Cucsat.G4304 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4304
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Beta-galactosidase
Location	ctg1170: 136659 .. 137219 (+)
RNA-Seq Expression	Cucsat.G4304
Synteny	Cucsat.G4304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAATCACATTATCCTTTAGTAGCTTCGTGGATGGGTGCAAAGAAACAAAAGGTAAGAAGAGTGAAGAACAGAACCAGAAGGCCTAAGGTCCAATTAAGCTGCCCTAGTAAAAAGAAAATCTCCAACATCTTATTTGCAAGCTTTGGTACCCCATCTGGTGATTGTCAAAGCTATGCTATTGGACTGTGTCACTCGCCAAACTCCAGAGCCATTGTAGAACATGTGAGTTTTTTCCTGAAACACATTAGCATTCTATAAAGAAAGTGGTATCTTGCATTAAATTAAAGGCAATCAAGACAATAGCTCACATGAAAATTGCATTGTGATGTTTCAGGCATGTCTAGGGAGGGCCAAATGCTCGATTCCAATCTCAAATCTGAACTTTCGAGGCGATCCATGTCCACATGTCACGAAAACATTGTTGGTCGATGCACAATGCACATAAATGATCAAATACGCCTAGCATGAAGTAGATGGCATGATAATTCACAGTAGCTTTCAATATATAAATAGCTTTAGCAATAATCTTCTCCCTTACCACAGCTTATTTCATTCTTTT

Coding sequence (CDS)

GAATCACATTATCCTTTAGTAGCTTCGTGGATGGGTGCAAAGAAACAAAAGGTAAGAAGAGTGAAGAACAGAACCAGAAGGCCTAAGGTCCAATTAAGCTGCCCTAGTAAAAAGAAAATCTCCAACATCTTATTTGCAAGCTTTGGTACCCCATCTGGTGATTGTCAAAGCTATGCTATTGGACTGTGTCACTCGCCAAACTCCAGAGCCATTGTAGAACATGCATGTCTAGGGAGGGCCAAATGCTCGATTCCAATCTCAAATCTGAACTTTCGAGGCGATCCATGTCCACATGTCACGAAAACATTGTTGGTCGATGCACAATGCACATAA

Protein sequence

ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT

Homology

[Close]

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot
Match: Q8GX69 (Beta-galactosidase 16 OS=Arabidopsis thaliana OX=3702 GN=BGAL16 PE=2 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-27
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 26  RRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIP 85
           R+PKVQL CP+ +KIS ILFASFGTP+G C SY+IG CHSPNS A+V+ ACL +++CS+P
Sbjct: 731 RKPKVQLQCPTGRKISKILFASFGTPNGSCGSYSIGSCHSPNSLAVVQKACLKKSRCSVP 790

Query: 86  ISNLNFRGDPCPHVTKTLLVDAQCT 111
           + +  F GD CPH  K+LLV AQC+
Sbjct: 791 VWSKTFGGDSCPHTVKSLLVRAQCS 815

[Close]

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot
Match: Q75HQ3 (Beta-galactosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0428100 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.7e-20
Identity = 42/89 (47.19%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 21  VKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRA 80
           +++R + PKV++ C    +IS+I FAS+G P GDC+S+ IG CH+ +S ++V+ +C+GR 
Sbjct: 686 LQSRGKVPKVRIWCQGGNRISSIEFASYGNPVGDCRSFRIGSCHAESSESVVKQSCIGRR 745

Query: 81  KCSIPISNLNFRGDPCPHVTKTLLVDAQC 110
            CSIP+    F GDPCP + K+LLV A C
Sbjct: 746 GCSIPVMAAKFGGDPCPGIQKSLLVVADC 774

[Close]

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot
Match: Q9SCV9 (Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-20
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 27  RPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIPI 86
           RPKV L C   + I++I FASFGTP G C SY  G CH+  S AI+E  C+G+A+C++ I
Sbjct: 763 RPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTI 822

Query: 87  SNLNFRGDPCPHVTKTLLVDAQC 110
           SN NF  DPCP+V K L V+A C
Sbjct: 823 SNSNFGKDPCPNVLKRLTVEAVC 845

[Close]

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot
Match: Q5N8X6 (Beta-galactosidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0875500 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-20
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 3   HYPLV--ASWMGAKKQKVRRVKNRTR-RPKVQLSCPSKKKISNILFASFGTPSGDCQSYA 62
           HYP +   SW        R  +N  R   KVQLSCP  K IS++ F SFG PSG C+SY 
Sbjct: 748 HYPSIDLESW-------DRNTQNDGRDAAKVQLSCPKGKSISSVKFVSFGNPSGTCRSYQ 807

Query: 63  IGLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 111
            G CH PNS ++VE ACL    C++ +S+  F  D CP VTKTL ++A C+
Sbjct: 808 QGSCHHPNSISVVEKACLNMNGCTVSLSDEGFGEDLCPGVTKTLAIEADCS 851

[Close]

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSK-KKISNILFASFGTPSGDCQSYA 60
           E H   + SW+  ++       ++T+ P ++L CP + + ISNI FASFGTPSG C +Y 
Sbjct: 755 EMHPAQIDSWISPQQ------TSQTQGPALRLECPREGQVISNIKFASFGTPSGTCGNYN 814

Query: 61  IGLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 111
            G C S  + A+V+ AC+G   CS+P+S+ NF GDPC  VTK+L+V+A C+
Sbjct: 815 HGECSSSQALAVVQEACVGMTNCSVPVSSNNF-GDPCSGVTKSLVVEAACS 858

[Close]

BLAST of Cucsat.G4304 vs. NCBI nr
Match: XP_011657429.1 (beta-galactosidase 16 isoform X2 [Cucumis sativus])

HSP 1 Score: 228 bits (582), Expect = 5.76e-68
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 714 ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 773

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT
Sbjct: 774 GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 823

[Close]

BLAST of Cucsat.G4304 vs. NCBI nr
Match: XP_031742962.1 (beta-galactosidase 16 isoform X1 [Cucumis sativus])

HSP 1 Score: 228 bits (582), Expect = 8.11e-68
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 743 ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 802

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT
Sbjct: 803 GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 852

[Close]

BLAST of Cucsat.G4304 vs. NCBI nr
Match: XP_008466742.1 (PREDICTED: beta-galactosidase 16 isoform X2 [Cucumis melo])

HSP 1 Score: 217 bits (552), Expect = 1.12e-63
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVR  KNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 712 ESHYPLVASWMGAKKQKVRSAKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 771

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSR IVEHACLGR KCSIPIS+LNF+GDPCPHVTKTLLVDAQCT
Sbjct: 772 GMCHSPNSRPIVEHACLGRVKCSIPISSLNFQGDPCPHVTKTLLVDAQCT 821

[Close]

BLAST of Cucsat.G4304 vs. NCBI nr
Match: XP_008466741.1 (PREDICTED: beta-galactosidase 16 isoform X1 [Cucumis melo])

HSP 1 Score: 217 bits (552), Expect = 1.52e-63
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVR  KNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 741 ESHYPLVASWMGAKKQKVRSAKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 800

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSR IVEHACLGR KCSIPIS+LNF+GDPCPHVTKTLLVDAQCT
Sbjct: 801 GMCHSPNSRPIVEHACLGRVKCSIPISSLNFQGDPCPHVTKTLLVDAQCT 850

[Close]

BLAST of Cucsat.G4304 vs. NCBI nr
Match: XP_038885234.1 (beta-galactosidase 16 isoform X2 [Benincasa hispida])

HSP 1 Score: 209 bits (532), Expect = 3.93e-61
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQ+    KNRTRRPKV+LSCP+ K ISNILFASFGTPSGDCQSYAI
Sbjct: 648 ESHYPLVASWMGAKKQRTSGTKNRTRRPKVRLSCPTNKNISNILFASFGTPSGDCQSYAI 707

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSRA+VEHACLGRAKCSIPISNLNFRGDPCP+VTKTLLVDAQCT
Sbjct: 708 GMCHSPNSRAVVEHACLGRAKCSIPISNLNFRGDPCPYVTKTLLVDAQCT 757

[Close]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL
Match: A0A0A0KH26 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_6G382900 PE=3 SV=1)

HSP 1 Score: 228 bits (582), Expect = 2.19e-68
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 695 ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 754

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT
Sbjct: 755 GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 804

[Close]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL
Match: A0A1S3CS54 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103504084 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 5.43e-64
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVR  KNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 712 ESHYPLVASWMGAKKQKVRSAKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 771

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSR IVEHACLGR KCSIPIS+LNF+GDPCPHVTKTLLVDAQCT
Sbjct: 772 GMCHSPNSRPIVEHACLGRVKCSIPISSLNFQGDPCPHVTKTLLVDAQCT 821

[Close]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL
Match: A0A1S3CRZ8 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103504084 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 7.34e-64
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWMGAKKQKVR  KNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI
Sbjct: 741 ESHYPLVASWMGAKKQKVRSAKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 800

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSR IVEHACLGR KCSIPIS+LNF+GDPCPHVTKTLLVDAQCT
Sbjct: 801 GMCHSPNSRPIVEHACLGRVKCSIPISSLNFQGDPCPHVTKTLLVDAQCT 850

[Close]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL
Match: A0A6J1JZN0 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111489734 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 3.74e-58
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWM AKKQ+  R KN++RRPKV+LSCP+ K ISNILFASFGTPSGDCQSYA+
Sbjct: 714 ESHYPLVASWMSAKKQRASRTKNKSRRPKVRLSCPTNKNISNILFASFGTPSGDCQSYAV 773

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSRAIVEHACLGRAKC IPISN NFRGDPCP VTKTLLVDAQCT
Sbjct: 774 GMCHSPNSRAIVEHACLGRAKCVIPISNRNFRGDPCPFVTKTLLVDAQCT 823

[Close]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL
Match: A0A6J1FGB8 (Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111445236 PE=3 SV=1)

HSP 1 Score: 197 bits (502), Expect = 7.00e-57
Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYPLVASWM AKKQ+  R KN++RRPKV+LSCP+ K IS ILFASFGTPSGDCQSYA+
Sbjct: 714 ESHYPLVASWMSAKKQRASRTKNKSRRPKVRLSCPTNKNISKILFASFGTPSGDCQSYAV 773

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 110
           G+CHSPNSRAIVEHACLG+AKC IPISN NFRGDPCP VTKTLLVDAQCT
Sbjct: 774 GICHSPNSRAIVEHACLGKAKCVIPISNRNFRGDPCPFVTKTLLVDAQCT 823

[Close]

BLAST of Cucsat.G4304 vs. TAIR 10
Match: AT1G77410.1 (beta-galactosidase 16 )

HSP 1 Score: 122.9 bits (307), Expect = 1.6e-28
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 26  RRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIP 85
           R+PKVQL CP+ +KIS ILFASFGTP+G C SY+IG CHSPNS A+V+ ACL +++CS+P
Sbjct: 731 RKPKVQLQCPTGRKISKILFASFGTPNGSCGSYSIGSCHSPNSLAVVQKACLKKSRCSVP 790

Query: 86  ISNLNFRGDPCPHVTKTLLVDAQCT 111
           + +  F GD CPH  K+LLV AQC+
Sbjct: 791 VWSKTFGGDSCPHTVKSLLVRAQCS 815

[Close]

BLAST of Cucsat.G4304 vs. TAIR 10
Match: AT4G36360.1 (beta-galactosidase 3 )

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 27  RPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIPI 86
           RPKV L C   + I++I FASFGTP G C SY  G CH+  S AI+E  C+G+A+C++ I
Sbjct: 763 RPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTI 822

Query: 87  SNLNFRGDPCPHVTKTLLVDAQC 110
           SN NF  DPCP+V K L V+A C
Sbjct: 823 SNSNFGKDPCPNVLKRLTVEAVC 845

[Close]

BLAST of Cucsat.G4304 vs. TAIR 10
Match: AT4G36360.2 (beta-galactosidase 3 )

HSP 1 Score: 94.0 bits (232), Expect = 8.2e-20
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 27  RPKVQLSCPSKKKISNILFASFGTPSGDCQSYAIGLCHSPNSRAIVEHACLGRAKCSIPI 86
           RPKV L C   + I++I FASFGTP G C SY  G CH+  S AI+E  C+G+A+C++ I
Sbjct: 763 RPKVHLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILER-CVGKARCAVTI 822

Query: 87  SNLNFRGDPCPHVTKTLLVDAQC 110
           SN NF  DPCP+V K L V+A C
Sbjct: 823 SNSNFGKDPCPNVLKRLTVEAVC 844

[Close]

BLAST of Cucsat.G4304 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 )

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTRRPKVQLSCPSKKKISNILFASFGTPSGDCQSYAI 60
           ESHYP +  W            N    P+V L C     IS+I FAS+GTP G C  ++I
Sbjct: 769 ESHYPPLRKWSTPDYINGTMSINSV-APEVHLHCEDGHVISSIEFASYGTPRGSCDGFSI 828

Query: 61  GLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 111
           G CH+ NS +IV  AC GR  C I +SN  F  DPC    KTL V ++C+
Sbjct: 829 GKCHASNSLSIVSEACKGRNSCFIEVSNTAFISDPCSGTLKTLAVMSRCS 877

[Close]

BLAST of Cucsat.G4304 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 85.1 bits (209), Expect = 3.8e-17
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 1   ESHYPLVASWMGAKKQKVRRVKNRTR-RPKVQLSCP-SKKKISNILFASFGTPSGDCQSY 60
           +SH P V +W    K     + NR R RP + L CP S + I +I FASFGTP G C S+
Sbjct: 747 QSHPPPVDTWTSDSK-----ISNRNRTRPVLSLKCPISTQVIFSIKFASFGTPKGTCGSF 806

Query: 61  AIGLCHSPNSRAIVEHACLGRAKCSIPISNLNFRGDPCPHVTKTLLVDAQCT 111
             G C+S  S ++V+ AC+G   C++ +S   F G+PC  V K+L V+A C+
Sbjct: 807 TQGHCNSSRSLSLVQKACIGLRSCNVEVSTRVF-GEPCRGVVKSLAVEASCS 852

The following BLAST results are available for this feature:

BLAST of Cucsat.G4304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX69	2.3e-27	62.35	Beta-galactosidase 16 OS=Arabidopsis thaliana OX=3702 GN=BGAL16 PE=2 SV=2	[more]
Q75HQ3	4.7e-20	47.19	Beta-galactosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0428100 PE...	[more]
Q9SCV9	6.1e-20	54.22	Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1	[more]
Q5N8X6	6.1e-20	46.85	Beta-galactosidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0875500 PE...	[more]
Q10NX8	2.3e-19	44.14	Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE...	[more]

BLAST of Cucsat.G4304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657429.1	5.76e-68	100.00	beta-galactosidase 16 isoform X2 [Cucumis sativus]	[more]
XP_031742962.1	8.11e-68	100.00	beta-galactosidase 16 isoform X1 [Cucumis sativus]	[more]
XP_008466742.1	1.12e-63	93.64	PREDICTED: beta-galactosidase 16 isoform X2 [Cucumis melo]	[more]
XP_008466741.1	1.52e-63	93.64	PREDICTED: beta-galactosidase 16 isoform X1 [Cucumis melo]	[more]
XP_038885234.1	3.93e-61	89.09	beta-galactosidase 16 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G4304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH26	2.19e-68	100.00	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_6G382900 PE=3 SV=1	[more]
A0A1S3CS54	5.43e-64	93.64	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103504084 PE=3 SV=1	[more]
A0A1S3CRZ8	7.34e-64	93.64	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103504084 PE=3 SV=1	[more]
A0A6J1JZN0	3.74e-58	85.45	Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111489734 PE=3 SV=1	[more]
A0A6J1FGB8	7.00e-57	83.64	Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111445236 PE=3 SV=1	[more]

BLAST of Cucsat.G4304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77410.1	1.6e-28	62.35	beta-galactosidase 16	[more]
AT4G36360.1	4.3e-21	54.22	beta-galactosidase 3	[more]
AT4G36360.2	8.2e-20	54.22	beta-galactosidase 3	[more]
AT2G32810.1	1.5e-18	42.73	beta galactosidase 9	[more]
AT2G28470.1	3.8e-17	41.96	beta-galactosidase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	GENE3D	2.60.120.740		coord: 13..110 e-value: 1.8E-15 score: 59.1
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PFAM	PF02140	Gal_Lectin	coord: 32..109 e-value: 1.1E-20 score: 73.8
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PROSITE	PS50228	SUEL_LECTIN	coord: 24..110 score: 15.750338
None	No IPR available	PANTHER	PTHR23421:SF157	D-GALACTOSIDE/L-RHAMNOSE BINDING SUEL LECTIN PROTEIN	coord: 1..104
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4304.T1	Cucsat.G4304.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds