Cucsat.G2498 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTAAAAAGGGGGAAAATGAAAAAAAGAAAAAAGAGAAAGAGAAAAAGTAACCTCCAACCTAATTTTTAATCCCCACATACCATATTGTCCTGTATATATATGTGTGTGTGTGTGTGTGTAAGCATAGAAGTATTTACGTACGAATGGAATAATTAAATATTATATAAGTTTTAAAGAGATGGGGTTCCTCTGTTTTTTAAATTCACATAAGAGATTGTCACAATTTCGCCTTTAAAAATACATAGAGAGCAAACTTTTTTATGCTATAAATAGACACACCCTTCATTTCAGGTCTTATTCCTCACTGACTTTTGTTTAATTGGGGAGCAAGAGCAAGTTCAAGCTTAGAGATTAACAGAGAAACAGAGATGGTTTCTACATTACAAAAGAGATTCGACTCACGTAACAAGCTACGCCTTGTTCGATCTCTACCCACTTATGAATCCTCTGTAATTCCTAAAACATTCTTCTTCTTTTTTCTTTTTTCTTTTTTTGTTATGTTTTTTTTAATCATTCTTTTTTTTTTCCCCTGTCACTTCACCTTGTTTTGGCCATTAGTTCTAATCAAGTCTTCTGTTTATGTAGGGAAGACAGAGGTGTGTGTTTTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTACTCAAATCTACTGGACATGAAAAGAGAATATTTGAACTCAATAAAGCAATTTCATTCCTCCAAGGTCCTTTTTTCACCCCTCTTTCTGTCTCTTTAAACTATTGAAAGATATGATCTTTATAATGGGAACAAAGTAAATATAATGTTTTTATAAAAGCAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGGGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCATTTGAGAAAATGGGTCTTAATGTTGTTGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCACTGCTGTAGCTGAAGATCATCATCAATTGCTTAATCTCAGTGATATAACCGAAGCTATTAATGTAGCCATTGATCCCAAATTATTAGCTCCAAACCAGCATCATAATGACAGTATTCCTCACAATGATGCTCAACTTTATTAGTCACTTCCTAACCTATCAATTCAATGAAAATGTTTCTTCCATTCCAAATTCCAAACTCTCGTGTTTTTCTTTCGTTCTTTCTTTCTTTCCAATTATTCAAATTTGAAAAGAAAAAAAAAATATATATATATATATATATAGATTTGGCAATTCTTAA ATGGTTTCTACATTACAAAAGAGATTCGACTCACGTAACAAGCTACGCCTTGTTCGATCTCTACCCACTTATGAATCCTCTGGAAGACAGAGGTGTGTGTTTTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTACTCAAATCTACTGGACATGAAAAGAGAATATTTGAACTCAATAAAGCAATTTCATTCCTCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAGGGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCATTTGAGAAAATGGGTCTTAATGTTGTTGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCACTGCTGTAGCTGAAGATCATCATCAATTGCTTAATCTCAGTGATATAACCGAAGCTATTAATGTAGCCATTGATCCCAAATTATTAGCTCCAAACCAGCATCATAATGACAGTATTCCTCACAATGATGCTCAACTTTATTAG MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLDMKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVSCTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQLY Homology
BLAST of Cucsat.G2498 vs. NCBI nr
Match: XP_004134653.1 (uncharacterized protein LOC101213083 [Cucumis sativus] >KGN49320.1 hypothetical protein Csa_003445 [Cucumis sativus]) HSP 1 Score: 233 bits (594), Expect = 2.60e-76 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cucsat.G2498 vs. NCBI nr
Match: XP_008439723.1 (PREDICTED: uncharacterized protein LOC103484437 [Cucumis melo] >ADN34030.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 223 bits (569), Expect = 1.62e-72 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G2498 vs. NCBI nr
Match: KAA0052608.1 (uncharacterized protein E6C27_scaffold120G002160 [Cucumis melo var. makuwa] >TYK13219.1 uncharacterized protein E5676_scaffold255G008340 [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (569), Expect = 1.62e-72 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G2498 vs. NCBI nr
Match: XP_038893157.1 (uncharacterized protein LOC120082020 [Benincasa hispida]) HSP 1 Score: 192 bits (488), Expect = 3.27e-60 Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of Cucsat.G2498 vs. NCBI nr
Match: KAG6581368.1 (hypothetical protein SDJN03_21370, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154 bits (389), Expect = 1.72e-45 Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of Cucsat.G2498 vs. ExPASy TrEMBL
Match: A0A0A0KHW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519710 PE=4 SV=1) HSP 1 Score: 233 bits (594), Expect = 1.26e-76 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cucsat.G2498 vs. ExPASy TrEMBL
Match: A0A5A7UBN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008340 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 7.83e-73 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G2498 vs. ExPASy TrEMBL
Match: E5GC31 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 7.83e-73 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G2498 vs. ExPASy TrEMBL
Match: A0A1S3B049 (uncharacterized protein LOC103484437 OS=Cucumis melo OX=3656 GN=LOC103484437 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 7.83e-73 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G2498 vs. ExPASy TrEMBL
Match: A0A6J1IR65 (uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 1.26e-45 Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of Cucsat.G2498 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 3.8e-15 Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Cucsat.G2498 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06 Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Cucsat.G2498 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators ) HSP 1 Score: 46.6 bits (109), Expect = 1.6e-05 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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