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Cucsat.G4390 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCCAACCTACCAACAAAATCAAATTCCAATTTTTGTATAAGTCCCCTCTCAAAAGGAAAACTCAATAGTGTCATTATATAGAATCTTTAATTTATAGTGTACTTTTTCTTTGGCTGAAATCAAACAAACTCTTGCCCAATCCTCAACTCCATGGCTCCCCAAAACACCTACAAACATTTACTGCCAGAAAGCATTGTGTTTCCCTAATAATACAAAATTTGGGTAAATATAGGTTCTACAAAGTTAATGTTGTAAGGAAGAGAGAAAACCCTCAAATTCATAAAGGATCCCATCCAATCGTGGCCTCTTGGTTTAAAGAGTAAATAGTGGTTCAATGAACGAGTTCTTTAGTCAAACATATTTGGAAGGGGTCTGACTGCCATAAAAGCATCAACCATCTGAAAAGGAAACAAAAGAACTATAAGTAAGCCATACCAACCAGCCTCGCACTTCAAATTTACAAACTTCCTCGTGCATTCCATATTTCAATGCTAAATAGTACTCTTGATAGGAACAGAGGACAGTATTTCGTTTTCTCTTTTGAAGTTCCAATTCTCAAGAGCATTGAACTTCTATTAATATATAACTTGGGCTTATTTATGCTTAAACGCATGCTGATTGTTGGTTTTCTTTATATTGCTTGTCAATTTGTACTTGTATCCTTAAAGTTTTGAAAGAAAATAACATTTACTTCTGTGCCAAAAAAGAGTAAGCATAATCTAGCAAGAAAAATAAAATAAATAAAACACCTTGATGTAGAAATGTCAACATTTGCAGCATTTGCTCCCCTGCACCTAGATTGTCTTCCTTAACAAAGCCGCTTGAGTTGCACACCTCAACACTTCTAGTGTGCACCTCGGGGCCTTACTTCGCCTACTTTTCTTAACAAAAGCTCTATTTTCTTAAACATTTCATCATATTTCTACACCATTTCTCTTCGTATGTGTGCCCGGAAAGATTACTAGCTTCCCCACTTATTCAAGTTCAAATTAAAATGCATGAAATTAAAATTTTGTGGTTAAACTTGATTCTCTCAATCAACAACCACGTACAAGTGTTAAAAGAAATGAGATTCATCAGGTATGTTTGTTTAAAACAAGAAACAGCATAATTGTTGGTTTTTCAAAAAAAAAAAAAGAAACAGAAGAAAAGAAATGAAATAACATAATGGTATCGACAATTATTATGGCCATCCCAAACATTAAAGATGATATACCGCTTGTGATAGACCCCAGTAGTAAAAGCGTACTCACGAAGGAATAAAATGGGGAGTGACTGAGAGTTAGTTGGTATTTCCATCTGTTGTGGGCCCGTAGGAATATTGTTTGTTAGGAAAGACGGAGTAGTCTGTTACTATTTTAATTTCTCTTTTAGTGTTTGCTTATATATGTGGCTAGAGGTGTTCCGGTTCAGTTTGGAGCTCAAACCAAACCCCAGACATGCGGTGCAGGATACTCCTGGAAGTTTGTTGCGGCAGATCAAATGAATATTTAGGCCACACATTATTTCAGGATACTCCTGGAAGTTTGTTGCGGCAGATCAAATGAATATTTAGGCCACACATTATTTCATCAGAGTTTGGCGAAAGACCAACAAAGATAGAAGTCATGGTTAAATGGGCAGCACCTAAGAATGTGAAGGAGTTGCAAGGTTTTTTTTGGGTCTAACAAGATACTCCTAGAAGTTTGTTGCAAATTACAGCTCTATCACATTACTGTTAGAATCCTTTCCTTATTTTCTAAATATTTTTATGGAAATATTTTCCTTATTTCCTAAATCTTTTCCTTTTTTTTATTCCCTTGTATATTCTATTTATTCTCCATTGTACCTACATTATCATTCATTAGAAAATAATAACTAACAATCATAGTTTTTCTCCCGGTACTCTGGTTTCCACGTAAATTGATGTGTGTTCTCTCTCCTTTCAATATTGTATCAAAGCGGAACAATGAACACACCCTAGAAACCCTGAAAAACGTAACCAATGATGGAAATCAAACAGAAGAGATAGCCACCAGTTTTAGTGTTGCTGTCGATGCTCGGATGAGTGTTACCATGGACGAATGGTTCAGGCGCCTACAGAAAACGTCCAAAAATAAATTATCGTCAGTTCTGCAATCATCTGCACTACCGAACAAGCCTCACACACCGCCACACACCTCCCATGTGCCACCGTCGGAGTTGAATGCGCCGGTTTTTCCTTCTCAGACGGCGTCAGCCCATCTATCCAACCATTTTCTTCATCCACGGCCTATAATGCTCCCCACGCCTCGATTTATATTCTGCCACCTAATTCTGACCGGCCACCACAGCTTCTGCCGTCAAATATGCATGTCCTGTCACCCACTAACCCGAGCTATCATCCTGATGTTAAAATCCTCAAATTCACTCAACATTTGAGGTTGGTGAATCTTCGGCACATTCCAACCCTAACATGCAAGCTTCCTCGAGAATAGCTTAACAACAACTGGAAGAACTTGAGGCTACCTTAGGGACGACATCCAATATTTTTGTGCCGATGTATTATGAGAATCCGGTAAACTCGTTCCCTAATTATCCTCTCCTTATGTGACTAATACAGTGGCTCAGTCTTTGGTGTATCATCTTTCAGGAAAAAAGTTGAATGGCAATAACTATTTCTCATGGTCTCAGTTGGTGAAGATGGTTCTTGAAGGACGACATAAATTTAGCTTTCTGACAGGGAAAATATCTTACCCCCACCAGGCGACCCACAGGAATGATACTGGAAGGCAAAGGACTCTATTCTTCCGTCCATATTGATCAATAGTATGGAACCACTGATTGGCAAGTCCTTACTGTTTGCTGCAACAGTCAAAGATACTTGGGACATAGCCCAGACACTTTACTCCAAACGTCAGAATGTCTCTTGCAGACACACGGAAGAAGCAAGTTCATGAATGCAAGCAAGGAACCATGAATGTCACATCCTTTTTTAATAAGCTTTCTCTTATGTGGCAGGAAATGGACCTATGCAGAGAACTAGTCTGACGTGATCTCACTGATGGTGTGCAGTACTCTAGAATTGGAGAGAATGATAGGATTTATGACTTTCTTGCTGATCTTAATCATAAGTTTGATGTAGTTCGACGGCGTATATTAGGCCAAAGATCGATTCCCTCCCTGATGAAAGTTTATTCTGAAATCCGCCTCAAGGAAGATCGCACAAGTGCTATGAATATTTCTGCAACTATTGACTTTGTTGCTTTTAGTACAAGGTCCTCTAACAGTGGCAGTGACAAGCATAATGGAAAACCAATTCCTGTCCGTGAACATTGCAAAAAAACAATGGCATACCAAAGAACAGTGTTGGAAGTTACATGGTCATCTCCCAGGAGGTAAGAAACGCCCTCCCAACGACAGACAAAACACGGGACGGGCGTATGTGAGTGCTCAACCTCCTCAAAAATTTGATACACATAGGAACCAAACTGATCCCAGCCCTGCTACTTTAGGTACCATTGTCCAATCAAGTATACCTCACTCCTTCGGTCTTATTAGTGTTAATGGAAAGAACCCCTAGATTCTAGATTTTGGCACCACAGATCATTTGACTGGGTCCTTTGAACATTTTGTGTCTTACATTCCTTGTTGACAACGAAACAATTAGAATTGCAAATGGCTCCTTAGTTCCCATTGCTGGAAAGGGGAAGATTTCTCCCTGTGCAGAGCTCTCCTTACATAATGTTTCGCATGTGCCCAAACTTTCTTATAATTTGCTTTTTATAAGCAAGATTACTCATGCAAAGCAATATTCTTAACTAATTTTGTCGCTTTTCAGAACTTGAGCTCGAGGAAGATGATTGGCACGGCCCGGCATAGTAGGGGACTGTACCTCCTTGATGACGATACCTCTTCTAGTAGCATTTCTAGGACTAGTCTCTTATCTTCCTGTTTCACTACTTTTGAACAAAACTGTATGTTGTGACATTTTTGTTTAGGTCACCCTATTTTCCAATATATGAAACATTTATTTCCACATCTCTTCTCTAAAATTGATGTGTCTACCTTATCTTGATGATGTATGTAGTCAGACTGGAAGTAGCCCGTTCCCTTATGCTTTCCATTTCCCTTCCTTCATACTTGTGGGAAAATGATATTCTTACACCAGCTCATTAAATCAATAGAATGTCTTCTTGTATTCTCCACCTTCAAACTCCTTCAAAATACTTCATGCCTTTCATCCCTCCCCAACTTCCTATTTATAACCAACCAACTACCAACAAATCTAATTACTTTTATACCTCTACCTTATATTAATCTAGGTATCTAACAGACCAATTTCCTGAGTTCCACCTTGAGGACAAGATGGCTCTTTGGGGGGTGGGTAATGATAAACCCCCGATAGTAAAAGTGTATGCACGAAGGGATAAAATGGGGAAGAAAAAAGGTGACAGAGAGTTGGTATTTCCATCTGTTGTGGGCCCTTAGGAGTGTTGTTTGTTAGGGTCAAGTAGTCTTTTTACTTTAATAATTTCTTTTTTAGTGTTTGCCTATATATGTGGCTAGTATTGTGAGGGGAGGGTATCTTTTTGGCTATTATGTTGTAAGAACTTCTCAATAGAGAATTTTGGAGAGATTGGGAAGCTCTCAAATCTTTTCCGACAGTTGATAAATAAAATTAAGGTCGAGGCCTATCATATTACAACAGACATGTTAGAGGATGAAGTACTCTGAATTAATATCTAATACTGACTTTAGACAAGCTGCTTGAGGATGGATTTGCATCACACTATCACATAAAGAACGAAACAAACTTACCTCATCTGTCACGGCAGCACGAGCTCTACGATGTCTTTCTACCATTTCAGTTAGT ATGTGTGTTCTCTCTCCTTTCAATATTGTATCAAAGCGGAACAATGAACACACCCTAGAAACCCTGAAAAACGTAACCAATGATGGAAATCAAACAGAAGAGATAGCCACCAGTTTTAGTGTTGCTGTCGATGCTCGGATGAGTGTTACCATGGACGAATGGTTCAGGCGCCTACAGAAAACGTCCAAAAATAAATTATCGTCAGTTCTGCAATCATCTGCACTACCGAACAAGCCTCACACACCGCCACACACCTCCCATGTGCCACCGTCGGAGTTGAATGCGCCGGTTTTTCCTTCTCAGACGGCGTCAGCCCATCTATCCAACCATTTTCTTCATCCACGGCCTATAATGCTCCCCACGCCTCGATTTATATTCTGCCACCTAATTCTGACCGGCCACCACAGCTTCTGCCGTCAAATATGCATGTCCTGTCACCCACTAACCCGAGCTATCATCCTGATGTTAAAATCCTCAAATTCACTCAACATTTGA MCVLSPFNIVSKRNNEHTLETLKNVTNDGNQTEEIATSFSVAVDARMSVTMDEWFRRLQKTSKNKLSSVLQSSALPNKPHTPPHTSHVPPSELNAPVFPSQTASAHLSNHFLHPRPIMLPTPRFIFCHLILTGHHSFCRQICMSCHPLTRAIILMLKSSNSLNI Homology
BLAST of Cucsat.G4390 vs. NCBI nr
Match: KAA0050638.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 2.38e-18 Identity = 58/110 (52.73%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Cucsat.G4390 vs. NCBI nr
Match: TYK07795.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 3.16e-18 Identity = 58/110 (52.73%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Cucsat.G4390 vs. NCBI nr
Match: KAA0041479.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK24353.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 4.08e-18 Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of Cucsat.G4390 vs. NCBI nr
Match: TYK27008.1 (uncharacterized protein E5676_scaffold901G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 4.37e-17 Identity = 47/83 (56.63%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Cucsat.G4390 vs. NCBI nr
Match: TYK26198.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 8.82e-13 Identity = 55/145 (37.93%), Postives = 67/145 (46.21%), Query Frame = 0
BLAST of Cucsat.G4390 vs. ExPASy TrEMBL
Match: A0A5A7U5T5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001050 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.15e-18 Identity = 58/110 (52.73%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Cucsat.G4390 vs. ExPASy TrEMBL
Match: A0A5D3C8I9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00870 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.53e-18 Identity = 58/110 (52.73%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Cucsat.G4390 vs. ExPASy TrEMBL
Match: A0A5A7TJD7 (UBN2_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001330 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.97e-18 Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of Cucsat.G4390 vs. ExPASy TrEMBL
Match: A0A5D3DU33 (Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00150 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.12e-17 Identity = 47/83 (56.63%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Cucsat.G4390 vs. ExPASy TrEMBL
Match: A0A5D3DRM9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001270 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.27e-13 Identity = 55/145 (37.93%), Postives = 67/145 (46.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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