Cucsat.G4439 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4439
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1173: 1393709 .. 1396000 (+)
RNA-Seq ExpressionCucsat.G4439
SyntenyCucsat.G4439
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TACACTACAAGAATTGCCCCCTCACACACAAGCGCAACACATTACCCATTCTCTTAAACGACGAGCATCTCTTCCTCTCACGACTGCTGTTCAACCGACGACAACGACGATTTCTCATCTCAAGCCACGACGACGAGGAGTTCTTATTGGTTTTCAACAACGACGGCGGCGATTTCTCTTCTCAAACGACAATTTCTCTTCTCAAATGACGATTTCTCATCTCTGTTGTCGTCTCTCTGCTCGTCGTTGCTATGTTCGTCAGATTGACTTGAGGAAGGTAGATGGGCAACTTCAAGCTATAACTTTCAGACATCGCTCCCTACCCTATTGATTGACAGTGGTTGAATCAGGAGCCGAAACCCACCCTCAAACGAAGATTTCTCATCTCTTTTTCGGTGATACCCTCCCTTTCACGACTGCCGTTCAATCGAAGACGACGATACTTTCATCTCATTCCATCGTCTCTCTGTCCGTCTTCACTTTCATCACACGATTTCCCAAGAATTTTCTATTTCCCGGCTTCAATCTCTCAGACTTGTGATCTCTTGGCTTCATCTGAACACCGTCGTTCACATGGGTTTTGCTTAGGGTTCTTCGTCCAGTTTTTTAGCTTTAAACAATGGGTTATTTTGATGTTTTGGCTTAAAAAATCCTTCCACATTTGTTCTTCATATTTTTCTTCATGCCCTAATCTCCAATTTTTGTTTATTACATTAATCCCTTTCATGTTTTGTTCTTAAAAAAAGTATTGAGGTTTTGTTTTCTTAATTGATTTCTTGCAGTTTTAATCCCTCACAGCAAAGGCTTCTCTTTCCATTGGCAAATCCTCCATTTGCTCGATGAAATTGAGATTGGAGATTTTCAACAAGAGGTAAATTTACACAATCTCTCTCTGTCTTTTATTACAGATTTCTCTCCCACATCCTACGACCTTTTTTTGTTGTTTTCACTTCCATATATTATTTTTGGGTGTTTTCTAATGCTCATATAATGTAACTTTTGTAGTCATCAGCATATTGTACAGTACAAAACTGCCTATTATTCATTTTGCCTTCCAGTGAGTAGCTTTTCCTTGCTCTACTTTAAGAAAGCAGTGTTTGTGAAGTGGTTGAAGAATTAGTAGCTTCTTGGTGGCTTGCATTATCCATTTTTGTAAAATACATTGTGTGAAGTTTTATTCTTCAGATCATTTCTTTAATAAAATACTCACTATTGTTTGTGAAAGATTTGACTGACAGTGTGCTATTTTTGTCATGATTGCAGGTGGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAAACATACTGCAGTTAAGGACATTCTTATTCAGATTGATGTTTATTTTCAAGTTCAGGTATATTACTTTCACTTGAATGGTTGATTAATGATTT

Coding sequence (CDS)

ACACTACAAGAATTGCCCCCTCACACACAAGCGCAACACATTACCCATTCTCTTAAACGACGAGCATCTCTTCCTCTCACGACTGCTGTTCAACCGACGACAACGACGATTTCTCATCTCAAGCCACGACGACGAGGAGTTCTTATTGGTTTTCAACAACGACGGCGGCGATTTCTCTTCTCAAACGACAATTTCTCTTCTCAAATGACGATTTCTCATCTCTGTTGTCGTCTCTCTGCTCGTCGTTGCTATGTTCGTCAGATTGACTTGAGGAAGGTAGATGGGCAACTTCAAGCTATAACTTTCAGACATCGCTCCCTACCCTATTGA

Protein sequence

TLQELPPHTQAQHITHSLKRRASLPLTTAVQPTTTTISHLKPRRRGVLIGFQQRRRRFLFSNDNFSSQMTISHLCCRLSARRCYVRQIDLRKVDGQLQAITFRHRSLPY
Homology
[Close]
BLAST of Cucsat.G4439 vs. NCBI nr
Match: KAE8648192.1 (hypothetical protein Csa_018386 [Cucumis sativus])

HSP 1 Score: 55.8 bits (133), Expect = 2.05e-07
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 68 MTISHLCCRLSARRCYVRQIDLRKV 92
          MTISHLCCRLSARRCYVRQIDLRKV
Sbjct: 1  MTISHLCCRLSARRCYVRQIDLRKV 25

The following BLAST results are available for this feature:
BLAST of Cucsat.G4439 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G4439 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648192.12.05e-07100.00hypothetical protein Csa_018386 [Cucumis sativus][more]
BLAST of Cucsat.G4439 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cucsat.G4439 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4439.T10Cucsat.G4439.T10mRNA
Cucsat.G4439.T8Cucsat.G4439.T8mRNA
Cucsat.G4439.T5Cucsat.G4439.T5mRNA