11490.81Programmed cell death protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1JRL21.60e-10583.42programmed cell death protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489166... [more]
BLAST of Cucsat.G5744 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64830.13.1e-3139.79programmed cell death 2 C-terminal domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007320Programmed cell death protein 2, C-terminalPFAMPF04194PDCD2_Ccoord: 11..151
e-value: 6.3E-37
score: 127.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR47762OSJNBB0079B02.4 PROTEINcoord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G5744.T5Cucsat.G5744.T5mRNA
Cucsat.G5744.T2Cucsat.G5744.T2mRNA
Cucsat.G5744.T11Cucsat.G5744.T11mRNA
Cucsat.G5744.T4Cucsat.G5744.T4mRNA
Cucsat.G5744.T10Cucsat.G5744.T10mRNA
Cucsat.G5744.T3Cucsat.G5744.T3mRNA
Cucsat.G5744.T6Cucsat.G5744.T6mRNA
Cucsat.G5744.T1Cucsat.G5744.T1mRNA
Cucsat.G5744.T7Cucsat.G5744.T7mRNA
Cucsat.G5744.T13Cucsat.G5744.T13mRNA
Cucsat.G5744.T8Cucsat.G5744.T8mRNA
Cucsat.G5744.T9Cucsat.G5744.T9mRNA
Cucsat.G5744.T14Cucsat.G5744.T14mRNA
Cucsat.G5744.T12Cucsat.G5744.T12mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm