Cucsat.G4110 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATTACAACTCTTCAGGAGCAGGAAGAATACGAGAGATAGAAAAACAAATGATATTTAGGGGGAAAAAAGATAAATAATATGCCTTTTTCATTATCATTTCCTGGATAAACAACCATAGCATGCAAGAACCTCAAGGTGAAAGTTTTCTCAAACGAAAAATCTGTTCATTGACATTTACAGAATCCTGATCTCAAATTGTGAAACAACAACCATAAACAATCCACACAATTCCAATTTTTTTTATAGAAAAATTAAAAACAAAACAACAATTCACTCCTGCTTCTTTTTCTCCCTTCTGATTTGGTTCAATTTGTAAGTCAGAAACTGGAGCTTTATTTGTAGAACTTGAAAGTTACTAAACTTCCACTGCACATTAACCATCTCTTGCATTGCTTATTAAGAAAAAAGCAACAATGCTGCAAGACAATGACATTCTAAGGATGAGAAACAACCGGTGGATGTTTAGGGAACCCTCCAAACATGTGGTGGGAGAAGTACTTTGGAGGGGACTTGGGAACAGGAGGGAATTGAGGGATAGGTGGCCATGGCTTCTTAAAGAATGGATGATGGGGAATTTTTGGAATGTGAGGCAAATGCTTGAAGAATGGGTGTTTATGCTTGAAGAATGGGTGTTTGTGCTTGAAAAATGGATGCTTGTAAATGGGAACAGGTGGAGGGAGGGGTTTCTTATATATGGGAACAGGAGGTGGAAGAGGCTTCTTGTAGACTGGCACTGGTGGAGGATTAGGTTTCTTATAAACAGGAACTGGTGGTGGAAGTGGCTTCTCATATATTGGTGGAGGATTAGGTTTCTTGTAAACAGGAACAGGGGGAGGACAAGGTTTTTTGTAAACAGGAACCGGTGGTGGAAGTGGCTTCTTGTAGATTGGCACTGGTGGAGGCTTAGGTTTTACATACACAGGAGGTGGAAGTGGCTTTTCATAAATAGGCGGTGGATGTGGCTTTTCATAGACTGGTGTAGGTGGAGGAACAGGTTTTTTATAAACCGGAACAGGAGGTGGAAGTGGCTTTTCATAGACCGGAGTAGGTGGAGGAATAGGCTTTACATACACAGGAACAGGTGGTGGAAGTGGCTTTTCATAGACAGGTGTAGGCGGAGGATGAGGTTTTTCATAAACTGGAGTAGGCGGTGGAAGTGGTTTTTCATAGACCGGTGTAGGTGGGGGAAGAGGTTTTTCATAAACTGGAGTAGGCGGTGGAAGTGGTTTTTCATAGACCGGTGTAGGTGGAGGAAGAGGTTTTTCATAAACAGGAACAGGTGGTGGAAGTGGCTTTTCATATACCGGTGTAGGTGGTGGAACAGGTTTTTCATAAACTGGAACAGGTGGTGGAAGTGGCTTTTCATACACCGGCGTTGGTGGGAACTCTTTAGGTGGAAATGGAGAGAAGACTTTAGGTGGCAATGGAGGGAAGGAGAATGGGGGAACAAAATGCTTCAAATGTGGATGATGAAAGTCAGGTATAAGAGGGAGTGGCAAAGGAAATTGAGGGAACTTGGTAAGAGGAGGGTACTTGAAAAATGGCCAAAGGAAAGCTGATGTACAAGTTCCTGGTGAAATCTTGATTTTACCAGGTAACCCAAAAGTGTGTTTCTCATCTGATTTGGACAGTAAAACAATCTTAGAGGATTGAAGGTCATCATGAGTAGGGCAAGGGTTGGCTGCTGCACTATAAAGTTGTGCATAACATTCTTCCTTCAACTTTCCATCTTCCACAATGGCATTAGGCAGCAATACAGTGAACTTTCCTTCTTCATTCAACTCCCCAATCCCTCTTGTTTTGAAGTTCCCATCGCTTGATTTGCAATCTATGGCTACTTTCAGTCCTGCACATAGTAAAAAGTGTACATTTCGTATCAGCACGATTGCCTTTTGGTAGAGTGTTAGATATAATTTTCAAATGTGTGCACTTATTCAAACATCAGTTTATAACATGCACAATTTGAGTAATGTATGATCTTGGAAGTCTAAAAATCTAAATTTATTCATCTACAATAGTTTAGATGTTTAGTTGATACAATAATTATTTCATAATTTAAATTAATACAACTCTTTAAGTTTAGAGGTATAATTTGATATTTTTCATCCATCAATTTAAGTCTTTGGGTCAATTGGCAATTTGACGGTCTTTGACGATATGCCCTCCACTCATCCAGTGTCACTAGCAAAAACTTCTTTCATTTAGACAAGTATTTTGTGTCGCTTAATTGATGAGAATCTGAGAGGTAGATGTTTGTTACAAAGATGCCTAAAGCTTGTTGAAGTAGGTTTAACATTGGATTTTAAAAGAGGTTTAGATTGTATAGATCAACTATTAATGAAAACCGAAAGACAGTGACTACACAATATTTAGATACTAAAACAAAACATTTAAAGTTGAATGATTAAAACAGAAAGTGAATGGAGACCAAAATGAAATAAACTAAGTAATCAACCCATCCATTCTCATGAGTAGTGCCTATACTATAAAAGACATGTTTTCATCACTTGTAAAGCTAAAACAAAAAGAGAAATTAACTCTCCTAAGAAATAGCTTTCACCATAATCATAGAACAGAAAAAAGATGGCATGAACCTGACAAAGCATGGCTAGTTTTTATGTTACTCTCTTTGCAATCAGCACATTCACCAACACCAACGACCTCGACCGACTTTACATCGGCATTGCACAATGTTGCAGCAAAAACAAAGGACACCAAGAAGAAGCACAACAAGGGTGCCCTTCCAAGCAGAGGAGGAATCCTCATGTCAAAACCACAATCTTAAACCCGACCCAAAACAAACTCTTTTCGAGACCGAGCAGAAGCTATGAGCTTCAAGGCAATGTACAAGAAATGAAAGAGATGAAGGTCATTATATAGGAGCAAATAAGTGAGTAAAAAAAGATGAGTTTTGAGAGCTTGTTAAGGGCATGTCACATGAGATAGGGGGGACCCTTAAAGAAAGGACTA ATGCTGCAAGACAATGACATTCTAAGGATGAGAAACAACCGGTGGATGTTTAGGGAACCCTCCAAACATGTGGTGGGAGAAGTACTTTGGAGGGGACTTGGGAACAGGAGGGAATTGAGGGATAGGTGGCCATGGCTTCTTAAAGAATGGATGATGGGGAATTTTTGGAATGTGAGGCAAATGCTTGAAGAATGGGTGTTTATGCTTGAAGAATGGGTGTTTGTGCTTGAAAAATGGATGCTTGTAAATGGGAACAGGTGGAGGGAGGGGTTTCTTATATATGGGAACAGGAGGTGGAAGAGGCTTCTTGTAGACTGGCACTGGTGGAGGATTAGGTTTCTTATAAACAGGAACTGGTGGTGGAAGTGGCTTCTCATATATTGGTGGAGGATTAGGTTTCTTGTAAACAGGAACAGGGGGAGGACAAGGTTTTTTGTAAACAGGAACCGGTGGTGGAAGTGGCTTCTTGTAGATTGGCACTGGTGGAGGCTTAGGTTTTACATACACAGGAGGTGGAAGTGGCTTTTCATAAATAGGCGGTGGATGTGGCTTTTCATAGACTGGTGTAGGTGGAGGAACAGGTTTTTTATAAACCGGAACAGGAGGTGGAAGTGGCTTTTCATAGACCGGAGTAGGTGGAGGAATAGGCTTTACATACACAGGAACAGGTGGTGGAAGTGGCTTTTCATAGACAGGTGTAGGCGGAGGATGAGGTTTTTCATAAACTGGAGTAGGCGGTGGAAGTGGTTTTTCATAGACCGGTGTAGGTGGAGGAAGAGGTTTTTCATAAACAGGAACAGGTGGTGGAAGTGGCTTTTCATATACCGGTGTAGGTGGTGGAACAGGTTTTTCATAAACTGGAACAGGTGGTGGAAGTGGCTTTTCATACACCGGCGTTGGTGGGAACTCTTTAGGTGGAAATGGAGAGAAGACTTTAGGTGGCAATGGAGGGAAGGAGAATGGGGGAACAAAATGCTTCAAATGTGGATGATGAAAGTCAGGTATAAGAGGGAGTGGCAAAGGAAATTGAGGGAACTTGGTAAGAGGAGGGTACTTGAAAAATGGCCAAAGGAAAGCTGA MLQDNDILRMRNNRWMFREPSKHVVGEVLWRGLGNRRELRDRWPWLLKEWMMGNFWNVRQMLEEWVFMLEEWVFVLEKWMLVNGNRWREGFLIYGNRRWKRLLVDWHWWRIRFLINRNWWWKWLLIYWWRIRFLVNRNRGRTRFFVNRNRWWKWLLVDWHWWRLRFYIHRRWKWLFINRRWMWLFIDWCRWRNRFFINRNRRWKWLFIDRSRWRNRLYIHRNRWWKWLFIDRCRRRMRFFINWSRRWKWFFIDRCRWRKRFFINRNRWWKWLFIYRCRWWNRFFINWNRWWKWLFIHRRWWELFRWKWREDFRWQWREGEWGNKMLQMWMMKVRYKREWQRKLRELGKRRVLEKWPKES Homology
BLAST of Cucsat.G4110 vs. NCBI nr
Match: GAV77438.1 (hypothetical protein CFOL_v3_20909 [Cephalotus follicularis]) HSP 1 Score: 106 bits (264), Expect = 2.28e-23 Identity = 74/196 (37.76%), Postives = 93/196 (47.45%), Query Frame = 0
BLAST of Cucsat.G4110 vs. NCBI nr
Match: CBI37917.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 79.0 bits (193), Expect = 2.04e-13 Identity = 55/149 (36.91%), Postives = 68/149 (45.64%), Query Frame = 0
BLAST of Cucsat.G4110 vs. NCBI nr
Match: TNN35314.1 (hypothetical protein EYF80_054524 [Liparis tanakae]) HSP 1 Score: 64.3 bits (155), Expect = 6.81e-09 Identity = 50/131 (38.17%), Postives = 65/131 (49.62%), Query Frame = 0
BLAST of Cucsat.G4110 vs. NCBI nr
Match: XP_033927473.1 (uncharacterized protein LOC117437341 [Melopsittacus undulatus]) HSP 1 Score: 58.9 bits (141), Expect = 1.52e-05 Identity = 102/366 (27.87%), Postives = 154/366 (42.08%), Query Frame = 0
BLAST of Cucsat.G4110 vs. NCBI nr
Match: KAG0729230.1 (Hemicentin-1 [Chionoecetes opilio]) HSP 1 Score: 58.5 bits (140), Expect = 1.94e-05 Identity = 79/226 (34.96%), Postives = 97/226 (42.92%), Query Frame = 0
BLAST of Cucsat.G4110 vs. ExPASy TrEMBL
Match: A0A1Q3CBF3 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20909 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 1.11e-23 Identity = 74/196 (37.76%), Postives = 93/196 (47.45%), Query Frame = 0
BLAST of Cucsat.G4110 vs. ExPASy TrEMBL
Match: A0A368UIL9 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_11G098400 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.72e-19 Identity = 92/298 (30.87%), Postives = 117/298 (39.26%), Query Frame = 0
BLAST of Cucsat.G4110 vs. ExPASy TrEMBL
Match: A0A4Z2F3R2 (Uncharacterized protein OS=Liparis tanakae OX=230148 GN=EYF80_054524 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.30e-09 Identity = 50/131 (38.17%), Postives = 65/131 (49.62%), Query Frame = 0
BLAST of Cucsat.G4110 vs. ExPASy TrEMBL
Match: A0A397ZLJ9 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_D01636 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.37e-05 Identity = 93/323 (28.79%), Postives = 120/323 (37.15%), Query Frame = 0
BLAST of Cucsat.G4110 vs. ExPASy TrEMBL
Match: A5B4T6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036363 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.09e-04 Identity = 33/98 (33.67%), Postives = 48/98 (48.98%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|