Cucsat.G3015 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3015
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	thylakoid lumenal 19 kDa protein, chloroplastic
Location	ctg1041: 6551618 .. 6553019 (-)
RNA-Seq Expression	Cucsat.G3015
Synteny	Cucsat.G3015

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTAAAGACATAAATTAGGGGTTAGTTATAAAGTAAAATGGGATTCTACAGAAATAGAGAAAAAAAATACATAAATTCAAAAAAAAAAAAACGATTTAGAAAAATAAAAGAAAATAGAAAAAGAATGGATAAGGAGAAAATCCTGTTCGAGGAGATACACCAGAAGCCCAAATCCACGAAAATCAATCACTATGGCCACAGCAATCGCGCCATTGGCGTTCTTAACCTCCACCGCCGCTTCCACCGGCACAACCGCCCCAAAACCACCGCAAGCTTCATCGTTACCAAAGCCCCAAATTCCCATTCTCCAATCCAAACCTCCACTTTCATCATCAACTGCCCCAATCTCCATCGCAGCCACTGCCATTGCCGTAGCTGCGATCCTTAGCACCGCTCCACCCTCCCTCGCCGACACCGGGGCCGCTTTCAACGTCTACTACGGCACTGCCGCCAGCGCCGCCAACTACGGTGGCCTTGGCGGCAACGCCAACAAGAAAGACACAGCAGAATACATCTACGACGTGCCGGAAGGATGGAAAGAGCGATTAGTATCCAAAGTCGAAAAAGGTACTCCAAAATCCCTAAATTAAAGATATCTAATAGCTCAATTCGTTCCGAAAATTAATTCTACCAACTAATTTCCGCAGGTACCAACGGAACCGATAGTGAATTTTACAATCCGAAGAAACGATCAGAGAAAGAATACCTAACTTTCCTGGCTGGAATCCGGCAATTAGGGCCGAAGGATGTGATTCTGAATAACCTGGCTCTATCGGACGTGAATTTGCAGGATCAAATCGCGAGCGCCGAGAGCTTCTTGGCGGAAGAGAAGAAGGATGAGAATGGACAGGTTTATTATGTGTACGAGATCGACGGCGCCGGAACTCATAGTTTGATCTCGGTGACTTGTGCAAAGAACAAGCTGTATGCTCATTTTGTGAATGCGCCGACGCCGGAGTGGAATCGGGACCAGGATATGCTCCGGCATGTTCATGATTCGTTCAAGACGGTGGGATCGTATTAGGCAGCTTTTGTGGCGTCACCGGAGATTTGATCGGAGCGTGTATGAATTTGTTGTTATGCACACACACATATATATATGCTTATTCTTGAATGATGAGAATCGGATGCTTTTTTTCACCATTCACACTCATCTCTCTCGTCTCTGTTTTATGAGAATTTTGTTCATACAATCTAATGTTTTTGGAAGATGACTTGTGTAAATTTAGCAAGTTTTAATTAAATATATGCTAATGTTTAATTTGTTAGTTGCGAATTTGAACGTTACTCAAATTTGATTAAAACTTCACAACATTAGCTTAGATGTTCACATCTTTACTTCATGCAAGGTTGATCAACCTTACATGCCTAATTTAGGTTTGATGCCTGTATTGAGATTAT

Coding sequence (CDS)

ATGGCCACAGCAATCGCGCCATTGGCGTTCTTAACCTCCACCGCCGCTTCCACCGGCACAACCGCCCCAAAACCACCGCAAGCTTCATCGTTACCAAAGCCCCAAATTCCCATTCTCCAATCCAAACCTCCACTTTCATCATCAACTGCCCCAATCTCCATCGCAGCCACTGCCATTGCCGTAGCTGCGATCCTTAGCACCGCTCCACCCTCCCTCGCCGACACCGGGGCCGCTTTCAACGTCTACTACGGCACTGCCGCCAGCGCCGCCAACTACGGTGGCCTTGGCGGCAACGCCAACAAGAAAGACACAGCAGAATACATCTACGACGTGCCGGAAGGATGGAAAGAGCGATTAGTATCCAAAGTCGAAAAAGGTACCAACGGAACCGATAGTGAATTTTACAATCCGAAGAAACGATCAGAGAAAGAATACCTAACTTTCCTGGCTGGAATCCGGCAATTAGGGCCGAAGGATGTGATTCTGAATAACCTGGCTCTATCGGACGTGAATTTGCAGGATCAAATCGCGAGCGCCGAGAGCTTCTTGGCGGAAGAGAAGAAGGATGAGAATGGACAGGTTTATTATGTGTACGAGATCGACGGCGCCGGAACTCATAGTTTGATCTCGGTGACTTGTGCAAAGAACAAGCTGTATGCTCATTTTGTGAATGCGCCGACGCCGGAGTGGAATCGGGACCAGGATATGCTCCGGCATGTTCATGATTCGTTCAAGACGGTGGGATCGTATTAG

Protein sequence

MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIAVAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVGSY

Homology

[Close]

BLAST of Cucsat.G3015 vs. ExPASy Swiss-Prot
Match: P82658 (Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g63540 PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 7.2e-77
Identity = 144/224 (64.29%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 38  ILQSKPPLSSSTAPI----------SIAATAIAVAAILSTAP--PSLADTGAAFNVYYGT 97
           I  + P +S++  PI          +  A A+A  ++L+  P  P+  +    + +YYGT
Sbjct: 5   IFLASPVISATRTPIVPKAIASRLGTSLAAALAATSVLTMVPVLPAAGEGNQTYKIYYGT 64

Query: 98  AASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEY 157
           AASAANYGG GGN+++K +AEY+YDVPEGWKERLVSKVEKGTNGTDSEFYNPKK++EKEY
Sbjct: 65  AASAANYGGYGGNSDRKTSAEYVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEY 124

Query: 158 LTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGT 217
           LTFLAG RQL P+DVILNNLALSDV LQD IA A+  ++EE+KDE GQVYY+YEIDG G 
Sbjct: 125 LTFLAGFRQLAPRDVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGK 184

Query: 218 HSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVGS 250
           HSLI+VTC+KN+LYAHFVNAP PEWNRD D L H+ DSFKTV S
Sbjct: 185 HSLITVTCSKNRLYAHFVNAPAPEWNRDHDTLTHLRDSFKTVSS 228

[Close]

BLAST of Cucsat.G3015 vs. NCBI nr
Match: XP_008461279.1 (PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis melo] >KAA0058638.1 thylakoid lumenal 19 kDa protein [Cucumis melo var. makuwa] >TYK10445.1 thylakoid lumenal 19 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1185), Expect = 6.93e-163
Identity = 241/250 (96.40%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAIAPLAFLTSTAASTGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of Cucsat.G3015 vs. NCBI nr
Match: XP_004135924.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis sativus] >KGN45140.1 hypothetical protein Csa_016904 [Cucumis sativus])

HSP 1 Score: 457 bits (1176), Expect = 1.36e-161
Identity = 244/250 (97.60%), Postives = 244/250 (97.60%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAIAPLAFLT    STGTTAPKPPQASSLPKPQIPILQSKPPLSS TAPISIAATAIA
Sbjct: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLSS-TAPISIAATAIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAILSTA PSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV
Sbjct: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           HDSFKTVGSY
Sbjct: 241 HDSFKTVGSY 245

[Close]

BLAST of Cucsat.G3015 vs. NCBI nr
Match: XP_038896859.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 454 bits (1168), Expect = 2.70e-160
Identity = 234/250 (93.60%), Postives = 242/250 (96.80%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAI PLAF ++ AASTGTTAPKPPQ   LPKPQIPILQSKPPLS+STAPISIAAT IA
Sbjct: 1   MATAITPLAFFSAAAASTGTTAPKPPQTPPLPKPQIPILQSKPPLSTSTAPISIAATTIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAILST PPSLADTGAAFNVYYGTAASAANYGGLGGNA+KKDTAEYIYDVPEGWKERLV
Sbjct: 61  VAAILSTTPPSLADTGAAFNVYYGTAASAANYGGLGGNASKKDTAEYIYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKR+EKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRTEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLAEEKKDENGQ+YYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           H+SFKT+GSY
Sbjct: 241 HESFKTIGSY 250

[Close]

BLAST of Cucsat.G3015 vs. NCBI nr
Match: XP_023547955.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410 bits (1053), Expect = 8.09e-143
Identity = 217/251 (86.45%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQI-PILQSKPPLSSSTAPISIAATAI 60
           MA AI+PLAF ++ AASTGTTAPK PQ     KPQI PILQSKP LSS TA    A +AI
Sbjct: 1   MAAAISPLAFFSAAAASTGTTAPKLPQIPPPQKPQIIPILQSKPSLSSLTA----AGSAI 60

Query: 61  AVAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERL 120
           A+AAI+ST+PPSLAD G AFNVYYGTAASAANYGGLGGNANKKD+AEY+YDVP+GWKERL
Sbjct: 61  AIAAIVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNANKKDSAEYVYDVPDGWKERL 120

Query: 121 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 180
           VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA
Sbjct: 121 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 180

Query: 181 ESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 240
           ESF AEEKKDENGQ+YY YEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH
Sbjct: 181 ESFSAEEKKDENGQIYYEYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 240

Query: 241 VHDSFKTVGSY 250
           VH+SFKT+GSY
Sbjct: 241 VHESFKTIGSY 247

[Close]

BLAST of Cucsat.G3015 vs. NCBI nr
Match: XP_022991922.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 405 bits (1042), Expect = 7.29e-141
Identity = 216/251 (86.06%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQI-PILQSKPPLSSSTAPISIAATAI 60
           MATAI+PLAF ++ AASTGTTAPK PQ     KPQI PILQSKP LSS TA    A +AI
Sbjct: 24  MATAISPLAFFSAAAASTGTTAPKLPQ-----KPQIIPILQSKPSLSSLTA----ACSAI 83

Query: 61  AVAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERL 120
           A+AAI+ST+PPSLAD G AFNVYYGTAASAANYGGLGGNA+KKD+AEY+YDVP+GWKERL
Sbjct: 84  AIAAIVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNADKKDSAEYVYDVPDGWKERL 143

Query: 121 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 180
           VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA
Sbjct: 144 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 203

Query: 181 ESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 240
           ESF AEEKKDENGQ+YY YEID AGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH
Sbjct: 204 ESFSAEEKKDENGQIYYEYEIDSAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 263

Query: 241 VHDSFKTVGSY 250
           VH+SFKT+GSY
Sbjct: 264 VHESFKTIGSY 265

[Close]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL
Match: A0A5D3CG07 (Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00930 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 3.36e-163
Identity = 241/250 (96.40%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAIAPLAFLTSTAASTGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL
Match: A0A1S3CES2 (thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499916 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 3.36e-163
Identity = 241/250 (96.40%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAIAPLAFLTSTAASTGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL
Match: A0A0A0K624 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428280 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 6.59e-162
Identity = 244/250 (97.60%), Postives = 244/250 (97.60%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQIPILQSKPPLSSSTAPISIAATAIA 60
           MATAIAPLAFLT    STGTTAPKPPQASSLPKPQIPILQSKPPLSS TAPISIAATAIA
Sbjct: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLSS-TAPISIAATAIA 60

Query: 61  VAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAILSTA PSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV
Sbjct: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 250
           HDSFKTVGSY
Sbjct: 241 HDSFKTVGSY 245

[Close]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL
Match: A0A6J1JN94 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488417 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 3.53e-141
Identity = 216/251 (86.06%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTAASTGTTAPKPPQASSLPKPQI-PILQSKPPLSSSTAPISIAATAI 60
           MATAI+PLAF ++ AASTGTTAPK PQ     KPQI PILQSKP LSS TA    A +AI
Sbjct: 24  MATAISPLAFFSAAAASTGTTAPKLPQ-----KPQIIPILQSKPSLSSLTA----ACSAI 83

Query: 61  AVAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERL 120
           A+AAI+ST+PPSLAD G AFNVYYGTAASAANYGGLGGNA+KKD+AEY+YDVP+GWKERL
Sbjct: 84  AIAAIVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNADKKDSAEYVYDVPDGWKERL 143

Query: 121 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 180
           VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA
Sbjct: 144 VSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASA 203

Query: 181 ESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 240
           ESF AEEKKDENGQ+YY YEID AGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH
Sbjct: 204 ESFSAEEKKDENGQIYYEYEIDSAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRH 263

Query: 241 VHDSFKTVGSY 250
           VH+SFKT+GSY
Sbjct: 264 VHESFKTIGSY 265

[Close]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL
Match: A0A6J1H7M1 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460820 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 1.90e-139
Identity = 214/253 (84.58%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MATAIAPLAFLTS-TAASTGTTAPKPPQASSLPKPQIPILQSKP--PLSSSTAPISIAAT 60
           MATAI+PLAF ++  AA+TG   PKP Q   LPKP IP+LQS P  PLSS +APIS    
Sbjct: 1   MATAISPLAFFSAGAAATTGAIVPKPSQTPPLPKPLIPVLQSNPSGPLSSLSAPIS---- 60

Query: 61  AIAVAAILSTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKE 120
           AIAVAAILST PPSLAD G AFNVYYGTAASAANYGG GGNA+KKD+AEYIYDVPEGWKE
Sbjct: 61  AIAVAAILSTTPPSLADAGGAFNVYYGTAASAANYGGFGGNASKKDSAEYIYDVPEGWKE 120

Query: 121 RLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIA 180
           RLVSKVEKGTNGTDSEFYNPKKR EKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIA
Sbjct: 121 RLVSKVEKGTNGTDSEFYNPKKRKEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIA 180

Query: 181 SAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDML 240
           SAE   AEEKKDENGQ+YYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEW+RDQDML
Sbjct: 181 SAEGISAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWDRDQDML 240

Query: 241 RHVHDSFKTVGSY 250
           RHVH+SFKTVGSY
Sbjct: 241 RHVHESFKTVGSY 249

[Close]

BLAST of Cucsat.G3015 vs. TAIR 10
Match: AT3G63540.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62
Identity = 111/140 (79.29%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 110 DVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSD 169
           +V EGWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLTFLAG RQL P+DVILNNLALSD
Sbjct: 3   EVEEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLALSD 62

Query: 170 VNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPE 229
           V LQD IA A+  ++EE+KDE GQVYY+YEIDG G HSLI+VTC+KNKLYAHFVNAP PE
Sbjct: 63  VELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKLYAHFVNAPAPE 122

Query: 230 WNRDQDMLRHVHDSFKTVGS 250
           WNRD D L H+ DSFKTV S
Sbjct: 123 WNRDHDTLTHLRDSFKTVSS 142

The following BLAST results are available for this feature:

BLAST of Cucsat.G3015 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82658	7.2e-77	64.29	Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cucsat.G3015 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461279.1	6.93e-163	96.40	PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis melo] >KAA00...	[more]
XP_004135924.1	1.36e-161	97.60	thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis sativus] >KGN45140.1 hy...	[more]
XP_038896859.1	2.70e-160	93.60	thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_023547955.1	8.09e-143	86.45	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022991922.1	7.29e-141	86.06	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Cucsat.G3015 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG07	3.36e-163	96.40	Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CES2	3.36e-163	96.40	thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K624	6.59e-162	97.60	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428280 PE=4 S...	[more]
A0A6J1JN94	3.53e-141	86.06	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1H7M1	1.90e-139	84.58	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Cucsat.G3015 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63540.1	1.4e-62	79.29	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 104..245 e-value: 4.7E-11 score: 43.1
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 87..246 e-value: 1.7E-17 score: 65.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..44
None	No IPR available	PANTHER	PTHR31407:SF20	THYLAKOID LUMENAL 19 KDA PROTEIN, CHLOROPLASTIC	coord: 1..247
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..247
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 103..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3015.T1	Cucsat.G3015.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding