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Cucsat.G4234 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATCTGTGCATGTAAGGTATTCTTTCTCCGATCACAAATTATTCCAACCCTAACCCTTTCTCTCCCCTAAAGTCCTCCGGCACATAACCAAAAAAAAAAAACTACAGGTCAAAGAAGAAAATTTGATAATTGTGTTCTTAAATTAATACTTCCTTTTGACAAGAAAGAAAATGGGCGTGGCGTCATTGGATTGAGATCATATTCTCATAAACCAAGAAACTAGGGTTTCATCTTGTCAGGGATTAGATGAATCAACCATCGAAGAAGAAGAATTTCCGGAAAAGGAATTGTTATGATTCGGAAGATGGAGGAGACGAGGCAAACTCCGTTACCGCCATATCGGAGGAAGAGGAAGAAGAGCACAGGATGGCATTGGAGGAGGTAAAATTTCTCCAGAAACAGAGGGGAGAGAAGGGCCGGAATTCCTGCAGTTCCTCCAGTATCGGCTCAGACCACCACCGCCGGTGCTGGCGGAGCCAGTGGCGGCGGCGGTCTTGTTAGGAAATCCACTGATGCTAACAGTAAAACTGGTGGTGGTGGGGGCAATAAGAATGAAAGTGCGGGAGGCGAAGGCGACAAGGATGATTTGGTCCTTCAGGATACCTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCCAATATGTAATATTCTTCTTAACTATGTTGTTTCTTTACAGATATTTCTATTTGTAATAAGTTGGAGTTCTGATGTGTTTTCATGACAGGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTGAGTGAGTAGCCAATCTAATTTTTCTTGTTTCTTCTTTAACTGTTCTTCTGTTTATTTCAAATCCGCTGAGTGCTGCATTAGAATTCTGTTAGAATGACCGAAATTAATATCAGAATTCTTTGGGTTTTTGTATTCTAGACTTGTTTTTGCTGATCATTTTTGGATCGTTATCACTTATCAGGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAGTATGCCCTTTCCCCTCCTTTATGAAAGAGTTTCATTAATCGATCTCTAAGATTTTTACTTGTGTGTACTTTATATGAATTGTGAACAATTTGAGCAAGTTATCGGGGGTACACAATGGAATCATTCTGCATTTTGTGCATTAACACAAAAATTAAGCTTTACATGGAATTTGTCGTTCCTTGATTATTAACTTGTCTTCTGGTTTATCGGGGGTACTAAATAGTGTGAAATGCCGTTTAAAACAACCATTTGTTATAATTGAGGTGGATGTGGATATTTTCCATTGACATTTATGAAGTGTGTTCAACTGCGCATTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGGTATTTCATACCTTTGCTTTCATATTGTTTTACTTTTACCCTTTGGGATGATATTGTTATGTTATTTACTCTGGATGTGAGTTAATTATAGTCTTAGTGATTAGCTACCTAAGATGCCAGTTTCTGACAAATTTTCTGGATCCCAAATATAAGATTCTAGTGGTACCCTTGTCACCCTGTAATGTTAGAAAATGTATGCCTTTGTTCTATATTCTATGCATGTGTATAGGTATGGATCGTTAGACTACAAACTAAGTGCATGGTTGGGACTGATTATTTAACGGTTAAAATTACTTCGAAGAACACAAAATTTAATCACTCTAAGCCAATTTAACGTTTAATTTTACATTTTAAAACCCATTTCAAACTATTAAACTGGATTTTGATGAATTACTAAAGCATTTTTCGAATGATTTTAACCATTTTTTAATTACTCCCCAACATTCCTTAACATGCCCTGAGCTACCACGTGAAAGTGGGAAAAATATACTTCTGCGCTTTAGTAGACAGTATACTGTTTCTGACGAGGAATAAAAAAATGTGTAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAACGCACTTCTCAGACTGTTGCTTCTCTGCAATTGGACGTAACTTGCTTGATAAATTAACCATCAAGGATAAAGATCTTAGTCCTACGAATATTCTTTCACATCAGGATAGTCATCTCAGGACCTCAGGTTAGGGAGGGAAGAAATTCATAATTCATAGTTGTAAAGTCGGCTGAGTAACTTATGAGTCGAAGTAAGTTTTGGATATAATGATATTGATAATGTGATTTGCCCTCTTTGCCCTATCTGGCCGTGTCTAGTCTAAATGTTGAGATTGAGAACATGTACAATATTGATGTTGGAAAAATGGAAAATTACAAACTAATATTTATATGTTTTGACGTAGTTGAGATCTTATGCTTATATGTTATTAATTGATGTCTTAGCTGATTATCACCTTGCTATATACTTTGTCTCTTGTTAATATTCTGCTGCTATATAAACTATAGGATGGTAAACCATGG ATGGTTGAAGATCCCAATATGTTGAAGTATATCGAACAAGAACTTGCAAAGAAAAGGGGAAGAACTGTTGAGACTGTAGAAGGAGCTGAGAATGACTTGAAACAGGCAGAAGATGAATTATACAAAATCCCAGAGCATCTTAAAGTTAAAAGACGAAATTCTAATGAAAGTTCCACTCAGTGGACTACAGGGATTGCAGAGGTTCAGCTTCCAATTGAATTCAAGTTGAAGAACATTGAGGAAACTGAGGCTGCTAAAAAGCTTCTACAGGAAAAGAGATTTGTGGGTCGTTCGACGTCAGAGTTCAGCATCCCCTCAAGTTATAGTGCTGATTATTTTCACCGTGGCAGGGATTATGCTGAAAAACTCAGAAGAGAACATCCTGAGCTATACAAGGATAGAAGTTTGCAAGATGATGGTTCTGGCTCCAAACCAGCAGAGACTGGTACAGAGGCTGCTGGGCAAAGGCAGGCTGCCACAGATGAGTTCATGCTAGAACGCTTCCGGAAACGCGAACGTCATCGGGTTATGCGGAGATAA MVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDYAEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR Homology
BLAST of Cucsat.G4234 vs. ExPASy Swiss-Prot
Match: F4HVZ5 (Protein COP1 SUPPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=CSU2 PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-67 Identity = 135/185 (72.97%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy Swiss-Prot
Match: Q3TQI7 (Telomere length and silencing protein 1 homolog OS=Mus musculus OX=10090 PE=1 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13 Identity = 64/180 (35.56%), Postives = 98/180 (54.44%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy Swiss-Prot
Match: Q9NZ63 (Telomere length and silencing protein 1 homolog OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.3e-13 Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy Swiss-Prot
Match: Q5RC87 (Telomere length and silencing protein 1 homolog OS=Pongo abelii OX=9601 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12 Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 0
BLAST of Cucsat.G4234 vs. NCBI nr
Match: XP_011654560.1 (protein COP1 SUPPRESSOR 2 [Cucumis sativus] >KAE8648310.1 hypothetical protein Csa_004675 [Cucumis sativus]) HSP 1 Score: 343 bits (880), Expect = 7.76e-117 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Cucsat.G4234 vs. NCBI nr
Match: XP_008466165.1 (PREDICTED: uncharacterized protein C9orf78 homolog [Cucumis melo] >KAA0050254.1 Hepatocellular carcinoma-associated antigen 59 [Cucumis melo var. makuwa] >TYJ98152.1 Hepatocellular carcinoma-associated antigen 59 [Cucumis melo var. makuwa]) HSP 1 Score: 341 bits (874), Expect = 6.13e-116 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cucsat.G4234 vs. NCBI nr
Match: XP_022146355.1 (uncharacterized protein C9orf78 homolog [Momordica charantia]) HSP 1 Score: 333 bits (853), Expect = 1.03e-112 Identity = 173/179 (96.65%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of Cucsat.G4234 vs. NCBI nr
Match: KAG6601926.1 (Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 332 bits (850), Expect = 2.48e-112 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cucsat.G4234 vs. NCBI nr
Match: KAG7032622.1 (putative protein C9orf78 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 332 bits (850), Expect = 2.56e-112 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy TrEMBL
Match: A0A0A0KLP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129300 PE=3 SV=1) HSP 1 Score: 343 bits (880), Expect = 6.04e-117 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy TrEMBL
Match: A0A5D3BEG5 (Hepatocellular carcinoma-associated antigen 59 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00320 PE=3 SV=1) HSP 1 Score: 341 bits (874), Expect = 2.97e-116 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy TrEMBL
Match: A0A1S3CQV4 (uncharacterized protein C9orf78 homolog OS=Cucumis melo OX=3656 GN=LOC103503658 PE=3 SV=1) HSP 1 Score: 341 bits (874), Expect = 2.97e-116 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy TrEMBL
Match: A0A6J1CX27 (uncharacterized protein C9orf78 homolog OS=Momordica charantia OX=3673 GN=LOC111015586 PE=3 SV=1) HSP 1 Score: 333 bits (853), Expect = 4.97e-113 Identity = 173/179 (96.65%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of Cucsat.G4234 vs. ExPASy TrEMBL
Match: A0A6J1JM60 (protein COP1 SUPPRESSOR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111487129 PE=3 SV=1) HSP 1 Score: 332 bits (850), Expect = 1.24e-112 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cucsat.G4234 vs. TAIR 10
Match: AT1G02330.1 (CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). ) HSP 1 Score: 257.3 bits (656), Expect = 9.1e-69 Identity = 135/185 (72.97%), Postives = 157/185 (84.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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