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Cucsat.G5414 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAACTACATGTCGAAAAATGACACGACAGATCGTTAAAACCGCGAACCGGCAAGTCGGGTCAAGGAAGAAATTGCGTGAAGCGAGTCGCGATTGTGAATTCGCCCCTCGAAAACTTCACGGCCAAAGCCCTGAATCTGCTCCTACAAGACTGCAACCTCATCATGTCGACATTCAAGTTCCAGCTTCAACTTCAATTCTTCGGTCCCACATTCATTCTTCGCGCTTAAGCAAATAATCTGGTTTACGAGACACCGATTCATTCATACACGAGTTTCTACTGAATTTTCTTCGGATTTATTGTTATATTTTGTCTTCAATTGAAGATGAAGATCAACATCGATAGGGAGGCGCGGAAAGTTGCCGTTGATAATCGAATTCCCCTCCGGAATTACTTCCGGATCGCCGATAATCTCTTAAAACAGGTGATCTTTTCGGAATCGTTATTTTTTTATTGTTGTATTTGATTATCGATGCTGAATTGCTAATGGTTGATGATTATTTCGAAGCTTTTCTAATTTTCATTTCCTTCTCTATACGGATGTTGAAGTGATTTTCGTTGCAGTTTTCTTTATCGGTGGTTTAAGTATTAGAATTGTGCTTTGTTGCCATGAATCTTTTTATCCGTAATTGAGTTCGTTTTCTCAAAATGGCAGGCTAATATTTATCGGGAGGAGAATAATGTTGTGGATTTGTTTATCATACTTCTTAGGTTTTCAAGGTAAGGCTCTAGTTGATACTTGTATTTCCATTGCCTAGGGTTGTTGATTCTTTGTGTAGGAGTTCGCTTCTCAACTTGTTTTTATTTTCTTAGCTTGGTTTCTGAAACTATACCACGGCATCGTGATTATCAAGCTTTTTTCCCAAAGGATAAGATATACTATAAGAAGGTGAGTAAGAAGTGCACATCTCGCTTCTTTTCCATGAATGGTGTACGAATGTTGTCTAAAGTTGTTTCATGTTGTCCTGCCAGAAACTACTGAATGTAGTGGATGAACTTGAGTCTTTGAAGCCCGAATTTGATCGTCGGGTAAATGAACTGGAGAAAGTGTATGGACGACCTCGTCTTCCTCCACCTGATGAGCAGGGAAGTGTTTCAAACAGTTTCCGGCCTTCTCCTAAGGAACAGCCGTACGTGAATGGAAATTATTCGTTAATGTTGGATCAAAAGCAGGTATAACCTTCAATTTTTCTAATGAGACTTTCTTTGCTTGTAAATGCAGTTTTAAATGGAAATTCCAGCAATTATTTTGAGTTTCTTTTGCTTTTTTGATTTCTTTCATATTTTCTACATGGGCATGTGATTATTATTATATTACTTGTGATTTGTGATTCTATTCTTGTTCTCCCTTCTTCTCTTGATTCTTAGCATGTGCATTCACGTCCCCAATCTTCACGGAGGTATAGTGATGACCGAGGCCAGGTTTCACAATCAAGTTCCTTAAGGCTTGAGAATAAGTTCTCAACTCTGTGAGTAGACTCCTTTCCCATTTATTTCGCACACTTTTATATGAACAAGGGCATAGTAGTAAGTATAAATACTTCTCTTGATGATGTAGGGAGATAAATCGTTCCAATATTTGTTTCTTATTATAAAAAAATAATTCCAATATTTATGTTCTAGTCCAAGAAAGAAGAAGTAATTTTGTAGTTCAAGTAGTTACCTAAATAGTAGAAGACAGAATGGGACTGGCTAGAACTTGCATTCTGAACCGAGTTGACCGAAAAAAGAAAGTATGTTGACGATGCCAAAGTTCTTTTGCAGCTGTCCTCAAGATTGAATAGAAAGACAGTTTCAGTACAAGGATAATAGACTGTCATAATTTGAATGGGAGCCATAAGAATATAATTCTATGCATACTTATATAGTCACCAGTTTTAAAAAACACAGACAAAGGATCTGATAATTGGTGCTGGAAATATGCAGGTCTCTTAATGTACCGCTTCCCAAACCTGAAACTTTATCTAGACATTCTATTTTGGGACCCAGTGGTCTTCAGGGCCAATGGAAGGGGCCAAGTACAGATAAGGTGAGTTATTGCGTATTCCTTTTTTAAATTGTTATCTCTTGTTTCTGCCGATTCCGAAATTCACTAACAGATTAATCCTATTGTTCTATACAGATTCAATATCCAATAAATCAGGACTTCACTCTTGAAGATTCAAGGTTAGAGGCATATATAACTCGTACTATTGTTTGAAAACTTAACATTCTTTTTTTCTGTGTTTTGAATGTTCTCTTTCCTGATGACAAACATGTAAAAGATATTAATATTCTCTGCCTTCAAATTCTTTCAGACTGAATCAAAATGAACATTGTGATCTAGTGGCACACAAAGATAGTGGTCCAGGCGGTGTTATGTCAGTGATGGAGTCAGTGCTCTCACTAGATGATGGTAGATGGCCTCATCCCGCCGACATGTCTATTCCTCCGTTGATAACAGAAGTAAGGGAGGATCCTTTCCCATTGGTCAAACAACCTTCTCCTCCTCCTGTGCTTGCTAAGGTTCAGCAGGAGTATGCAACAATTCCCCCATCTAAAGTTGCAGATCCAAGGCCTGGAGTGGCCAGGCAATCGCAGGATGAGTCTGAATCGTTTCAACGTCTACACATTGTAGGGCTTTTTCATTTTTGTTATAACTTCAGAAAGCAAGCAATTATTCACTACTTCCTATTGCAATATGTAGTGATTCCTTTTGATATGATATTGGTTACTTTTACTTATTGCTGCAGCCAGTAAAAATGCTTGATGATTTCTTGAGATTGGCTCGGGAAAATACAAATAAGAACCTGGAAACTTGTGGTGTTTTAGCTGGCTCTCTGGTAAGAACAAATTAATGGTTTAATTTAATTTATTTTTAAAGATTTTTTAATATGTTCTCATACTTCATTATATATTTGCAGAAAAACAGGATTTTTTACATATCTACGCTCATAATCCCAAAACAAGAATCAACATCAGATTCCGTAAGAATATAATTACTTTTCAATTGTTTCAAGTTTAAATTAGCCATGTTTTCCATGTTATTGATTTTCACTGCTTTTGAATGTTTAGTTTTTATATGACTGGTGAATGGTGATTGTAGCTTTGAACATGTTAGTTAAAGTAGGCTGTGCATATGTTTGAGTTTTAATTGTTTTATGGTTTGGGCATTTTTTATTACTTTTACCTACACTCCTATGCTAGTGGTTCAGTAGTTACGACTATTACCCTTTAATCAATACCGAGAAATAATTTCTTTTTGTAATGTTCAGTGTCAGACGTTGAACGAAGAGGAAATATTTGAAGTTCAAGACAGATTATCACTTTTCCCTCTTGGTTGGATCCATGTAAGCTTGCTGACTCTCTAGGCAATCGATAGCATGAATCTATGATTATAGAATTGCAGAACGCAGAATTAGAAAACTTGGGATGATTATCTTGATTTCTATTGATGCTTCACAAATAATTTGTTTTTGTATATACTGTTCATAGTACGCTCTCTTAGTTCCATTACAGTTTATGATACGGATAGAACAGAAAACAAATAACGGTAATGTTCCCTGGCACATAAGAGAAGGTCAATCTAGATAGACATTCTAACCTCTCACCAAAATTTACTTTCTTTTTTGCTCATGGACTAACCACATTCCACATATAGACTAACATTACACAAGACAACGGAGCTACCTACAAGTATAACCTTCCTCAACTGCCCATAACTACCAGCAACATTTCATAACTACCCACCACAGCTCATAACTACCTGAAAGACTAACTTTTCTCCTCCGTCTCCCCTCTTCTTTACAATCCTTGTGTCTTTCACATGATGCTTATCTTCTCACCTTATAGAGTTACTGTAGAAAACTCATCGACTATCAGTCTAAAGATAAAAGCAAAGCATTTCCTTCATAGGATGTTGGACTGCACTTTCTGTCGTTATAAAAAGTGGAGGTAGTGTTGTTATCGTCAAAATTTAGCAAGTCTTTGCATTATTTCACTTAAGTTGACTTGCTATGCAGTGATGTCTTGGCTGGTATGGGCAGTCTTGTGGGGTTTTTAGATTAAGAGGAAGAATAAAATATTTAGAGAAATGGAGAAAGCAGGTGAAAAAGCTTTAGAGGTAGCTACTAGCTAGGTTTAGCTCCTTATGAGTTGTGGGCCAGTCACTATGCTTTTTTATGCTTTTTTTGTAATTATGAGCGAGCTTGGTCTTGTTTTTTTTAGATTGGAGTCCTGTTCTTTTCAGTCAGAGTTGGATTTTTTTGTACCGGGTATATTCTTTCATTTCTTTCCATAAAAGTATGGTTTCTTAAAAACTAATAATGAATAAAAATTAAAATGCAAAGTACAACAGTGGAATATAATTTCCGTTGTATACTTTCTTGAGAATATATGAATATTTGGTGTTAACGTTTCTATTGGCCGTATTATCTATGGAAGAAACTTCTATTTTGATATTTCCTGTCTCTTATTCTTTGTTTGATTCTCAGACACACCCATCACAAACCTGTTTCATGTCGTCTGTGGATTTGCACACGCATTACTCGTACCAGGTAAGATTACAATTGTACTCACTTTTCTTTTTCACAACCGATATATTTTTTCTGAGTGTTACTCAAAGAACAAGTTTAGTTATTCTCATAACGGTGGAAGTTCCATCATGAAATTGAAGTCCTAACTTGTGAAAACTTTTATCTTCTTTGCATTATTTGCTCTTCCTGTTCTAGTTTCTTTTGCCTCGTCTAAGGAATTTTTTTGCTTCAGATTATGCTACCAGAAGCAATTGCAATCGTCATGGCTCCGACTGATACGTCAAGGTGTGTTTTCCCCCTCCATTCACTCAACTCTCACTGTTTCCGTTTCTCCAATCTTGTATTTATATCATTAGCTAACAAGTGCCATTGCTATTGCAGTCCATATGGAATATTTCATCTATCCGATCCAGGCGGTGTATCAGTCATCCGCAACTGCCAACAGCGCGGATTTCATCCCCACGAGGAGCCTGACGATGGGAGTCCACTCTATGAACACTGCTCTCATGTTATGATGAATCCAAATGCAAAGTTTGACGTTATGGATCTAAGGTAAGATTTTGATTGTATAGCACCCTGGAAATAGATTTAAAAAAAAAAAAACTTAACACTTCAACAACCGCTATGTAAATTTTGTAATTTGCAAATCCAATTGAGTTACTGCCATTGTTGCGAGACTTCGGGCGGTGGCTATAATAAAAGCCTTTTGTTGTGCCGAAGTTCTCTATGATTAAGGTTTCTCTTTGTTGAAAGAATAGTTTCTAGTTATATAATGTACATGATAACTTCATTTCTTTTTCATGCCTTAGAGAGCCTTTTTTTTTTTTCCTTCTTTAGATGTAAACTTTTGTTGTGGACATTATTTGTGATATGATATTATTTTGGGTTGATGCATTCCTCTTTTCTTTTTAAGAAATTTTAAAAGGGAATGATTTCCATCCATGATGATCACCTACTTAGAATTTAATATTCAATTAGTTCCATTGATATTGGATTGATTTAATATTCAATTAGTTCCATTGACACTCGGTTGATGTAGGATTTGAGGGATCTTTTATTGAGATTAGTTGAGACGCACGTGAGTTGGTTCAGATGGTATAAACATAGAACATAAAGTAAAATAAAATAAAATAATAAAAATGTAGTTGGTTTGATAAAAAAATATAGTCCAATTTTCATTTCTTTCAAATGTTTTTGCCTATTTCCCTTTTATGTTTTAATGGCTCATCTCTTGATATTTTAAAATTTATTTTTGAGATTAACTTTTGAAATAATATTTAATGAAAAGGCGGTTGAGTTGCAACAAATATTCAATAATTATATTTTATTGGATTTTGATAGTTAAGTTTACTCAAGCAAATGGACCCAAGTCCAAGTCTAAACCCAATAAGGCAAATGAGTCCAAGTCTAAGCCCAACAGGCAAATTGATCAAAATCCAAGTCCAACAAGCAAATGGATCAAAACCCACCTAAAGCCCACAAAATTTCTCTATAAATAGAGACATTTGTGTAGATCCCTTGTTGAAGGAAGAATTGAAGCTCTGAAGTACTGAAGTTCTAAAGAATTGAAGATTCAAACTTCTATAATGCTCTCAAGACGTGCAAGTTATTATCAAC ATGAAGATCAACATCGATAGGGAGGCGCGGAAAGTTGCCGTTGATAATCGAATTCCCCTCCGGAATTACTTCCGGATCGCCGATAATCTCTTAAAACAGGCTAATATTTATCGGGAGGAGAATAATGTTGTGGATTTGTTTATCATACTTCTTAGGTTTTCAAGCTTGGTTTCTGAAACTATACCACGGCATCGTGATTATCAAGCTTTTTTCCCAAAGGATAAGATATACTATAAGAAGAAACTACTGAATGTAGTGGATGAACTTGAGTCTTTGAAGCCCGAATTTGATCGTCGGGTAAATGAACTGGAGAAAGTGTATGGACGACCTCGTCTTCCTCCACCTGATGAGCAGGGAAGTGTTTCAAACAGTTTCCGGCCTTCTCCTAAGGAACAGCCGTACGTGAATGGAAATTATTCGTTAATGTTGGATCAAAAGCAGCATGTGCATTCACGTCCCCAATCTTCACGGAGGTATAGTGATGACCGAGGCCAGGTTTCACAATCAAGTTCCTTAAGGCTTGAGAATAAGTTCTCAACTCTGTCTCTTAATGTACCGCTTCCCAAACCTGAAACTTTATCTAGACATTCTATTTTGGGACCCAGTGGTCTTCAGGGCCAATGGAAGGGGCCAAGTACAGATAAGATTCAATATCCAATAAATCAGGACTTCACTCTTGAAGATTCAAGACTGAATCAAAATGAACATTGTGATCTAGTGGCACACAAAGATAGTGGTCCAGGCGGTGTTATGTCAGTGATGGAGTCAGTGCTCTCACTAGATGATGGTAGATGGCCTCATCCCGCCGACATGTCTATTCCTCCGTTGATAACAGAAGTAAGGGAGGATCCTTTCCCATTGGTCAAACAACCTTCTCCTCCTCCTGTGCTTGCTAAGGTTCAGCAGGAGTATGCAACAATTCCCCCATCTAAAGTTGCAGATCCAAGGCCTGGAGTGGCCAGGCAATCGCAGGATGAGTCTGAATCGTTTCAACGTCTACACATTCCAGTAAAAATGCTTGATGATTTCTTGAGATTGGCTCGGGAAAATACAAATAAGAACCTGGAAACTTGTGGTGTTTTAGCTGGCTCTCTGAAAAACAGGATTTTTTACATATCTACGCTCATAATCCCAAAACAAGAATCAACATCAGATTCCTGTCAGACGTTGAACGAAGAGGAAATATTTGAAGTTCAAGACAGATTATCACTTTTCCCTCTTGGTTGGATCCATACACACCCATCACAAACCTGTTTCATGTCGTCTGTGGATTTGCACACGCATTACTCGTACCAGATTATGCTACCAGAAGCAATTGCAATCGTCATGGCTCCGACTGATACGTCAAGTCCATATGGAATATTTCATCTATCCGATCCAGGCGGTGTATCAGTCATCCGCAACTGCCAACAGCGCGGATTTCATCCCCACGAGGAGCCTGACGATGGGAGTCCACTCTATGAACACTGCTCTCATGTTATGATGAATCCAAATGCAAAGTTTGACGTTATGGATCTAAGTTAA MKINIDREARKVAVDNRIPLRNYFRIADNLLKQANIYREENNVVDLFIILLRFSSLVSETIPRHRDYQAFFPKDKIYYKKKLLNVVDELESLKPEFDRRVNELEKVYGRPRLPPPDEQGSVSNSFRPSPKEQPYVNGNYSLMLDQKQHVHSRPQSSRRYSDDRGQVSQSSSLRLENKFSTLSLNVPLPKPETLSRHSILGPSGLQGQWKGPSTDKIQYPINQDFTLEDSRLNQNEHCDLVAHKDSGPGGVMSVMESVLSLDDGRWPHPADMSIPPLITEVREDPFPLVKQPSPPPVLAKVQQEYATIPPSKVADPRPGVARQSQDESESFQRLHIPVKMLDDFLRLARENTNKNLETCGVLAGSLKNRIFYISTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTSSPYGIFHLSDPGGVSVIRNCQQRGFHPHEEPDDGSPLYEHCSHVMMNPNAKFDVMDLS Homology
BLAST of Cucsat.G5414 vs. ExPASy Swiss-Prot
Match: Q5PNU3 (AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2) HSP 1 Score: 245.4 bits (625), Expect = 1.1e-63 Identity = 152/341 (44.57%), Postives = 212/341 (62.17%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy Swiss-Prot
Match: Q8VYB5 (AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41 Identity = 130/341 (38.12%), Postives = 184/341 (53.96%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy Swiss-Prot
Match: O95630 (STAM-binding protein OS=Homo sapiens OX=9606 GN=STAMBP PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.1e-07 Identity = 41/137 (29.93%), Postives = 64/137 (46.72%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy Swiss-Prot
Match: Q9CQ26 (STAM-binding protein OS=Mus musculus OX=10090 GN=Stambp PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06 Identity = 39/137 (28.47%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy Swiss-Prot
Match: Q8R424 (STAM-binding protein OS=Rattus norvegicus OX=10116 GN=Stambp PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.5e-06 Identity = 44/159 (27.67%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of Cucsat.G5414 vs. NCBI nr
Match: XP_004150079.1 (AMSH-like ubiquitin thioesterase 3 [Cucumis sativus] >KGN47397.1 hypothetical protein Csa_022999 [Cucumis sativus]) HSP 1 Score: 659 bits (1701), Expect = 3.24e-235 Identity = 331/335 (98.81%), Postives = 333/335 (99.40%), Query Frame = 0
BLAST of Cucsat.G5414 vs. NCBI nr
Match: XP_008458380.1 (PREDICTED: LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 3 [Cucumis melo]) HSP 1 Score: 629 bits (1621), Expect = 4.79e-223 Identity = 319/335 (95.22%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of Cucsat.G5414 vs. NCBI nr
Match: TYK02941.1 (AMSH-like ubiquitin thioesterase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 629 bits (1621), Expect = 9.64e-222 Identity = 319/335 (95.22%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of Cucsat.G5414 vs. NCBI nr
Match: XP_038875747.1 (AMSH-like ubiquitin thioesterase 3 [Benincasa hispida]) HSP 1 Score: 613 bits (1581), Expect = 5.80e-217 Identity = 309/335 (92.24%), Postives = 320/335 (95.52%), Query Frame = 0
BLAST of Cucsat.G5414 vs. NCBI nr
Match: XP_023006407.1 (AMSH-like ubiquitin thioesterase 3 isoform X3 [Cucurbita maxima]) HSP 1 Score: 585 bits (1508), Expect = 3.62e-207 Identity = 298/335 (88.96%), Postives = 310/335 (92.54%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy TrEMBL
Match: A0A0A0KG71 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G311020 PE=3 SV=1) HSP 1 Score: 659 bits (1701), Expect = 1.57e-235 Identity = 331/335 (98.81%), Postives = 333/335 (99.40%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy TrEMBL
Match: A0A1S3C8Z8 (LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 3 OS=Cucumis melo OX=3656 GN=LOC103497805 PE=3 SV=1) HSP 1 Score: 629 bits (1621), Expect = 2.32e-223 Identity = 319/335 (95.22%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy TrEMBL
Match: A0A5D3BT78 (AMSH-like ubiquitin thioesterase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00210 PE=3 SV=1) HSP 1 Score: 629 bits (1621), Expect = 4.66e-222 Identity = 319/335 (95.22%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy TrEMBL
Match: A0A6J1KVR7 (AMSH-like ubiquitin thioesterase 3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499142 PE=4 SV=1) HSP 1 Score: 585 bits (1508), Expect = 1.75e-207 Identity = 298/335 (88.96%), Postives = 310/335 (92.54%), Query Frame = 0
BLAST of Cucsat.G5414 vs. ExPASy TrEMBL
Match: A0A6J1L013 (AMSH-like ubiquitin thioesterase 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499142 PE=3 SV=1) HSP 1 Score: 585 bits (1508), Expect = 3.52e-206 Identity = 298/335 (88.96%), Postives = 310/335 (92.54%), Query Frame = 0
BLAST of Cucsat.G5414 vs. TAIR 10
Match: AT4G16144.1 (associated molecule with the SH3 domain of STAM 3 ) HSP 1 Score: 245.4 bits (625), Expect = 7.5e-65 Identity = 152/341 (44.57%), Postives = 212/341 (62.17%), Query Frame = 0
BLAST of Cucsat.G5414 vs. TAIR 10
Match: AT1G48790.1 (associated molecule with the SH3 domain of STAM 1 ) HSP 1 Score: 172.2 bits (435), Expect = 8.1e-43 Identity = 130/341 (38.12%), Postives = 184/341 (53.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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