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Cucsat.G5390 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTATATTAAGGTAATATCTATCCTTGTTTAAAAGTATAAATTATATAACTTATATGGTAATAATATTTTTAATTATCCTATATAATTAGTTTCAATTTAACGTCAAACCAAAAGTTTTTTTTCAAGCCATCATCCATTCCAGTCGGATTTCTTTTTCGATCCGTGTAGAAATTGGTCTTTATATTTTTTGTTCAATTATGTGAACTTATTCTTTCGTTTTCTAGCATATATTTTTTTTCTTAAAAAAATTTGTTATTTCTTTTTCCATTTTGTAGCATATATTCTGATAATGTTCTTTTTATTTTTTTTAATTTTATATTCTAAATTTCTTATTGGATTGACGCCTTTTATCTAAAAATGTTTGGTATACATGTGTATACATAAAATAAAAGGTCACTAGAAATGCCCCCTGGTGTTCAGTCCCTTTTAATTTCAAAGAATGGCCCAGTGGACTCTGAGCTATGTTTTAGGAACCTAATATAGCCGAAATTAGGCCCTAAGTTTATTTGTACAAAAAAGATTTCGTGGGCCAACGCAAATGTAAGATGCTGGCCCATAACCTGAAACTATTGGGCCATCGGCTATTTGTAAACCTTGTGGGCCTACTTTAGTGGATCATTTACCCTACAAATGCTAACGTGATTTTTTACCACCTCGATTTACTATCTTGTGGATAAAAAACAAAAAAAAGATAAATTAAGTTTGTGAAAATACCACAATAATCAAAAGGCTATGATTTCATATTATGGTTATTTATGGTAACAAATGTATACTAGTTTATGGAACAATATCAATTATTTCTATTTTAGAATTACCTACTTCAAGGATTTGAAGACCAAATATTCCCAAACCTTATTAGCTAAAGTCCACCCAACGATGAACAACACGATTTGTGAATTTAGGTTTGAAATTATAATTCTTTTTGTTGAAGGCAAAAAAATAAATACTTATTTGATTAAGTATGTAGACTGATTGGAAAGATATAAATTTATTTTGCTAAGAACTAGTGTTAATTATATGTTTTAGGCATAAAATCATAAGTTAATTTTTTAAGTATGTAGGTAGATATACAAGGACGGTCACAAAGCCATAATGCTCAAATATGAATCCTATATATGGACGATTGTAGAGTTGAAGGAGGCAGATTCTATCACAATAAAGATTATGTCTAAGTGTGATAGTTTTGTGCATTATCAGGTCACTCGTGTAATAAATACATGCAGTCCACGATGGTTAGTGACAACTTTGATTAATGATATGGTGAGTTAAATAGCAAATAACCATGAAACCTATTTCTATATAATTAATAGCGTTATTGATATTTGAGATATGTGAAAATACATTAGAAACTATATAGTATTTAGGTCTCTAAGCAATAACTGACTTGATCGTTGAAGTGTCGATGTCTAAGCACTATACTGGTGCAAGTTTTTCTTCTATTATGTAAGGACATCAACAGATGACAAGTGAAATTTGGCAGCAAGTGGCACGAAAGAATTTCAAGTGTAGAAACATCTACATTCATTTATGAAACTCGGTTCAAACAACAAAACTCGAATATTAACATGATCGTGTATGATTGAAGAGATGACTGTAATAATCGAAAGAATCAATCCATGAGTTGCAACCCTCCTATGATATTCCAAAATTCACACCGCCTTTTGGGCATCCTTAGCTGCCATGGATGGTTTCATTAGACCACACTCCCAAACAATGAAAACAAAAACTAACTCCAAATTGATCCTCAACAGACCCTTTCGAAAACAAAATGTAAAAAGCTACTTTATTATTATTTTTTTCTTCATCATTTTGTGTATTTTTTATTGGTATTTTTTTTGCGATAGTTTGTAAGTAGTTTCATTATTTTGCCATCAACGATAGTTTTCTTATTAAATATATATATACACACGAAGTAATTTTCTAACAAGATAGTTAAAAGAAGTTTTTTGAAAAATAGAAAAATTAAGAAACTGTCCACTCTGAAAAAACATTAAAATTAATTTAAAATAATATAAATATTTTATCAATTTTTTTAATTATATTAGAGATTTATTGAAAAAGAAAGTACAAAATATTAAAAATATTTATCAATATAACAAAACATCCCTTCAACCAACTCTTAACAACGTCTACTAGTTAGAAACCATAGTGCTATTGTAAATCTATTATTAACAAATAATGATATTTAGCAATATTTAAAAACAACCCAAAAAAAAATATACTCAGGACGTTAATTTAAAAACAAAGGGAGTAAAATTCAATAAACCCCCAACTATAGGGATAGGGATGGAGTTTAACATATTTTTTTATTTTTTTTTTCGAAAAATGAAAAATAAAGAATAGAAGGATTTGAAATTGAAATATAGCGCGTTTTATCTTTAATATTTAATAATCAAATTTGGGAGGGGTTCTTTTTTTTTTTCTTCTTCTTCCAGCGTTATATTTTGGCGGGTACGCTGAGAAAGTCGAGAGAGGGGTATTTTCGTCATTTCATAAACACAGATCGATGACTAGGGTTTCGTTATCCGGTTGTATATTAAGTCGGTTTTTTCTGCCCTAAAGTGGCTGCTAAACCGTGTCGGTTCAATCCTTCTTCTTCATTATCATCATCTTCATCTTCTTCTTCTCTCTTTCTTCGTGCCACTGATCGCTCTCACTCTGTTCTTTTCATATCTCTTTCTCTCTCTGCATGTCGGTTTCTTCTCAGATTTCTATTATCTCCTTTTTCACTGTTTTTGTAGTTCCAGTTCTTCGCATTTTTCGTTTTAGTATTGATTGTTTGAGTGGTTTTGTTCGTCTGATCTTCTGTTCAAACTTCCGTTTACGTCCTTCGAATTCGAGTTTGAGTTTGAGCTCTTCTTCTAGTGCATTTCTCCTTCAGTTTCCTTTGATTTTATGACTCCAATTCGTCTCCACCGCTTTCAATCGTCAACATCCTCTTTCCGCTTCCATCTTCGGTGCTGGTTCGTCTCAGATCTTTGAGATTTCTACTGAAAAATGATGGATCCGATCGAGGAAGTGAGTGATCGCGATTCGCGAGTCTTTATTTGAGTTGATTTCTGTACTGATTTTGAAATTATTTTAGTATTGATTCGATTGTACTGTGCTGGAATATAGGGATCGGAGTTCAAGGATGCTGGAAAGACATCGCCGATGGAGAGTGAGCAGAATAAAAAGACCTGCGCCGATTGTGGAACGACGAAGACTCCTCTCTGGCGTGGAGGTCCGGCTGGCCCTAAGGTGATTTATTCTTCATCCCCATGTCTAACCTCGATCAAATCTTCTGTTTGATTTTCCATTTCTATGGCTCGATTTTAACGATCAGAACTTGGTTTTTTTTTGTGCTCAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGATCGCTACTAGGTTTAAACAGAGGAGGGGAAGTAGAGAGGAAAAACAAGGGTAGTAGTAACAACAGAAACAACAATGGCGGTGGAAATCAAGGAAAAATTGGTGGAGAAAGCTTGAAATGGAGATCGATGGCGTTTGGTAGAAAAGAATTAATGCAAAGGAGACAGTTGGGAGAGGAAGAGCAAGCTGCTGTTTTGTTAATGGCTCTTTCTTATGGATCTGTATATGCTTGAAATGCTAATATAATTAATGGAATAGTTCCATTTTTTCTTTTTTTTGGAGCCTTTATGATTTCTTCAGAGTATTTAACCTTTTAACTGTAATGTAGCATTTGAGCATTTCCTTTCTTCAATGGATTGATTCTCTTTTATTTTGTGTTTTGTGTGTGTTTTTTTTCTTCTTTTTTGGATGTTTAAAATTCGTTTT ATGATGGATCCGATCGAGGAAGGATCGGAGTTCAAGGATGCTGGAAAGACATCGCCGATGGAGAGTGAGCAGAATAAAAAGACCTGCGCCGATTGTGGAACGACGAAGACTCCTCTCTGGCGTGGAGGTCCGGCTGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGATCGCTACTAGGTTTAAACAGAGGAGGGGAAGTAGAGAGGAAAAACAAGGGTAGTAGTAACAACAGAAACAACAATGGCGGTGGAAATCAAGGAAAAATTGGTGGAGAAAGCTTGAAATGGAGATCGATGGCGTTTGGTAGAAAAGAATTAATGCAAAGGAGACAGTTGGGAGAGGAAGAGCAAGCTGCTGTTTTGTTAATGGCTCTTTCTTATGGATCTGTATATGCTTGA MMDPIEEGSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA Homology
BLAST of Cucsat.G5390 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.4e-26 Identity = 75/118 (63.56%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24 Identity = 79/147 (53.74%), Postives = 94/147 (63.95%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18 Identity = 67/166 (40.36%), Postives = 88/166 (53.01%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Cucsat.G5390 vs. NCBI nr
Match: XP_004150081.1 (GATA transcription factor 16 [Cucumis sativus] >KGN47402.1 hypothetical protein Csa_022928 [Cucumis sativus]) HSP 1 Score: 273 bits (699), Expect = 1.89e-92 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of Cucsat.G5390 vs. NCBI nr
Match: XP_008458384.1 (PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo] >TYK02936.1 GATA transcription factor 16-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 271 bits (693), Expect = 1.55e-91 Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of Cucsat.G5390 vs. NCBI nr
Match: XP_038875288.1 (GATA transcription factor 16-like [Benincasa hispida]) HSP 1 Score: 251 bits (641), Expect = 1.28e-83 Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0
BLAST of Cucsat.G5390 vs. NCBI nr
Match: XP_022138518.1 (GATA transcription factor 16-like [Momordica charantia]) HSP 1 Score: 241 bits (614), Expect = 1.91e-79 Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of Cucsat.G5390 vs. NCBI nr
Match: XP_023548663.1 (GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237 bits (605), Expect = 4.51e-78 Identity = 125/143 (87.41%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy TrEMBL
Match: A0A0A0KG76 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G312540 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 9.14e-93 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy TrEMBL
Match: A0A5D3BXI1 (GATA transcription factor 16-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00160 PE=4 SV=1) HSP 1 Score: 271 bits (693), Expect = 7.52e-92 Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy TrEMBL
Match: A0A1S3C8C2 (GATA transcription factor 16-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497809 PE=4 SV=1) HSP 1 Score: 271 bits (693), Expect = 7.52e-92 Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy TrEMBL
Match: A0A6J1CD73 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009666 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 9.26e-80 Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of Cucsat.G5390 vs. ExPASy TrEMBL
Match: A0A6J1KXU7 (GATA transcription factor 16-like OS=Cucurbita maxima OX=3661 GN=LOC111499182 PE=4 SV=1) HSP 1 Score: 236 bits (601), Expect = 8.88e-78 Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of Cucsat.G5390 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 ) HSP 1 Score: 117.9 bits (294), Expect = 6.7e-27 Identity = 75/118 (63.56%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of Cucsat.G5390 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 ) HSP 1 Score: 112.5 bits (280), Expect = 2.8e-25 Identity = 79/147 (53.74%), Postives = 94/147 (63.95%), Query Frame = 0
BLAST of Cucsat.G5390 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 ) HSP 1 Score: 92.4 bits (228), Expect = 3.0e-19 Identity = 67/166 (40.36%), Postives = 88/166 (53.01%), Query Frame = 0
BLAST of Cucsat.G5390 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein ) HSP 1 Score: 80.9 bits (198), Expect = 9.1e-16 Identity = 68/182 (37.36%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of Cucsat.G5390 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 ) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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