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Cucsat.G5544 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAAAGTAAAAAAATAATACATTAACACACCCAATTTGGCTCCATGAAAATCTCTCCCCCTCACTCCTTCAATCTAGCCTCTTTTTCTCCTTTCCCATTTCTCATCTACAGACCTCTCTCTCCCTCCTTCAACGTATTCAATGGCGGCTCTTCAATTCTTAGCTATTTCAACCGCCTGTTTCAGGTCTCTTTCTTCTTCACTTTTCTTCTCTATAATCATTTATATATTCAACATCGTTTGTCAGTTTTAATGATTTCTGAATTTGACCTTTCCCCTATCTCAGCAGCCTTCTTTGATTTTTCGTGATTTCATCTCGCTTTTCTTTTTTCTATCTCTGTGGCGATTCGATTTTGCTTTTGGTTACCGCTTCCTTTTTGTATCGCATTGATCTTTGAAGTTGTTCGTTGGATTATCAAGTTTGAGCTCTTCGTTGTTTTCACCTTATTTGAGGTCGTCGATGTTTTAGGTTGTAGTTCGAACCTGAGGAGGCATGGCTTCTCCGCCGATGGAGGAGCCAGGACAATTGAAGCGCGCGATGATTGACTCGACGGCTGGCGCAATTGCTGGTTGTGTATCTCGGACGGTCACGTCTCCTCTCGACGTGATTAAGATCAGGTTTCAGGTTGATTTTGGTTCCATTGGCTGCATTTGTTTGATTTCTAGGAAAAGTAGAACAGAGAAGAACGATATGTTTTAAGCAGCGAATATAGTTTGTATGTTGTTGGCTGTAAGAACGAAATTGAACTTCGTGTTTTCTTCTCCTCTTGCTGGATGAGTCCGTGGTTGTTTATGATTTCAATTGGAAATTTGAATCTGTTTCTGTTCTAAAAAATGTATAGCGTACTTTTTCTTTCTTTGATGTTGTTCGTCTCACTTCTTCTGTTCAGCGTCTTTCTGTGCCTTTTTCTTACACAGCGTGCATATGAAGATTTTGATTGTTCCAACTAAACTCTTTACGCATGGAATTTCCGTTGTAAAATAGTTTCTTTATTTAGGATAGTTGGTTTTTCATCTAATATAACTGTGGTCTATCACTAATAGTACTTAAATGTAGATCCCATTGATTGACAGCTTCTTCTTCTTTTTCTTTTCTGCATTCTTCTGTGCTTGCTACAGAGTAAAATTTCCTGTGTGACTGTCTGCTATATTACGCCAATTGTGCTCTCTTGCGCTGTAATGTATGCTTATATTCATGTTATTTTTGTAGGTTCAACTGGAGCCAACAACTTCATGGGCTTTGGTTCAAAGAAGTTTATCTGGACCATCAAAATACACTGGCATGGTCCAAGCAACAAAGGATATTTTCAAAGAGGAAGGTTTACCGGTTGGTTGTTTATGCTTGATCTTATATGTATTCTGCAATCGACATGTTATGTTGGAAATATGAAGTTTAGGAAAGATTGCCGTTACACGAGTTTGCCTATTTACATTATGTTACTCTTATTAATGCAAGAAAGATTGTATGCAATTGGAAAGATATGCGAGGATTTTTTTGTGGGTAGAGATACTTGAGGAAATTAAGTTGTTTACTTGATAACTGATAGTGGAGGAATAGGGATTGGGAATAAGGAAGAGGAGAGGTGATGTATTTGCTGATCAAATCGTCTTGAAAGCTCTTTGATGAAACCAATGTGGAACTAGGTAATTGCAAATATGGTGATTGGATGAAAATTGGTTTACAAAATAAAGATTGACTGGTAGCTAATGCAGAAAAAATCCACACAAAACAAGGATTTTTCAGAAGATTATCCAGTGTACCTTTCAAAGACATGTAATGCTCTAAGTTTGATTATAAATCTGGAGGGAAAAAAAGCTTGCCAAACCTGTACATCTGCAAGTTTCTGAGCTTAAAAGGCTTGATTCTAACCACTGCTTACTTCATTCTTGGTTTTCTTGAGACCTAATTTCTTTGTTAAATCACACTAACACTGTGTCATACTTGATTGAGTAAGGCTTTTATTTTGCATTCATTGCCTTTAATGTTTCAAATCCCTATGGCTTGTTCCTGTTCAGTTGTATCTGTGTGCTTCCTACAGCTCTATTCTTTTGACATTAGAAGTTAACACTGTGCATGTATTTTGTGACTAAAGTAACCGATATAATTTAGTATAATTTCTGAATGGTTTGACCATTCCCCCTTTCCTCGAATTTGATGAATCCTGGAAAACGTAGCATGGAATACTTTTGTTTACTTGGACTGTTTCCACTTCTATTCAACATTCTTCTGGATATACTGCGGTGTCATATATATCCCAGATTTTTTTTTTTTGTATTTTTTCCTTCTTTAATTTAAGAGTTATCTATTGCAGGGTTTTTGGCGTGGGAATGTTCCTGCTCTGCTCATGGTTATGCCATATACAGCTATACAATTTACCGTTTTACATAGACTGAAAACATATGCCGCTGGTTCCTCGAAGACAGGTACTATTTAGAATATACATCAAATAGGCAGCCTAAGCACATAAACTAGTTAAGGCATATATATCTTCACAAACTGTGTTATTTAACCCCCCCACCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCACACACACACACACACAAGGAGAGATGGTTGAAACCCTAATAATAAAAATAATAAAGAAATTAGAAAATGGAGGTGGATAGGGTTTAGTGGGGGGATAGAATTAATGGAGGAATCTAGATATGGATTGTGCTCTAATAACCATCCTAAGTCAAACCAGTCAAAGGGATAAACTATGAACTAAAGCTTTGAGGTTCAGATCATAGTGGCCATCTAGTATAATACCAGGTCCATTCAAGTTCTATGAGATAAAAATGTTGGAGGATCAAACCTTTTCCTGGCCTCTGCCTAAACTAGCCAGACATCCATAGTTATTAAATAAAATGATGAACAAATCAAATGTTTTCTCCCTTTCTCCATCCCCTCATCTTCCTTCCCAAAAATTGGAATAGAGCAACATTCATGTTTTTTAGTTTTATCATCTAATATCTAAAGAAAAGAACCCATATAACCAAACAAAAACATCGACTACCTGGTTTCATGTAAGAAAATTGATTATCATTTATGTCATTAACAAAAGAGATCATTTTAGAGTATCAAGTGAAGTTGGAAAAATACAAGTAAAAACGAAGAATCAATAAATGTATTCTCCCTTCCTCCATCCCTTGGATTCATGTTTTTTAGAATTTCAACTTCTTTTTTTCTTCTCACTGGATGCATTATTCTCAAAGTGGTTTAAAGAAAAATTTGAGCTCTCTTTTTCCAATTTCATTTGATACTCTAGAACAATCTCTCTTTTCTCAATGAGATAAATGTACTCAACTTTCTTGCCAACCAGGCAGTTGATGTTTTGTTTGGTTACATAGGTTCCTTTCTTTAGATATTAGTGCTAAACCTACTTGTGAATACTTGTTTCTGTTTTCATTTATCAATCTTGTCTATTTTTACCTGATGCAGAGGCCCACAAACAGTTGAGCCCATCTCTCTCTTATATTAGTGGGGCACTGGCGGGGTGTGCAGCAACCATTGGATCATATCCATTTGATCTTCTTCGAACTATACTGGCTTCACAAGGTGAACCGAAGGTATCAAATTTGATGAACGACTCATTTTTTCTTATGGCACAACTAGAAATTGTTTTTACCACTGGAAGAAATGCTTTTGAGAACTATGATTGTGTTTATAAAGAATCATGCTAATGTACATGGTTTTGATGGGAAAAATAATTTCACTTGTGCATACATAAAAAGAACATGATCTAACTAACTTTTTTTTTAGAACAGTTTTTCTTTCTGAAAGATCTCAAAAATATTCTTTAGCATTTCAAGCATTGAGCTGAATTGGGGATCTCTATGCTTTTTGTAATTTAAAAATCAATATATCAGTCTCCCATATGTATAATTAGACATAGACTACATTGTTTTGAAGAGAAAGGGATAAAGAAGATGGGCGTCGTCAAATGTACTCTAACAATTTTATTTGGACACCAGCTTCTTAAAATTCTTTTATTTCTATGATTCTGCCAAGGAGCATTTGAGTCTGCATTTTCAATAGTGTTTCTGTGTCAAATTAATAGTAACATGTTTGCATAAATTTGTAGATATATCCAACCATGAGGTCTGCATTTATTGATATAATCCGCACTCGAGGATTTCGAGGAATGTATGCTGGATTGTCACCTACACTTGTTGAGATTGTTCCATATGCGGGTCTACAATTTGGCACCTACGACACATTCAAGCGATGGACTTCAGCAAGTCTACTACACCATTCTTTTATTTTTTCATTTGCACGTTTTCTTTTTGGTTGCTTATCTCTCCCCTTATCTCACAGTTTCCCTCGAAATGATATTTGCAGTCATGGAACCTCCGCCACTACCCAAATTACGGACTAGGTAATACAGAAGATGACCTCTCAAGCTTCCAACTTTTTCTTTGTGGATTGGCTGCTGGGACATGTGCAAAACTTGTTTGCCATCCACTTGATGTGGTTAAGAAAAGATTCCAGGTACGCACAGTTTGCTCTCTGCTGTTGGATGAATGACTTCAAAATAGATTAAGATGATAATAATAATAGTGTAATGGGGTTTTCAAATGATTCATTACCCGGTAAAATTGGCTCTGGAGTATATTAGAATGAGTTTGAGATGAATCTTTTTTAGTGTAATTTTTTTCTTTTTAATATCTATTTGTGAATGTCCTTAGTTATCCACACTTCGATTAATCTCACGGAACACTACAACACTTAGCCATCTAAGTTCATTTAGCCATCAAGAAAACTTAGAGAAAATTAACTTTTAGATACATGGTCACCCTTTTTTAGAAAAATATCATAATGTTTAGTTAAGTAATTAGAAGGTGGTTTGGAAAAATTTATAATAAACACTCGAAAGAATACTTGCATTATTCTGAAGAAAGTAGCTTAGAATAATGTATCTTTTAAGAGATGTGTTTATCAAAAAAGCATTGTTTTCAAAAGAGGATCTCAAAAACCATCTTGATTATTTGCTTTCTTTTTGCACATAAATTAAATGCTTTCTGAGAGTATATATTATGTATGGGAAATGCTTTGAAAATATAGATTTAATATTTAATATTTAATATTTAATATTTAATATTTAATATTTTGAAAGTATATTGGAATTTGAATGCAATTTAATATTTTGCTTTGCTGAATCATTAAAAGTTTAGAAATGAACTTTTAGTTCGTTGGTTAAATTAGAGTTTTGATTTCTGTCGAGTAGGCTTTGAACAACTTTCAATCCAAATTCAATTTTGCTATATTTACCAATTTGATTATTGTATATGGTTGGTTGGGTAGATAGAAGGGCTACAAAGGCATCCAAGATACGGTGCAAGAGTTGAACAACATGCATACAGAAACATGTTTGATGCTTTGAGACGAATTTTGAAAAAGGAAGGAACCGCTGGGCTTTATAAAGGCATCATTCCCTCTACCGTCAAAGCTGCTCCCGCTGGCGCTGTCACTTTTGTGGCTTACGAGATTACTTCTGATTGGCTTGAATCTATTTTAACTTCTTCTTCTTCATGATTCATTCTCTTCTAACCTTTCTCACTTATTACCTAAATTCCTAAATTCTTTTCTTCAGGTTTCAACAATAGAATGCCCCAAAATAGAAAAAAGTTAGGGCTATGCCATTTTTTTTTCATTTTCTTTTTTGTTTTGTTTACATCACCCATTAGATTTTGAGTATAATGTAGAGATGTCGGTGATGGTGCTTTCGAGATAGAAATTTTATCGCAAGCACAACATAAACCTCGAAGGTTTATTCTCATAAATTATGAATTTATTCACATTTTTATTATTAATGAACATCAATCAAACTAACACCTTTTTTCTTTTTGTTTTTGTTTGGTTAGTTTTCTTTGATTATAGATCTGTTACTTTAGAAATAAAAAAAAA ATGGCTTCTCCGCCGATGGAGGAGCCAGGACAATTGAAGCGCGCGATGATTGACTCGACGGCTGGCGCAATTGCTGGTTGTGTATCTCGGACGGTCACGTCTCCTCTCGACGTGATTAAGATCAGGTTTCAGGTTCAACTGGAGCCAACAACTTCATGGGCTTTGGTTCAAAGAAGTTTATCTGGACCATCAAAATACACTGGCATGGTCCAAGCAACAAAGGATATTTTCAAAGAGGAAGGTTTACCGGGTTTTTGGCGTGGGAATGTTCCTGCTCTGCTCATGGTTATGCCATATACAGCTATACAATTTACCGTTTTACATAGACTGAAAACATATGCCGCTGGTTCCTCGAAGACAGAGGCCCACAAACAGTTGAGCCCATCTCTCTCTTATATTAGTGGGGCACTGGCGGGGTGTGCAGCAACCATTGGATCATATCCATTTGATCTTCTTCGAACTATACTGGCTTCACAAGGTGAACCGAAGATATATCCAACCATGAGGTCTGCATTTATTGATATAATCCGCACTCGAGGATTTCGAGGAATGTATGCTGGATTGTCACCTACACTTGTTGAGATTGTTCCATATGCGGGTCTACAATTTGGCACCTACGACACATTCAAGCGATGGACTTCATTTCCCTCGAAATGA MASPPMEEPGQLKRAMIDSTAGAIAGCVSRTVTSPLDVIKIRFQVQLEPTTSWALVQRSLSGPSKYTGMVQATKDIFKEEGLPGFWRGNVPALLMVMPYTAIQFTVLHRLKTYAAGSSKTEAHKQLSPSLSYISGALAGCAATIGSYPFDLLRTILASQGEPKIYPTMRSAFIDIIRTRGFRGMYAGLSPTLVEIVPYAGLQFGTYDTFKRWTSFPSK Homology
BLAST of Cucsat.G5544 vs. ExPASy Swiss-Prot
Match: A0A1D6N272 (Mitochondrial thiamine diphosphate carrier 2 OS=Zea mays OX=4577 GN=GRMZM2G124911 PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96 Identity = 167/205 (81.46%), Postives = 191/205 (93.17%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy Swiss-Prot
Match: Q9FI73 (Mitochondrial thiamine diphosphate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=At5g48970 PE=2 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.9e-96 Identity = 168/206 (81.55%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy Swiss-Prot
Match: B4FIJ0 (Mitochondrial thiamine diphosphate carrier 1 OS=Zea mays OX=4577 GN=GRMZM2G118515 PE=2 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 9.2e-95 Identity = 163/205 (79.51%), Postives = 189/205 (92.20%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy Swiss-Prot
Match: Q8RXZ9 (Mitochondrial thiamine diphosphate carrier 1 OS=Arabidopsis thaliana OX=3702 GN=At3g21390 PE=2 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 5.2e-90 Identity = 156/213 (73.24%), Postives = 186/213 (87.32%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy Swiss-Prot
Match: Q29RM1 (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus OX=9913 GN=SLC25A19 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36 Identity = 82/194 (42.27%), Postives = 120/194 (61.86%), Query Frame = 0
BLAST of Cucsat.G5544 vs. NCBI nr
Match: XP_031743504.1 (mitochondrial thiamine diphosphate carrier 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 430 bits (1105), Expect = 1.74e-150 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G5544 vs. NCBI nr
Match: XP_004143086.1 (mitochondrial thiamine diphosphate carrier 2 isoform X1 [Cucumis sativus] >KAE8646980.1 hypothetical protein Csa_020896 [Cucumis sativus]) HSP 1 Score: 430 bits (1105), Expect = 1.10e-149 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G5544 vs. NCBI nr
Match: XP_008458464.1 (PREDICTED: mitochondrial thiamine pyrophosphate carrier-like isoform X2 [Cucumis melo]) HSP 1 Score: 421 bits (1081), Expect = 7.87e-147 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cucsat.G5544 vs. NCBI nr
Match: XP_008458463.1 (PREDICTED: mitochondrial thiamine pyrophosphate carrier-like isoform X1 [Cucumis melo]) HSP 1 Score: 421 bits (1081), Expect = 4.45e-146 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cucsat.G5544 vs. NCBI nr
Match: XP_038875970.1 (mitochondrial thiamine diphosphate carrier 2-like isoform X1 [Benincasa hispida] >XP_038875971.1 mitochondrial thiamine diphosphate carrier 2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 417 bits (1072), Expect = 1.08e-144 Identity = 206/215 (95.81%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy TrEMBL
Match: A0A1S3C8I0 (mitochondrial thiamine pyrophosphate carrier-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497864 PE=3 SV=1) HSP 1 Score: 421 bits (1081), Expect = 3.81e-147 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy TrEMBL
Match: A0A1S3C7W8 (mitochondrial thiamine pyrophosphate carrier-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497864 PE=3 SV=1) HSP 1 Score: 421 bits (1081), Expect = 2.15e-146 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy TrEMBL
Match: A0A6J1CAQ3 (mitochondrial thiamine diphosphate carrier 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009860 PE=3 SV=1) HSP 1 Score: 410 bits (1055), Expect = 1.64e-142 Identity = 203/215 (94.42%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy TrEMBL
Match: A0A6J1H6D2 (mitochondrial thiamine diphosphate carrier 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460435 PE=3 SV=1) HSP 1 Score: 405 bits (1042), Expect = 1.79e-140 Identity = 199/213 (93.43%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of Cucsat.G5544 vs. ExPASy TrEMBL
Match: A0A6J1KF80 (mitochondrial thiamine diphosphate carrier 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494493 PE=3 SV=1) HSP 1 Score: 404 bits (1039), Expect = 4.94e-140 Identity = 198/214 (92.52%), Postives = 207/214 (96.73%), Query Frame = 0
BLAST of Cucsat.G5544 vs. TAIR 10
Match: AT5G48970.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 352.1 bits (902), Expect = 3.5e-97 Identity = 168/206 (81.55%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Cucsat.G5544 vs. TAIR 10
Match: AT3G21390.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 332.0 bits (850), Expect = 3.7e-91 Identity = 156/213 (73.24%), Postives = 186/213 (87.32%), Query Frame = 0
BLAST of Cucsat.G5544 vs. TAIR 10
Match: AT3G51870.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25 Identity = 72/191 (37.70%), Postives = 101/191 (52.88%), Query Frame = 0
BLAST of Cucsat.G5544 vs. TAIR 10
Match: AT5G01500.1 (thylakoid ATP/ADP carrier ) HSP 1 Score: 108.2 bits (269), Expect = 8.7e-24 Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 0
BLAST of Cucsat.G5544 vs. TAIR 10
Match: AT5G61810.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.5e-23 Identity = 74/214 (34.58%), Postives = 102/214 (47.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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