Cucsat.G4818 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAGATATATATATCACACACATACACACGTGTGTGTATGGTTAGCTATAAAAATGCGGCCTTTCTTGTGTTAGGGTTTATTTAACTGCCAATATTCGGCTTGAAATTTGTAAAGAAAAGAAATGGGAATGGAGGTTTGAAATTTGAAGAACAAGTTGTTCAATTAGGTATAAATTTTCTAATTTTGCTTTTGTTTTTCTTTTTTTCCTTTCTATTTACGTTTCTAGGAGGGTAATGCGTTGGAAAGAAGGGTGTTTTTGTAATGCTAAAATCATTTGTTTTCTTCTCTTTTTCTTTCAAAAGCATACATAATCATCATATACACATATATATTAAGTTTATCATATGTTTGATTATATGGTTCCATCTATAGTTTCTTTTAATTAATTCATGTTATGAATTAATTGAACTTCACATTGCTGATCTGGTTAGTATTTTTTATTTTTTAAATTAATGATTTTTCTATTTGCTATTGGAGTTTGGGGAAAAATGAGAGAGAGCAGTGGTTAATTCCATATATATATATATGTGTTATTCTTTGACATATTATTTTGCTTCAATTTACAAATTTTGATATTTATTTAATTAAAATTAAGCATAATTCCTCTAGCTATATTCTTAAAATGGTTAAAATTTAAAATTTCTTTTTAATTTTAAAATGTGACAATAAAAAATAAAAAAATTGATTTGATTTTTTAAAGAACATTGGTAAGAAATAAGAAAGCTGTTAATAGGCCTAATTTAAAAAAGTTAATACAAAATCATATTGTTGCCAATGCTAACACTATTTCTTATTTCTAAACAATATTAAAATTGAAGCTAAAAGAGCTTATAAAAAAAGAATTAATTAAATGAAAGATATAGTGAGTATAGAAACCAAAATTGGATTAAGAATTGAATGATTGATTAATTAATTTTAAATTTTAATTTATGGGGGTATTATTAATTTAGTGTGAAGAAAGCAGATCAGTTGCAATGGAAGAAGAGATGTGTCCGCCATTGTTGCCGTCGACTCTTTCTACAACAACTGAATTGTCAGCGGTGGAATATGAGGATTTCGGTCACCATTTCGCTTCAATGTATCATTCAATTTTCCCTCCATTGTTATCATCTTCCTCTCTTCCAAATTCTCTTTCGTTTACACCATCGCCCTCCTCCGCCGACGACGACCACAACAACCACTGCACCACCCCCGCCGCCACTTCCACCACTGACGACCTTCTTTTTCAGGCACGTCTTATTCTCGAAAACCGTCACCTCCATCACCGTCACGATCTCTGCCTCCGCCGCCTCCGTCAAGTCGCTGAAGACGCTGATTATCTACGGCAGGAGAATGCCCAGCTCCGATTGGCGAATGCCGAGCTAGTGAAGGTTATTTCGTCCAAGACAGCCGTTGACGATCTCGTTTCAATTCCGAATTCTCATCTCCGGACTCTGATTGGAGGCGGCCAAAGTGGGGATGAAATTGGTTATGATATGATTAGTCCGACGAGTGTGATTGGAAAATATAATGATCAGTTCGATGGGAGAAATAATCTCCGCCGGAACTCTCTTCCAAGGAGCATTTCCGTCCGCTCTGCCGCCGCAGCCTCCTCCGTTCAACTCAACATCAAATCGGTAGGCATATTGATTATTATTACTTTTTCACTTTTCTTTTTAATTGTGTTTTCCATTGTGAGCATATTGAATTAGCGCTGAATAATCATTTTGATTACAATTTTTGGTTTTTTAAAATATCTTTTTAGTTTTTAAAATCTTAAAAATAAAAAAAGTATGGACTATTTTTAAATATATTAAAATAAATTAAAATATTTACTAAATAAGTTAAGTAGATGATATATTTATAAATATTTTGAGAAATTTTTTCTCTTAAAATAATTTTTCAAAAATCAAATAATATGTTTGATAATGGACGTTGATTTTTTGTTTTTAAAAAATTTGAAATATGTTTGGATGATTTCTTAATTACGTATTTATATATATAAAAAATTGAACTCTTTTTGCAATATTTTTCATCTAAACATATTATTAATTGAAAAATTATTTTAAATTAAAAAGTTCTAATTTTTTTTGAAAATAGAACCAAATATTACAAGTTGTAAATTAGGATATTTTGCTATATTTTTATTCATTTTTCTACCTTTAAAAATAGTTAATATGTTAAAATTTTATATTTTCAAATTTTTATATTGATAAAACGATAAAAAGAAATATTTAAGTGTATAAACTGTTCAGATAAAATGGAAAATAAAAAAAACAACAAAAGTAAACCCTAAAATTTGAACAAAAAAATAAAGTATTTTTCTTGTTTCTAAAATTTCTTGACAATCTTACAAATATTTTTGAAAGTGAAAAAACAACAAAATCCAATTGAACACCAAATAAACTAAACATAATATATGGAAATATAACATTCTTAACACATCTCTCTAAATTCTTAAGTTCAACTAATGCAATATATATATTGAAACACATGTATCTAAGAGATATATAACTAAATTTTTTAAATTTCATATTTAATGTGCGTTAATACTCATACTCACAACAAAATTTCATACTCCCATTTTATATATATACAAAAAACTAAAAAATAAAAAATTGAAAGAAGAAAGTTAAAAGAATTATTAGAAACAAAATTGTTGAAAGTTAGAGTTGGTTATGGCAGCGTGGGGCGTGTACTCCGGTGAGCGATGGTGGGAGTAGAAAGAGAGAAGAGGAGGCAACGGAATTTGAGGTGTACAATCAAGGTACGACCAAAACAGAGCTCTGCAATAAATGGCAAGAGATCGGCGACTGCCCTTATGGGAACCATTGTCGATTCGCTCATGGACTGGAAGAGCTCCGACCTGTCATGAGACACCCACGTTACAAGACACAAATGTGTAGGATGGTACTCGCTGGTGAAAAGTGTCCTTATGGTCATCGGTGCCATTTTCGCCATTCTCTTAGTGAACAATAAAAGATGACTCACCACGAAAACAAACAGACAGAAAACCACTGGGAAACAATACGCAATAAAGATGAAACAAAGATATATATTAGAAGAAATAAAAGGAAAAAGAAGGGAAGTTATTTGGCTTTTGTGTAGTGTATATAATAATGGCCTTATATATATATATATATTTGTTGTTGTTATTATTATCATTATGATTATTTTGATTTATTTGTGGAATGATTTAAAAGGTTTATTTTCCCTCCTGGAAAATGAATATTGTATATGATAATTCCAAGTGTTGAATATTTACTGTTATAGCAGAAATAAAAGAGTTATTATATATATGGTAAAAGCTCTTGTTTGTTAATAGAAGGCCAGCTTTTTGAAATGTTTCTAAATTTGATTTATTTTTGTTTATGATGATGAATTGATAAATGTAAGTTTGTATAAGTTGTAACAATAATTAAAAAGTAGCAGGCATCCAAAAACTCATAATAAATAGATTTATAAGTGTGGACCAATCAGTTTGTTCAATGATTCATATCTAACACTCTCTTTCTAAGGTTTTTTCTTTTCTTTAGAGAAAAACTGTGGTTCTTTTAATTATATGATGATGTCTTTATTTCTTTTATTTTCACTTTATATTTTAAGGAAATAATCAGCTTGGGTATTAAGTAGAAAATTCAGTACTGTTTTTTAAGAACACAAAGGAGAGTGTGCTAGTGTTGTTTGTTTATAAGTTATATATGTAAAATACCCTTTGATCTTTGAAGGTATTCTTAGATTATATTCTGAAAATTTTAACTCTTTACCTTCAAACTTTCAATAGAATTAAATGACACTAAAACCTGTAAAACTTGAAAAGTAAACATAACATCATTTTTACAAAACACCAGAATCTATAAAGAAAACACTAGTATAGCAAGATGCACATGTGACCATAAAACAAATTAGAGTTTGATGGTTGGCCATTTGAGTGGTTTCCAGTCATGCTTCCTTCAATGCATCCTCACTTGCAAAGTCTGTAGAATAGGGTAAGTACATAATATACCCAGTAAGTAGCTTTCACATATGGTAGTGCCTCAAATGCACAATCATACATGCAACGTCCTGCAATGAAAACATATGGTTGGGATCCAAAACTTGTATTTGTCACAACAATGGGGCAGTTGATTACGCTTCCAACGGAAGCCCTAATAAGAAAACTTGGACTTAAGTGAAACTCAATCACCTGATGGTTAACGTGTCATGCAGCTAGTAGAGCTAGAGTCGCACATCCAACAACAACCATAACATAACTATAAGGGAACGAGGGAAGGTACAACCATACATACTCCATTCTAGCCCTAATATAAACATAACATAAGAGGTAATTAGGTCTAGAAGAGTGATATGTGTGGCTGACCTGCCTGTCCTGGAAGCATAACTACATAGACCTGCTTATAAAACTTGATTATAATTAATCATAAACATACATATGAAGCATGGGGTCCTCTATCAAGAAACATGTGTTTGAGTATGTCATGCAACATAACAATTAAGGATACAAATCATACAATAATGCAACATTTTAAAGGTACATTACCATAAGCCATGGAATAAAAGAGTGAGATTAAGCGGCTTTACCTCGATTGGGATCCTATTTTTTTTCCTAAGTATTCTTTATAGTTTGATCCTATATGTTCGATAAAAAACACTTATGATTAACACTAGTTTTGTGCAATTTGTCTAAATTAATAAAGGTTAATTTAGCATGTGAAGAATGAACATGTAGATTTAAGTAAAATGCATACAAATTAGAATTGTTATATTTGTATGACAGAATATTACTGTGTTTTTATGGTCTCAAATATAAAAGACACATGCTGTTGTTTGAGTTAAATTAATTGGATATTTTAGACAATTTATTTTAATTCAAATATTTACAATCAAAGAAAAGAAGAGTATAATATACTTAGCTTGAATATAGTCCTCAAGAAAACCCTTTTCTTTATATATATAAAATAATATACTATTGTTAAATATATATATATATATATCTCACTAATTTTCCCAAAATAACAATGACTATGTAATGGAATTCCTAAACACTAATTATGGAATGTACAGATATATTCTTAAGCCAAAGGAACCTAGAATTCAAACCAAGATTTGGCAACGGAAGACCCCAACATTCCTTTGTGTTCCTTGCAACCCTGCAATGATGAAAAATTATCTGTTGATTGACCATATAGAATTGTTTTTGGACTTACGATGTAAATCAATCTACAAAACTTAAGTTTCTTTTTGAATGAAAAGAAACCGTGCAAATTGAGAGAAAACAAGACAATATTCAAAAAGTAATATGGCAAAAAAATTGATCATTAGTAACAAATTAGAGCACACATTATATTGATAGATCAGAGGATAGCCATATTGGCAATAAAGATTGATAAGATTTTTGTAATTTTCATGTAAAATTGCTGAGTACAAGATATTGATTTCTTTGTGAAGACTAATAATGATTTTGGATGTGATTTAAATCATTTAGAGAAAAGAAAAAGAGTGATTGAAGTGATCATATGAAATTTAAAGTTTTTCTTAGTGAAAAAAAATGGAGTCTAATTAATAGCAAATTAGTCTAATACTGACGTATAAAAATTCAAATTAATACAAACAACTGAGTAAAATAATGGGGAAATTAGATGATAAGAACTCAAAACAAAAATAATTGAGAACATATAAAACTCTTACCTCTTCAATCAGTTCACAGAGACCTAATAAACCAATCACACAAAAGAAACAATAATGAGTTCATTCATTAAAAAATACACCCAAGGCTTAGAAAAGAAAGATTCAAAAGTTAGAAAGAAAAAATGTGGTGAACCAGAAGTAAAAGATTTGGTTCGGTAATTATTTCCTTTCTAAACACTAAGTCTAATTTTTTGTCAACTCTTACCATTTTTTACTTTTAGTGAAAGAGTTGGAATTCTTAATCAACTTTTAATAACAAAGATATTGATCACTTGAAAAATATTAGTAAAATGTAGATAACAAAGTGGTGTTTACGACTCTAAATTTTCAAAGCTTATAGTTATCAAACAAATTTAGAAGGAGACAAAAAGGTGATGACAGAAGTATAGAGAGCACAAAAGAGTGAGATGCGCCAGATATGCATTTCATCATCTGTGCCCTCTATCTTCTGTCAACAACATATAGCTATCACCGTATTGGCGTTCTTTTTTTCTTTAGTTCTGTTTTCAATCACAAACAACACCAAAAAAAAAAAAAAAAACCCTAAATGAGATAGAGAAAGATGAAGAAAATGGTTGAATTTGAAAGAGACGATGTATATGTGAAGAAAT ATGGAAGAAGAGATGTGTCCGCCATTGTTGCCGTCGACTCTTTCTACAACAACTGAATTGTCAGCGGTGGAATATGAGGATTTCGGTCACCATTTCGCTTCAATGTATCATTCAATTTTCCCTCCATTGTTATCATCTTCCTCTCTTCCAAATTCTCTTTCGTTTACACCATCGCCCTCCTCCGCCGACGACGACCACAACAACCACTGCACCACCCCCGCCGCCACTTCCACCACTGACGACCTTCTTTTTCAGGCACGTCTTATTCTCGAAAACCGTCACCTCCATCACCGTCACGATCTCTGCCTCCGCCGCCTCCGTCAAGTCGCTGAAGACGCTGATTATCTACGGCAGGAGAATGCCCAGCTCCGATTGGCGAATGCCGAGCTAGTGAAGGTTATTTCGTCCAAGACAGCCGTTGACGATCTCGTTTCAATTCCGAATTCTCATCTCCGGACTCTGATTGGAGGCGGCCAAAGTGGGGATGAAATTGGTTATGATATGATTAGTCCGACGAGTGTGATTGGAAAATATAATGATCAGTTCGATGGGAGAAATAATCTCCGCCGGAACTCTCTTCCAAGGAGCATTTCCGTCCGCTCTGCCGCCGCAGCCTCCTCCGTTCAACTCAACATCAAATCGCGTGGGGCGTGTACTCCGGTGAGCGATGGTGGGAGTAGAAAGAGAGAAGAGGAGGCAACGGAATTTGAGGTGTACAATCAAGGTACGACCAAAACAGAGCTCTGCAATAAATGGCAAGAGATCGGCGACTGCCCTTATGGGAACCATTGTCGATTCGCTCATGGACTGGAAGAGCTCCGACCTGTCATGAGACACCCACGTTACAAGACACAAATGTGTAGGATGGTACTCGCTGGTGAAAAGTGTCCTTATGGTCATCGGTGCCATTTTCGCCATTCTCTTAGTGAACAATAA MEEEMCPPLLPSTLSTTTELSAVEYEDFGHHFASMYHSIFPPLLSSSSLPNSLSFTPSPSSADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKYNDQFDGRNNLRRNSLPRSISVRSAAAASSVQLNIKSRGACTPVSDGGSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGEKCPYGHRCHFRHSLSEQ Homology
BLAST of Cucsat.G4818 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.8e-51 Identity = 134/320 (41.88%), Postives = 173/320 (54.06%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.6e-47 Identity = 120/285 (42.11%), Postives = 161/285 (56.49%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44 Identity = 120/290 (41.38%), Postives = 156/290 (53.79%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.0e-39 Identity = 112/304 (36.84%), Postives = 159/304 (52.30%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy Swiss-Prot
Match: Q10MN8 (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301500 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27 Identity = 95/277 (34.30%), Postives = 133/277 (48.01%), Query Frame = 0
BLAST of Cucsat.G4818 vs. NCBI nr
Match: XP_004138800.1 (zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >XP_011649940.1 zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >XP_031736506.1 zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KAE8652256.1 hypothetical protein Csa_021891 [Cucumis sativus]) HSP 1 Score: 625 bits (1613), Expect = 4.42e-226 Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0
BLAST of Cucsat.G4818 vs. NCBI nr
Match: XP_008441302.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo] >XP_008441303.1 PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo] >TYK02740.1 zinc finger CCCH domain-containing protein 14-like [Cucumis melo var. makuwa]) HSP 1 Score: 574 bits (1479), Expect = 1.27e-205 Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of Cucsat.G4818 vs. NCBI nr
Match: XP_038886155.1 (zinc finger CCCH domain-containing protein 14-like [Benincasa hispida]) HSP 1 Score: 500 bits (1287), Expect = 1.46e-176 Identity = 259/311 (83.28%), Postives = 280/311 (90.03%), Query Frame = 0
BLAST of Cucsat.G4818 vs. NCBI nr
Match: KAG7033379.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 410 bits (1053), Expect = 5.41e-141 Identity = 222/315 (70.48%), Postives = 253/315 (80.32%), Query Frame = 0
BLAST of Cucsat.G4818 vs. NCBI nr
Match: KAG6602692.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1046), Expect = 6.73e-140 Identity = 221/316 (69.94%), Postives = 253/316 (80.06%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy TrEMBL
Match: A0A0A0LQS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404980 PE=4 SV=1) HSP 1 Score: 625 bits (1613), Expect = 6.55e-226 Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy TrEMBL
Match: A0A1S3B3V9 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103485461 PE=4 SV=1) HSP 1 Score: 574 bits (1479), Expect = 6.14e-206 Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy TrEMBL
Match: A0A5D3BUE0 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00430 PE=4 SV=1) HSP 1 Score: 574 bits (1479), Expect = 6.14e-206 Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy TrEMBL
Match: A0A6J1GXH1 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111458383 PE=4 SV=1) HSP 1 Score: 406 bits (1043), Expect = 7.54e-140 Identity = 220/313 (70.29%), Postives = 251/313 (80.19%), Query Frame = 0
BLAST of Cucsat.G4818 vs. ExPASy TrEMBL
Match: A0A6J1JRY1 (zinc finger CCCH domain-containing protein 14-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487801 PE=4 SV=1) HSP 1 Score: 391 bits (1005), Expect = 4.37e-134 Identity = 218/321 (67.91%), Postives = 248/321 (77.26%), Query Frame = 0
BLAST of Cucsat.G4818 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 203.4 bits (516), Expect = 2.7e-52 Identity = 134/320 (41.88%), Postives = 173/320 (54.06%), Query Frame = 0
BLAST of Cucsat.G4818 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 191.0 bits (484), Expect = 1.4e-48 Identity = 120/284 (42.25%), Postives = 161/284 (56.69%), Query Frame = 0
BLAST of Cucsat.G4818 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48 Identity = 120/285 (42.11%), Postives = 161/285 (56.49%), Query Frame = 0
BLAST of Cucsat.G4818 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07 Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 0
BLAST of Cucsat.G4818 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 47.0 bits (110), Expect = 3.2e-05 Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|