Cucsat.G4313 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4313
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transcription factor BIM2
Location	ctg1170: 465996 .. 471162 (+)
RNA-Seq Expression	Cucsat.G4313
Synteny	Cucsat.G4313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGAAAGATAGATCGGCCTAAAACGAGAAAAGTCACGAGCAAAGCGTGAGGTTAGTTGAATGGGATTCTTCTGACGGATGCATCCCACTGAAACTCGCTCGTGTTCGGCAACAGACAAATCCGGCCGTCTAAAGCGCCCCCACGGCGGCTCCGTTCACCGTTAACTGCCTCTGTGCGGCGGAAGCTCTGCTGCTCAGCCATGGCTGTTACATCTTCCATTCCTTAACATCAAATCTCAGCCAAGTTCAACAACCTTCCCTTCTCTTCCCTACTCATTTCGTTCGGCATCCTCAAATAACACCGCACTTCGATTTTGTTGCTTGGCAGCGTCTTCGAATTGGGGCAATTCTGTAATTGTTCTGTTTCCGGAGCTGTACAAGGAGTTGAAGTCTCGGTACAGAAGGATTGGAGGCTTGGACTGGCCAACCTGAACAAAATCCAAGTATGAGAACGGGGAAAAGCAATCAGGAAGACGACGAGTACGATGAGGATGAGCTGGTTGGTAAAAGAGAGGGGCCTTCTTCTACTTCCAACGCTATTAGTAGCATCGGCAACAGCAAAGGTATCTTGTTTTTTTCACACATGCCTATTTCTTTCCCTACTAGATCCATTTTTTTTTTAATTTCTGATGCCGTGGGATATCATAAGGACATGCTTATTGTTTGCCCTTCTTATTTCGTTGTTTATTTATTATGCTGCTACCTTGTGTTCTGGTTTCGATTCTGTTCTCAGCTGTGAATTTCAGTTGACCATTTTGTGTATCTAAATTTTATCCTTTGATCGTATCGATGAAACTCTAACGGGTAAATCAATTCGGAATCTTCTGATTCTAGCATCTGTTGTTTAGAACCATGATATTAGGGAAGCTTCGCCTCAAGGGATCGGTTTATTTTATTTAAATTATTTATTGATTTTAACTGAACTGAACTTGGGACCAGATGCGAAGAACAACGATAAGGCTAATGCCATACGGTCGAAGCACTCTGTGACAGAGCAGCGCAGAAGAAGCAAGATAAATGAGAGGTAATGCCCACAAAAAATCACTGAGGAGTTCAAAATTGTTAGAGAGATAATTGTGATTACATCTTGCAGGTTTATTTGTTTTACTGCTTGTGATTCATGCTGCATGATGATTTTCTCTCTGTGGTTATTAACATATTGTAGAGAATATGGAATCTATGATCCGAGGATTTTCCTTTACAACTGGAGTTGTACTTGCTTTATGGGTTTCAGTTTTCTTAAGCCTTAAAGGAACCATCCTGCCCTACGCCTGACCGTTGCAATTAAATTTCTGTCTTACTTCTGTCAATATTAAATGTACATCCTCTGATCAGCCGCTATCTCATTTCAGATTCCAGATTTTGAGAGATCTTATACCTCATAGTGATCAAAAAGAGAGACACTGCCTCGTTTTTTATTGGAGGTATACAGTCGCTTATTGAAAATGAGACATTGTTGAAGCTGTAAAGTATCTACTTCTTCTTGTGCTACTCAGTAAAGTTTTTTTTTATCTTCCATTGAGTAAAATTAGTCTTTTGTTGCAGGTGATTGAGTATGTTCAGTATTTACAGGAGAAGGTGCAGAAGTACGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGCTAATACCATGGGTAAATACCATATGCTCTTCCTTTATTTTGTTTAGGAGTTATCATTCACTAACTTGGTTGTCCGCTTTATTTGTCTAATAAGATTGCATAAGATTAGATGTGTTATTAGTCGGTGTGATAACATGGGCACTGTGTCCCTCATATCTTTAATTGTGGAACTACCTGTAAATCACTTTTTTCTCTCTGTCACTTTATATTTCATATGACCCGTTCTGTTTCTATTCTGTTCCTGATAGAAATTATGTTAGTTTCCAGTGTTGAGCTGGGCACAAGGCACACCCACTAGACTGTAAATGAAGGTGGGAAATGGAAGAAAAATGTTGTTTTGGGATGATTCATTGGTAGATGATTATTCTCTGTAAAGCACATTCTCAGCTCATAGAATACGGACTAAGTTGGTTGTGAGGACTTTGGGGATGAATATCCCAGTGGAGAGTTGCCAAAGAAGTCTGGAAGAGGAAATTAATTATCTTAGTCTTGGTAAAAACTATCTACGCCCAATGACCAGAGATGCTGAAGATGTAAAGGTTTGGACTGTGTGCCAATCTGGAACTTTCTCAACCAAAACTTTATTTGTTAAGCCTACAGATTTAGAGTTTTATCTTGATAAGATTGTAATTAAGTTGGTGTCGAAGGGAAGAATCTAGAAGAAAACTAAAACTTTCCCATGGACTGCCTAAGTCAAAATTTGAAGTTCAAACCATTAAAATGTTTCCTGTGGGGGTTGTTTGGTGGGGTGGGGGAATTAGTGAAGGTGATGACCCCACCGGATAATTTCTTTGACTAGGTTATTGTCTACAAGAAAAAGAATGGGATTTATCCATATGTGCTTTCCACTGCAATAATGGAGTTAGATAGTATGTTAAATTTTCCTTCACCTACTAGCTTAAGCTTTTAGATTAAATTGGTGATTTAAGATGGTATCAGAGCAGGTGGTTTAGGGAGGTCTTGTGCCTAAGTCCCTACAACGTTATTTTCTCTCCCTTTAATATTAATTTCCACTTGTTGGGTCGTTCTTGATATTTTAGGCCCACAAGTGAGGGCTTGATATTTTAAGCCCACAAGTGTGGAGGAGCGTTAGATATTAATTTACGATAAAAGAATATTTGAATGTATTATATGGCATCATTTAATCTACAATGGGTTTTCATGTCTCTATTAGACAGAATATCCCATCATTACTGTACGGGTGTGGTTTCAGTTGGAAGACACAGATGGATAGGGTCAACCTATCTCCAGTTATGTGGGAGCTGTGGTTGCAAAGATATCATAGGATGTTTAGCGGTGAGGCCTTTTGGTAGACATCAAGGTGGTAGGATACAGAAGTCTACATTTAATGTTTCTCACTAACTTTTATTAGAGAAATAGAAATACTTTATACCCCATTTAATTCAATCTGGAGAACCTTGTCATAAACTTCTAATCGGCTGAACCAGAAATTTGTTATCTCATTAACTTCCAGAGAAAAAGAAGTTTGGGTACAGCAACAGCATAATTCAAGAAGACAACAAGAAGGTGCAAGAAACCTTCAACCACCTCCCAAACAACCAATTCCAAATTATTACAGAGAAGAGGAACAACGTTTTCATCAAAGACCCATTCAAGAATTGACAAGATGGCCGCAAGAAATACCAAGAACTCCCGCAGTGACTAAACAAAGCAACTGGAAACCTATACAACCATGTAATGCTACAACAGGGGAATTCAGGGCTCCCTAACTAACACTAAGATCTTAATAATCTGTGTGTGTGTGTTTCCCCCCTTTTTTTCATTTTAGGTATTAATATTTGTTTCTATTCTATGGTTTGAGTCAGACATTTACATGCAAGTTAATAAATTTTAACCAATTGCTCGATTATGTTCTTACCTTTTTTTTCACCTTATTTGCATGCATTGGAGAATAGGGGATTCTTGACTCTTATAGGATTTGATATTTCCTTGATTCAGGAATTTTGTTCTGCTCATTTTCTCTATTTAGTATTCTAAACTTTACTGTGTCGTGCAGAGGAACAGTCATTGGCGCATGCAGACTTTTGTTGGGCATCAACAATCTGTAAAAAATGGTTCTGCTTCAGGACCAACTTATTCTGGGAAGTTTGATGACAACAACATTTCTATTTCACCAGCCATGCTTGCAAGCTCACAAAATCCTCTCGACTCCCACTCTGGCAGAGATATTCTACAGGAAGCAGACATAACAAATAAAGTTCCACATCCTATGTCTCTGGAAGGAAATATGCATGCTTCTATTCGTAGCGACACTGTTCTTGATCACTCTCTCCACATCCCAATTTCTGATCCACAGGCAACAGAGTGTCCCATCACCAACAATGCATCAAACCAACCAGAAGAGATGGGTATTGAAGGGGGGACAATAAGCGTTTCAAGTGTTTATTCAGAAGGGTTAGTTGTAAGATATTTATACTGATTTTGTTTCAAGTATTTTGGTAGGTTAAGGAGATTCCATGAGCAGAAGGTTTTATTCTTCTTCCTATTTTATAAATATAGTAACTCCAATGATTTAAACTTCAGTAGAGCTTGTTTAAAGCACAGCATATATAGGATTTGGCATAGTTTCTTTTGTAGGCGTTCATTTGCATGGTCTCTTCCTAGGATTTGGTAACAGCTTTGGACCTTGGTGCCGAGCAGGTTTATGAACAGCTTGGCTCAAGCTTTGCAGAGTACTGGACTGGATTTGTCACAAGCTAGCATCTCTGTTCAGATTGATCTGGGCAAGAGAGCAAATAAGGGGATGCCATTTGGAACGCCTATTTTTAAGGTATGAAGTTGAAATCTCAGTTCTTACTTTTCTGGTATGGTTCGATAAGGCAGAATATATAGAATATATACTTCCGTGAGTGTTTGGGTGCTTACACGCCACTCCAACTAATTCAAGAAACAACTTGTTTATCCTTAACATTTGGGTGTCAAAAAACTTTGTGATCATTGTTGCATCTTAGTCCTTGTTCACTAATTATAGTAGAAGCAAGCAAAAGGTTAGAGATCACAATAATAACTTTAAATGAAGGAAAAATAAACTAGAAATTCAATCTGAGAACCTTATAACATCACCAAATGTTTAGTCTTTTACAATGTCTTAAGCTGTTCAATTTCTGATCAGGAAACTGGAAATCCTTCCTCCAACCACCCAGCAATGGCAAATGTAGGGGACCTGGGCAGCGGAGATGACTCAGAACAAGCAAAAAAGCGGCTAAGGACATGATAATCTGCACCACGAGTCCCCGGTTATTTCTGTTGTGCGATTACTGTTTCTAATGTGAATTAGAATGTGATGCTTATTGTACAGATTCACTTTTTCTTCTTCTTTTAATCTTCTTCCTTGACCTTTTATACAATTTCTTCAAACTCGTATTGCTATGAGTTAGAACATCAGTGTTAGGAAATCCAAAGTTAAAATTTGGTATTCACTACTCAAATGTTAGATTCTCCACTCTCCATTGCTCTTATGTTTGTAGTTGTAATTACAATATTAAAATGTGAACCTCCCAGAAAGAGCTTTAAAAAGGAGATATTATTTCGGTTCTCTCTACTTATTTCCCCCTTTTCTATTTTACATTTTACATTCATTTTTTTAAGGACAACGTGCAA

Coding sequence (CDS)

ATGCAGACTTTTGTTGGGCATCAACAATCTGTAAAAAATGGTTCTGCTTCAGGACCAACTTATTCTGGGAAGTTTGATGACAACAACATTTCTATTTCACCAGCCATGCTTGCAAGCTCACAAAATCCTCTCGACTCCCACTCTGGCAGAGATATTCTACAGGAAGCAGACATAACAAATAAAGTTCCACATCCTATGTCTCTGGAAGGAAATATGCATGCTTCTATTCGTAGCGACACTGTTCTTGATCACTCTCTCCACATCCCAATTTCTGATCCACAGGCAACAGAGTGTCCCATCACCAACAATGCATCAAACCAACCAGAAGAGATGGGTATTGAAGGGGGGACAATAAGCGTTTCAAGTGTTTATTCAGAAGGGTTAGTTGTAAGATATTTATACTGA

Protein sequence

MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVYSEGLVVRYLY

Homology

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BLAST of Cucsat.G4313 vs. ExPASy Swiss-Prot
Match: Q9CAA4 (Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-25
Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           +Q+   H  ++ NGS  G  + GKF+DN ++ +PA++A  Q P++S   R I        
Sbjct: 126 VQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAIT------- 185

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
                +S+E       +    L   L + +   QA ECP T++   Q  ++ IEGGTIS+
Sbjct: 186 ----GISIESQPELDDKGLPPLQPILPM-VQGEQANECPATSDGLGQSNDLVIEGGTISI 245

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SS YS   ++SL QALQ+ G+DLSQA +SVQIDLGKRAN+G+    P  K   NP S   
Sbjct: 246 SSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSK---NPLSYD- 305

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 204
                 D    ++SE + KR++T
Sbjct: 306 --TQGRDSSVEEESEHSHKRMKT 310

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BLAST of Cucsat.G4313 vs. ExPASy Swiss-Prot
Match: Q9LEZ3 (Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 7   HQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPM 66
           +QQ V  G A  P    K ++   +I  ++LA++Q  +  H               P P+
Sbjct: 355 NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDH--------PTTATTSPFPL 414

Query: 67  SLEGNMHAS--IRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVY 126
           S++ N   S  I  + V     H  ++  +A E   ++ +  + E+  +  G I +SSVY
Sbjct: 415 SIQSNSFFSPVIAGNPV--PQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVY 474

Query: 127 SEGFMNSLAQALQSTGLDLSQASISVQIDLGKRAN 160
           S+G + +L +AL+++G+DL++ASISV+I+L K+++
Sbjct: 475 SQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495

[Close]

BLAST of Cucsat.G4313 vs. NCBI nr
Match: XP_011657414.1 (transcription factor BIM2 [Cucumis sativus] >XP_031743829.1 transcription factor BIM2 [Cucumis sativus] >KGN47675.1 hypothetical protein Csa_018291 [Cucumis sativus])

HSP 1 Score: 399 bits (1025), Expect = 4.51e-138
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN
Sbjct: 130 MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV
Sbjct: 190 KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 250 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 309

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 310 AMANVGDLGSGDDSEQAKKRLRT 332

[Close]

BLAST of Cucsat.G4313 vs. NCBI nr
Match: KAA0064784.1 (transcription factor BIM2 [Cucumis melo var. makuwa])

HSP 1 Score: 382 bits (980), Expect = 1.51e-132
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPA+LASSQNPLDSHSGRDILQEADITN
Sbjct: 45  MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAILASSQNPLDSHSGRDILQEADITN 104

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSD  LD SLHIPISD QATECPITNNASNQPEEMGIEGGTISV
Sbjct: 105 KVPHPMSLEGNMHASIRSD--LDQSLHIPISDAQATECPITNNASNQPEEMGIEGGTISV 164

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLS+ASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 165 SSVYSEGFMNSLAQALQSTGLDLSEASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 224

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 225 AMANVGDLGSGDDSEQAKKRLRT 245

[Close]

BLAST of Cucsat.G4313 vs. NCBI nr
Match: XP_038886108.1 (transcription factor BIM2 isoform X1 [Benincasa hispida])

HSP 1 Score: 382 bits (980), Expect = 3.18e-131
Identity = 195/203 (96.06%), Postives = 197/203 (97.04%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGH QSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQ+ADITN
Sbjct: 130 MQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQDADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSDTVLD SLHIPISD Q TECPITNNASNQPEEM IEGGTISV
Sbjct: 190 KVPHPMSLEGNMHASIRSDTVLDQSLHIPISDAQTTECPITNNASNQPEEMAIEGGTISV 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNP S+HP
Sbjct: 250 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPPSSHP 309

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 310 AMANVGDLGSGDDSEQAKKRLRT 332

[Close]

BLAST of Cucsat.G4313 vs. NCBI nr
Match: XP_008445413.1 (PREDICTED: LOW QUALITY PROTEIN: transcription factor BIM2 [Cucumis melo])

HSP 1 Score: 380 bits (976), Expect = 1.20e-130
Identity = 196/203 (96.55%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPA+LASSQNPL+SHSGRDILQEADITN
Sbjct: 130 MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAILASSQNPLESHSGRDILQEADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSD  LD SLHIPISD QATECPITNNASNQPEEMGIEGGTISV
Sbjct: 190 KVPHPMSLEGNMHASIRSD--LDQSLHIPISDAQATECPITNNASNQPEEMGIEGGTISV 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLS+ASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 250 SSVYSEGFMNSLAQALQSTGLDLSEASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 309

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 310 AMANVGDLGSGDDSEQAKKRLRT 330

[Close]

BLAST of Cucsat.G4313 vs. NCBI nr
Match: KAG6598649.1 (Transcription factor BIM2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346 bits (887), Expect = 4.56e-117
Identity = 176/204 (86.27%), Postives = 190/204 (93.14%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGH QSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRD+LQ+ADITN
Sbjct: 130 MQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVP PMSLEGN+HASIRSD VLD SL IPIS  QATECPI NNAS+QPEEM IEGGTIS+
Sbjct: 190 KVPLPMSLEGNIHASIRSDGVLDQSLQIPISGGQATECPIANNASSQPEEMAIEGGTISI 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSN-H 180
           SS+YSEG +NSL QALQ+TGLDLSQAS+S+Q+DLGKRANKG+PFG PIFKETGNPSS+ H
Sbjct: 250 SSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGLPFGMPIFKETGNPSSSGH 309

Query: 181 PAMANVGDLGSGDDSEQAKKRLRT 203
           PAMA+VGDLGSGDDSEQ KKRLRT
Sbjct: 310 PAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL
Match: A0A0A0KD98 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G373190 PE=4 SV=1)

HSP 1 Score: 399 bits (1025), Expect = 2.19e-138
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN
Sbjct: 130 MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV
Sbjct: 190 KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 250 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 309

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 310 AMANVGDLGSGDDSEQAKKRLRT 332

[Close]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL
Match: A0A5A7VBZ5 (Transcription factor BIM2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00910 PE=4 SV=1)

HSP 1 Score: 382 bits (980), Expect = 7.31e-133
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPA+LASSQNPLDSHSGRDILQEADITN
Sbjct: 45  MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAILASSQNPLDSHSGRDILQEADITN 104

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSD  LD SLHIPISD QATECPITNNASNQPEEMGIEGGTISV
Sbjct: 105 KVPHPMSLEGNMHASIRSD--LDQSLHIPISDAQATECPITNNASNQPEEMGIEGGTISV 164

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLS+ASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 165 SSVYSEGFMNSLAQALQSTGLDLSEASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 224

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 225 AMANVGDLGSGDDSEQAKKRLRT 245

[Close]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL
Match: A0A1S3BCN3 (LOW QUALITY PROTEIN: transcription factor BIM2 OS=Cucumis melo OX=3656 GN=LOC103488447 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 5.83e-131
Identity = 196/203 (96.55%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPA+LASSQNPL+SHSGRDILQEADITN
Sbjct: 130 MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAILASSQNPLESHSGRDILQEADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVPHPMSLEGNMHASIRSD  LD SLHIPISD QATECPITNNASNQPEEMGIEGGTISV
Sbjct: 190 KVPHPMSLEGNMHASIRSD--LDQSLHIPISDAQATECPITNNASNQPEEMGIEGGTISV 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SSVYSEGFMNSLAQALQSTGLDLS+ASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP
Sbjct: 250 SSVYSEGFMNSLAQALQSTGLDLSEASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 309

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 203
           AMANVGDLGSGDDSEQAKKRLRT
Sbjct: 310 AMANVGDLGSGDDSEQAKKRLRT 330

[Close]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL
Match: A0A6J1K6W4 (transcription factor BIM2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492183 PE=4 SV=1)

HSP 1 Score: 345 bits (886), Expect = 3.13e-117
Identity = 176/204 (86.27%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGH QSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRD+LQ+ADITN
Sbjct: 130 MQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVP PMSLEGN+HASIRSD VLD SL IPIS  QATECPI NNAS+QPEEM IEGGTIS+
Sbjct: 190 KVPLPMSLEGNIHASIRSDGVLDQSLQIPISSGQATECPIANNASSQPEEMAIEGGTISI 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSN-H 180
           SS+YSEG +NSL QALQ+TGLDLSQAS+S+Q+DLGKRANKG PFG PIFKETGNPSS+ H
Sbjct: 250 SSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGFPFGMPIFKETGNPSSSGH 309

Query: 181 PAMANVGDLGSGDDSEQAKKRLRT 203
           PAMA+VGDLGSGDDSEQ KKRLRT
Sbjct: 310 PAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL
Match: A0A6J1HCP5 (transcription factor BIM2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462422 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 8.95e-117
Identity = 176/204 (86.27%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           MQTFVGH QSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRD+LQ+ADITN
Sbjct: 130 MQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDADITN 189

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
           KVP PMSLEGN+HASIRSD VLD SL IPIS  QATECPI NNAS+QPEEM IEGGTIS+
Sbjct: 190 KVPLPMSLEGNIHASIRSDGVLDQSLQIPISGGQATECPIANNASSQPEEMAIEGGTISI 249

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSN-H 180
           SS+YSEG +NSL QALQ+TGLDLSQAS+S+Q+DLGKRANKG PFG PIFKETGNPSS+ H
Sbjct: 250 SSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGPPFGMPIFKETGNPSSSGH 309

Query: 181 PAMANVGDLGSGDDSEQAKKRLRT 203
           PAMA+VGDLGSGDDSEQ KKRLRT
Sbjct: 310 PAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of Cucsat.G4313 vs. TAIR 10
Match: AT1G69010.1 (BES1-interacting Myc-like protein 2 )

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26
Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 1   MQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITN 60
           +Q+   H  ++ NGS  G  + GKF+DN ++ +PA++A  Q P++S   R I        
Sbjct: 126 VQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAIT------- 185

Query: 61  KVPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISV 120
                +S+E       +    L   L + +   QA ECP T++   Q  ++ IEGGTIS+
Sbjct: 186 ----GISIESQPELDDKGLPPLQPILPM-VQGEQANECPATSDGLGQSNDLVIEGGTISI 245

Query: 121 SSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPSSNHP 180
           SS YS   ++SL QALQ+ G+DLSQA +SVQIDLGKRAN+G+    P  K   NP S   
Sbjct: 246 SSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSK---NPLSYD- 305

Query: 181 AMANVGDLGSGDDSEQAKKRLRT 204
                 D    ++SE + KR++T
Sbjct: 306 --TQGRDSSVEEESEHSHKRMKT 310

[Close]

BLAST of Cucsat.G4313 vs. TAIR 10
Match: AT5G08130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 7   HQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPM 66
           +QQ V  G A  P    K ++   +I  ++LA++Q  +  H               P P+
Sbjct: 235 NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDH--------PTTATTSPFPL 294

Query: 67  SLEGNMHAS--IRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVY 126
           S++ N   S  I  + V     H  ++  +A E   ++ +  + E+  +  G I +SSVY
Sbjct: 295 SIQSNSFFSPVIAGNPV--PQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVY 354

Query: 127 SEGFMNSLAQALQSTGLDLSQASISVQIDLGKRAN 160
           S+G + +L +AL+++G+DL++ASISV+I+L K+++
Sbjct: 355 SQGLVKTLREALENSGVDLTKASISVEIELAKQSS 375

[Close]

BLAST of Cucsat.G4313 vs. TAIR 10
Match: AT5G08130.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 7   HQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPM 66
           +QQ V  G A  P    K ++   +I  ++LA++Q  +  H               P P+
Sbjct: 355 NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDH--------PTTATTSPFPL 414

Query: 67  SLEGNMHAS--IRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVY 126
           S++ N   S  I  + V     H  ++  +A E   ++ +  + E+  +  G I +SSVY
Sbjct: 415 SIQSNSFFSPVIAGNPV--PQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVY 474

Query: 127 SEGFMNSLAQALQSTGLDLSQASISVQIDLGKRAN 160
           S+G + +L +AL+++G+DL++ASISV+I+L K+++
Sbjct: 475 SQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495

[Close]

BLAST of Cucsat.G4313 vs. TAIR 10
Match: AT5G08130.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 7   HQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPM 66
           +QQ V  G A  P    K ++   +I  ++LA++Q  +  H               P P+
Sbjct: 234 NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDH--------PTTATTSPFPL 293

Query: 67  SLEGNMHAS--IRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVY 126
           S++ N   S  I  + V     H  ++  +A E   ++ +  + E+  +  G I +SSVY
Sbjct: 294 SIQSNSFFSPVIAGNPV--PQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVY 353

Query: 127 SEGFMNSLAQALQSTGLDLSQASISVQIDLGKRAN 160
           S+G + +L +AL+++G+DL++ASISV+I+L K+++
Sbjct: 354 SQGLVKTLREALENSGVDLTKASISVEIELAKQSS 374

[Close]

BLAST of Cucsat.G4313 vs. TAIR 10
Match: AT5G08130.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 7   HQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEADITNKVPHPM 66
           +QQ V  G A  P    K ++   +I  ++LA++Q  +  H               P P+
Sbjct: 355 NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDH--------PTTATTSPFPL 414

Query: 67  SLEGNMHAS--IRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGGTISVSSVY 126
           S++ N   S  I  + V     H  ++  +A E   ++ +  + E+  +  G I +SSVY
Sbjct: 415 SIQSNSFFSPVIAGNPV--PQFHARVASSEAVEPSPSSRSQKEEEDEEVLEGNIRISSVY 474

Query: 127 SEGFMNSLAQALQSTGLDLSQASISVQIDLGKRAN 160
           S+G + +L +AL+++G+DL++ASISV+I+L K+++
Sbjct: 475 SQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495

The following BLAST results are available for this feature:

BLAST of Cucsat.G4313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAA4	6.8e-25	37.44	Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1	[more]
Q9LEZ3	1.5e-08	29.03	Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2	[more]

BLAST of Cucsat.G4313 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657414.1	4.51e-138	100.00	transcription factor BIM2 [Cucumis sativus] >XP_031743829.1 transcription factor...	[more]
KAA0064784.1	1.51e-132	97.04	transcription factor BIM2 [Cucumis melo var. makuwa]	[more]
XP_038886108.1	3.18e-131	96.06	transcription factor BIM2 isoform X1 [Benincasa hispida]	[more]
XP_008445413.1	1.20e-130	96.55	PREDICTED: LOW QUALITY PROTEIN: transcription factor BIM2 [Cucumis melo]	[more]
KAG6598649.1	4.56e-117	86.27	Transcription factor BIM2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G4313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD98	2.19e-138	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G373190 PE=4 S...	[more]
A0A5A7VBZ5	7.31e-133	97.04	Transcription factor BIM2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BCN3	5.83e-131	96.55	LOW QUALITY PROTEIN: transcription factor BIM2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1K6W4	3.13e-117	86.27	transcription factor BIM2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492183...	[more]
A0A6J1HCP5	8.95e-117	86.27	transcription factor BIM2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114624...	[more]

BLAST of Cucsat.G4313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69010.1	4.8e-26	37.44	BES1-interacting Myc-like protein 2	[more]
AT5G08130.1	1.1e-09	29.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.2	1.1e-09	29.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.3	1.1e-09	29.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.4	1.1e-09	29.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR46412:SF6	TRANSCRIPTION FACTOR BIM2	coord: 1..127
IPR044295	Transcription factor BIM1/2/3	PANTHER	PTHR46412	BES1-INTERACTING MYC-LIKE PROTEIN	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4313.T1	Cucsat.G4313.T1	mRNA
Cucsat.G4313.T2	Cucsat.G4313.T2	mRNA
Cucsat.G4313.T5	Cucsat.G4313.T5	mRNA
Cucsat.G4313.T6	Cucsat.G4313.T6	mRNA
Cucsat.G4313.T7	Cucsat.G4313.T7	mRNA
Cucsat.G4313.T8	Cucsat.G4313.T8	mRNA
Cucsat.G4313.T9	Cucsat.G4313.T9	mRNA
Cucsat.G4313.T10	Cucsat.G4313.T10	mRNA
Cucsat.G4313.T3	Cucsat.G4313.T3	mRNA
Cucsat.G4313.T15	Cucsat.G4313.T15	mRNA
Cucsat.G4313.T14	Cucsat.G4313.T14	mRNA
Cucsat.G4313.T4	Cucsat.G4313.T4	mRNA
Cucsat.G4313.T11	Cucsat.G4313.T11	mRNA
Cucsat.G4313.T13	Cucsat.G4313.T13	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity