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Cucsat.G5393 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAAAACGAAGCCCATTAGAATTCAGCAAGCCCAAAATCGAGCTGCCCAAACATTAAATTAGGTCATCAGAAACCCTAGCTTGAGCTCTTTCAAATCCCTCGCTGCTTCATCTGCTCTTCGATTTCTTCTCCAATCTCTCTTGTGCTTTCCGTTCAGAAATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGGTATGCGATTTTCTCTTACAATCACTTCTGCTCTTGTTGAATCCATTGTGTTTCTTTTTAATTTGTTTTAATTCTCGTGGATTTGTGTATAGATGGACCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAATGCTTCTGGGGAAGAGTAAAGTAGCCTCCGCCAAGTTTAGGGTTTTTATTATTCAAATCTTTTGTTATTGCTCTTATTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATGTTTTACGAAAATACATTATCTGATTTGCAATTTTAAAGGTTCTACTGTTGATTACATCTTCATACCTTATGAACTTGTTTAATGATGGGTTTAATTGCAACTTCATTTTCCATCATTGAATTTTCAAGTTTAGTGACCAAATTCACGAACTTGAACGACTTGAAATTTGACACAATGTTTTCAATGGTGTAAATTTTGCTACAAAGCATGTTATAATGGGATGTGGTCTTTGATTTATTGGACAACAAGCTTCATATAAATCAAGCAAACTAGTATAAACCTTTTATCATGAGTTGGTCCCAGTGGGCAATGGCTTTGATATTGGATTGTGGGTTCTTTGGTAGCCATCAGTTGCCTGGGAGTTTCAAATGTGGTAGGATCATCCGGTTCTCATTAAGATATTATATAAAAAAAATAGAGTTTCGTAAGTTCGACTCGTAGATGTTTGGATGGAGCATAATCTGAGGCACTGCCCCATGGTTCGTGATGGATGAGCTGCAAAGGCCATCTTGTAAAGTAATTTCCGCCGATCAGATGCAACTGGACAGGGTATTGGACCTTACTGCCACTTCCAGTATGTTCCACTAAGATTCAGTTTGTGATTCAACCCTCTAGGAAAGAAAGATGTTTGGATGCAACTATTAGAGCTGTCTGTCGATGTTTGGATGAAACTTCCTAGGTGCAAGGGCATGAGACACTCAGTTCCATTTAAAACTGTAAAATTCGGTGGAAGCCGGAAAGGAAGGAGAAGGCCAAAGGCGACAAAGGTGGTACCAGTGGAGATGAAAATAAGTTCTTAGTCCCTAAAC ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAATGCTTCTGGGGAAGAGTAAAGTAGCCTCCGCCAAGTTTAGGGTTTTTATTATTCAAATCTTTTGTTATTGCTCTTATTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATGTTTTACGAAAATACATTATCTGA MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGKSKVASAKFRVFIIQIFCYCSYFCSVVLIFDSIWRLLRLRHVLRKYII Homology
BLAST of Cucsat.G5393 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-20 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy Swiss-Prot
Match: P47915 (60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14 Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy Swiss-Prot
Match: P25886 (60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14 Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 2.9e-14 Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Cucsat.G5393 vs. NCBI nr
Match: XP_011657268.1 (60S ribosomal protein L29-1 [Cucumis sativus] >XP_031743224.1 60S ribosomal protein L29-1 [Cucumis sativus]) HSP 1 Score: 113 bits (282), Expect = 1.79e-30 Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Cucsat.G5393 vs. NCBI nr
Match: XP_008458370.1 (PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo]) HSP 1 Score: 110 bits (276), Expect = 1.47e-29 Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Cucsat.G5393 vs. NCBI nr
Match: XP_010534701.1 (PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana]) HSP 1 Score: 109 bits (272), Expect = 5.98e-29 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Cucsat.G5393 vs. NCBI nr
Match: XP_008458371.1 (PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo]) HSP 1 Score: 108 bits (271), Expect = 8.49e-29 Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Cucsat.G5393 vs. NCBI nr
Match: XP_010558440.1 (PREDICTED: 60S ribosomal protein L29-1-like [Tarenaya hassleriana]) HSP 1 Score: 108 bits (270), Expect = 1.21e-28 Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy TrEMBL
Match: A0A0A0KCX6 (60S ribosomal protein L29 OS=Cucumis sativus OX=3659 GN=Csa_6G309950 PE=3 SV=1) HSP 1 Score: 113 bits (282), Expect = 8.67e-31 Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy TrEMBL
Match: A0A1S3C7U0 (60S ribosomal protein L29 OS=Cucumis melo OX=3656 GN=LOC103497797 PE=3 SV=1) HSP 1 Score: 110 bits (276), Expect = 7.11e-30 Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy TrEMBL
Match: A0A1S3C7P2 (60S ribosomal protein L29 OS=Cucumis melo OX=3656 GN=LOC103497798 PE=3 SV=1) HSP 1 Score: 108 bits (271), Expect = 4.11e-29 Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy TrEMBL
Match: V9HZW1 (60S ribosomal protein L29 OS=Ipomoea batatas OX=4120 GN=RPL29 PE=2 SV=1) HSP 1 Score: 107 bits (266), Expect = 2.37e-28 Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Cucsat.G5393 vs. ExPASy TrEMBL
Match: A0A2R6PJK9 (60S ribosomal protein L29 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc27140 PE=3 SV=1) HSP 1 Score: 106 bits (265), Expect = 3.37e-28 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Cucsat.G5393 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. TAIR 10
Match: AT3G06680.3 (Ribosomal L29e protein family ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family ) HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Cucsat.G5393 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family ) HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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