Cucsat.G4820 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCAAATTATTATTATTATTACTACTAATGTATGGATAATAGTTATAAAAACTTCTTCCCAACTTCCTCATCCAGTTTCTTCCACAACTCATTAGCTATGGACGAGGAGGAGGATGATGAGTTGGAAGAAGAAAGAAGTTTGAAAAAAGTGAAAAGTGAAGAGTCTGGAGGGGAACTGAAGAAGAAGAAGAAGATAAGAAAAAGGAGATTTGCATTTGAAACGAGGAGCCAAGTTGATGTTCTTGATGATGGCTATCGTTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGTTCTCATCTTTTAATTATTTATTTCAATTTCTTCTTTCTCAATTCGTTTTTTTGATCAAGCTAGTGTTGATTATATATTGAATATATGAACTTAAACGGTATAACTCTCCACATATAAAATGGTTAGGGTGAGAAATTCAAATATTTTTTAACGAAGATATATGTCTTAACTAGTTGAGTTATGTTCAAGTTGACATCATCTTAAAATTAAACGATGAGATTTATGAATATATATATATATAGGAGCTATTACAAGTGTTCGAATGAAGGCTGCAAAGTGAAGAAGCAAATTCAAAGGCTAACAAATGATGAAGGAGTTGTATTGACAACGTATGAAGGAGTTCATTCCCATCCTATTGAAAAACCTCATGATTCCTTTCAAAATATCTTGACCCATATGCATATTTACCCTTCTTCTTCTTCCTTTTAAATCCCCCTTTTAATTATATTTCATTTTATTAATTTACTTCTCAACACAACTTTTATATTCATCAATGGTTGACCCCTTGGTCTTCATTCTTAAAAAAATCAACTTATTAAAGACAAAATCATTTTTTCATATTTCATATAACATTTTGTGTATATAAGAAACATCAAAATTGTAACCCTACAAATAATGTATTTGATCTAAAGTTGAAAAGTTTGAAGCCTATTATACATTTTTTTCGAACTTCATCAACCATAGTCTAAATCTAAGAGTGTTTCAGCAAAACATCCATCTAAATCCAAGAGCAATCAAGTCCAAATAAAAAGAAAGAAAAGTTCATGCAGTTTCATTTTCAGTTCTACAATCAGGAATAATGAAGAAGAGGATGCTTCATTTACCATATATCTCTATTCCATCATCATTCACCTCCTCAATATTCTTCCTTGCCACTTCAAACGTCTTCTTCTTATTTCTGTTTTATTATTGAAGTTCTTTTTTTTTTGTATAGTTCTTAAGCCATGATCAAAATATCGATTAAAATAGGATGAAATATCTATGAATTTGAAGGGTATGAATTTT ATGGATAATAGTTATAAAAACTTCTTCCCAACTTCCTCATCCAGTTTCTTCCACAACTCATTAGCTATGGACGAGGAGGAGGATGATGAGTTGGAAGAAGAAAGAAGTTTGAAAAAAGTGAAAAGTGAAGAGTCTGGAGGGGAACTGAAGAAGAAGAAGAAGATAAGAAAAAGGAGATTTGCATTTGAAACGAGGAGCCAAGTTGATGTTCTTGATGATGGCTATCGTTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGAGCTATTACAAGTGTTCGAATGAAGGCTGCAAAGTGAAGAAGCAAATTCAAAGGCTAACAAATGATGAAGGAGTTGTATTGACAACGTATGAAGGAGTTCATTCCCATCCTATTGAAAAACCTCATGATTCCTTTCAAAATATCTTGACCCATATGCATATTTACCCTTCTTCTTCTTCCTTTTAA MDNSYKNFFPTSSSSFFHNSLAMDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSSSSF Homology
BLAST of Cucsat.G4820 vs. ExPASy Swiss-Prot
Match: Q9S763 (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.3e-39 Identity = 76/115 (66.09%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy Swiss-Prot
Match: Q9FYA2 (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36 Identity = 82/139 (58.99%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy Swiss-Prot
Match: Q9FFS3 (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26 Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy Swiss-Prot
Match: Q8VWQ4 (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.7e-26 Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.9e-25 Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Cucsat.G4820 vs. NCBI nr
Match: XP_004138624.3 (probable WRKY transcription factor 75 [Cucumis sativus]) HSP 1 Score: 301 bits (772), Expect = 4.11e-103 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cucsat.G4820 vs. NCBI nr
Match: KAE8652260.1 (hypothetical protein Csa_022307 [Cucumis sativus]) HSP 1 Score: 238 bits (608), Expect = 4.52e-77 Identity = 122/125 (97.60%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Cucsat.G4820 vs. NCBI nr
Match: TYK02720.1 (putative WRKY transcription factor 43 [Cucumis melo var. makuwa]) HSP 1 Score: 222 bits (566), Expect = 3.96e-72 Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Cucsat.G4820 vs. NCBI nr
Match: XP_038886504.1 (probable WRKY transcription factor 75 [Benincasa hispida]) HSP 1 Score: 214 bits (545), Expect = 1.48e-68 Identity = 119/156 (76.28%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of Cucsat.G4820 vs. NCBI nr
Match: XP_008454014.1 (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo] >TYK17014.1 putative WRKY transcription factor 48 [Cucumis melo var. makuwa]) HSP 1 Score: 176 bits (445), Expect = 2.09e-52 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy TrEMBL
Match: A0A0A0LT01 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406060 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 1.13e-86 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy TrEMBL
Match: A0A5D3BUB7 (Putative WRKY transcription factor 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00180 PE=4 SV=1) HSP 1 Score: 222 bits (566), Expect = 1.92e-72 Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy TrEMBL
Match: A0A5D3D1A5 (Putative WRKY transcription factor 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001590 PE=4 SV=1) HSP 1 Score: 176 bits (445), Expect = 1.01e-52 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy TrEMBL
Match: A0A1S3BYF2 (probable WRKY transcription factor 48 OS=Cucumis melo OX=3656 GN=LOC103494564 PE=4 SV=1) HSP 1 Score: 176 bits (445), Expect = 1.01e-52 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 0
BLAST of Cucsat.G4820 vs. ExPASy TrEMBL
Match: A0A2G9HPG3 (WRKY domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07920 PE=4 SV=1) HSP 1 Score: 174 bits (440), Expect = 1.54e-52 Identity = 80/107 (74.77%), Postives = 96/107 (89.72%), Query Frame = 0
BLAST of Cucsat.G4820 vs. TAIR 10
Match: AT3G01970.1 (WRKY DNA-binding protein 45 ) HSP 1 Score: 161.8 bits (408), Expect = 4.4e-40 Identity = 76/115 (66.09%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Cucsat.G4820 vs. TAIR 10
Match: AT5G13080.1 (WRKY DNA-binding protein 75 ) HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37 Identity = 82/139 (58.99%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of Cucsat.G4820 vs. TAIR 10
Match: AT5G41570.1 (WRKY DNA-binding protein 24 ) HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28 Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of Cucsat.G4820 vs. TAIR 10
Match: AT1G64000.1 (WRKY DNA-binding protein 56 ) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-27 Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of Cucsat.G4820 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 ) HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26 Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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