Cucsat.G2471 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2471
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Squamosa promoter-binding-like protein
Location	ctg1002: 5537401 .. 5539539 (+)
RNA-Seq Expression	Cucsat.G2471
Synteny	Cucsat.G2471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAATTGCACCAAGAGGGTTAGAGATTCAAGTTCAAATCTCCATCTCCACCAAAGAATACTATAAATTCATTGGTAAGTTTTTTTTTAATAGTTTAATGAAGTGAATGATTGAATAAGACTCAAAAGAGAATCCTCCAAACTTAAAAAGCAATTCTTTAATTTTTGAAGAAGCAGCAACCACACAAGTGAAAGAAAAGAATAGCACTTGGACAAGGACACCAAATATATAGAAATATATACAATTAATCATTAATTAATGGATTAAATTAATTATATAAGGTTGAACTTTTTAATATATGTGTGTCTTTTAATTTTTTCTTTTTTTTTTTTTTTTTGGTAAGAAATAGAAAAAGTATTTAATAGATTTTTAAACATCTAATTTTCTAACCAAATATACTGAGGTATATATTTGTTCAAAAGAAATTGAAAGACTAGAAACCTATTATAGTAAAAAAAGAAAAAGCAAAGAAAAAAAAATACAAGGTGTGGTCTCTTTCATTCACTTTCATTTCCATTATAGTTTATATTATATATATAGTCATGTGGTTCTTCTAACTTGTTCTACACATATAAGACTTCTCTTAGAAAATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGATGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAAACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTAAGAAAGAAAGCTTCCTCTTTTTTTTTTTTCTCTCAAATAATTTTTTTTAAGAAAACCCTAATCTGGATCTCTTAAATTAGTATTGTTTTTTTAATCTTTATCAAAATGTTTCACTATTTATGGAATAAATCTAATATTCAAGTATTCTATTAAGGGGGAAGACATTTTAATTTCCATTTATACACTAAAGTGTTGAGTCAATTCTTTTTTGAATTTTCTATTGAACATGAAACATGTATAATTTAATATTATCTTTTTTGAAAAAAAAAAAGTTGTGTTTAATGGTGATTATGTCACCCAAATGGTTTTATTACCTATAGTAATTACTTTTCAATCAAGATAGTAAAATGCCCATTAATATAATAGTTATTGACTATCAATTTTATTTTTTTTAAAAAAGATTGACCTTCATTTTTAAGGTCTGAAGTTTTAACAAAGTACTGTTATATTATATATTCTTAATGGTTAATTAAGTTTGTTTAAATTAAAGTTGGTAAATTTGGATTTTTTTTTCCCTCTTGAATAGAGATTGAAAGGTTTTACATTATTGTTAAGACTAAATGAATCAATTTTAGTTGTAATAACTTTTAAATTCAAGTGGGTTTGAGTGAGTGATACAATTAATGCTATATTCTCACAGTGATTTTAAAGCTTTCGCTTTCTTAAAATTAGAGAACAATTGTGACATAGGGTTTTGTGTGATTGGTGAGGAACTATTCATTTTAGTGTTAACACTTTTAATTATGTTGGATACTTAAAATAGTTTGCTTCACAATAGAGTTAATTTAGTGGTCGAAAATATATTTGTTGGAAATTATTAGAATGTGAATAGGGTAGTTTTAATATAGTGACATTTTTTTTGAAATTATTATAAAAATAGAGGAAAATCTATTAAAATTTATTTTTGGCAAATAGTTCTACTTTTTTATTTTCTGTGATGTGCATATGAATTTCTCACTAGCTGTAGCCTATAACAATAATGGTGGAAAAATAAATTAGAGGGAAGTAAAATTGAAAATATGAAAGGGTGTGGAGGATTATATTAAATACGCATTAAATGTGAATTAAATATATTAGATGGGAATGGAAAAGGGAGATGGTTTAGTTGTATTATGATGACAGGTTTCATGCATTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGAACCACACACACTCTCACTGTGTCCACTAATTACCTAATTAATAATAAATAACAATAATGATACACTCATTACTAATGAAGAATAAGAAGAAGAAGAAGAAGAAAAGAAGAAAGAGCTGCTCGTTATTGGAGTTAATTTTGTGTTGAGAGAGAGTCACAGGTCATTCTGGTTATTCTGGTCACCAGTCACCGGCGGCCACCGTGATGAAAAATGAATTTTTATGCTTTCTCTCTTCTGTCATCAAAAGAAAACCCAATTTATAGCCCTCTTTGTAATCATAATAATAATAAGTAAATAGATAACAAAGAGATGATCAGATGGTTTATGGTACTTTTTGCCTCAGTCACATATCACTAAAATCTGTGTGGGATATCTTTCTTTCTTTTTCTTTAACATTGTAGCTGTAGGTTA

Coding sequence (CDS)

ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGATGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAAACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCATTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA

Protein sequence

MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILPDFHGQSSTN

Homology

[Close]

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 45  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 103
           G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSR
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

[Close]

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 45  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 103
           G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSR
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

[Close]

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 2.9e-16
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 33  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGL 92
           RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL
Sbjct: 170 RRSRPG-----ESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGL 229

Query: 93  EQRFCQQCSR 103
            QRFCQQCSR
Sbjct: 230 SQRFCQQCSR 234

[Close]

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.5e-16
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 55  RCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 103
           RCQA+GC ADL+ AK YHRRHKVC+FH++AA V+ AG +QRFCQQCSR
Sbjct: 206 RCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSR 253

[Close]

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 37  SGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF 96
           S L   RGGGGGG      C  DGC ADL+  + YHRRHKVCE HS+  VV+++G E RF
Sbjct: 96  STLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRF 155

Query: 97  CQQCSR 103
           CQQCSR
Sbjct: 156 CQQCSR 161

[Close]

BLAST of Cucsat.G2471 vs. NCBI nr
Match: XP_004134953.1 (squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical protein Csa_003123 [Cucumis sativus])

HSP 1 Score: 206 bits (524), Expect = 2.13e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG 60
           MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG
Sbjct: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG 60

Query: 61  CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR
Sbjct: 61  CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of Cucsat.G2471 vs. NCBI nr
Match: KAA0052677.1 (squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squamosa promoter-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 185 bits (470), Expect = 1.08e-58
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. NCBI nr
Match: XP_008439842.1 (PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo])

HSP 1 Score: 185 bits (470), Expect = 3.75e-58
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 172 bits (435), Expect = 7.80e-53
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG 60
           M NSEDQ WEDM+V++DDD++DNEEIGFV++ERRRRS LT  RGG GGGR TVARCQADG
Sbjct: 1   MTNSEDQVWEDMVVEEDDDNDDNEEIGFVEDERRRRSALTGGRGGSGGGRVTVARCQADG 60

Query: 61  CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           CNADL+ A+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  CNADLSCARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of Cucsat.G2471 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 138 bits (347), Expect = 1.94e-39
Identity = 67/104 (64.42%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQA 60
           M NS DQGW D + ++++++  +D++E+GFV++ER++R+ ++S+R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           D CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQQCSR
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 1.03e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG 60
           MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG
Sbjct: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADG 60

Query: 61  CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR
Sbjct: 61  CNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL
Match: A0A5A7UDV9 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007580 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 5.21e-59
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 1.81e-58
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 9.38e-40
Identity = 67/104 (64.42%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MANSEDQGWEDMIVDDDDDD--NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQA 60
           M NS DQGW D + ++++++  +D++E+GFV++ER++R+ ++S+R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           D CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQQCSR
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL
Match: A0A6J1EFR3 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433770 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 7.70e-37
Identity = 66/106 (62.26%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARC 60
           M +S DQGW    E+   +++++D+D++EIGFV +ER++R+  + +R G GGGR++V RC
Sbjct: 1   MEHSGDQGWGEPVEEEEEEEEEEDDDDDEIGFVKDERKKRA-ASGSRSGSGGGRTSVPRC 60

Query: 61  QADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           QAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQQCSR
Sbjct: 61  QADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSR 105

[Close]

BLAST of Cucsat.G2471 vs. TAIR 10
Match: AT1G02065.2 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-17
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 33  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGL 92
           RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL
Sbjct: 170 RRSRPG-----ESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGL 229

Query: 93  EQRFCQQCSR 103
            QRFCQQCSR
Sbjct: 230 SQRFCQQCSR 234

[Close]

BLAST of Cucsat.G2471 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-17
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 33  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGL 92
           RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL
Sbjct: 170 RRSRPG-----ESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGL 229

Query: 93  EQRFCQQCSR 103
            QRFCQQCSR
Sbjct: 230 SQRFCQQCSR 234

[Close]

BLAST of Cucsat.G2471 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-15
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 43  RGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102
           RGGG G    + RCQ +GC  DLT AK Y+ RH+VC  HS+   V +AG+EQRFCQQCSR
Sbjct: 61  RGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSR 120

[Close]

BLAST of Cucsat.G2471 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 77.0 bits (188), Expect = 9.6e-15
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 48  GGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 103
           G    V RCQ DGC  DL+ +K YHR+H+VCE HS+   V+++GLE+RFCQQCSR
Sbjct: 168 GQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSR 222

[Close]

BLAST of Cucsat.G2471 vs. TAIR 10
Match: AT1G27370.2 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 77.0 bits (188), Expect = 9.6e-15
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 48  GGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 103
           G    V RCQ DGC  DL+ +K YHR+H+VCE HS+   V+++GLE+RFCQQCSR
Sbjct: 168 GQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSR 222

The following BLAST results are available for this feature:

BLAST of Cucsat.G2471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YFT9	1.7e-16	65.52	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946...	[more]
Q0DAE8	1.7e-16	65.52	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q8GXL3	2.9e-16	61.43	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8...	[more]
Q0E3F8	6.5e-16	72.92	Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q0J0K1	1.1e-15	59.09	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Cucsat.G2471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134953.1	2.13e-66	100.00	squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical p...	[more]
KAA0052677.1	1.08e-58	88.35	squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squam...	[more]
XP_008439842.1	3.75e-58	88.35	PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]	[more]
XP_038880830.1	7.80e-53	81.37	squamosa promoter-binding protein 1-like [Benincasa hispida]	[more]
XP_023004048.1	1.94e-39	64.42	squamosa promoter-binding-like protein 3 [Cucurbita maxima]	[more]

BLAST of Cucsat.G2471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK74	1.03e-66	100.00	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE...	[more]
A0A5A7UDV9	5.21e-59	88.35	Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3AZN8	1.81e-58	88.35	squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4...	[more]
A0A6J1KYC6	9.38e-40	64.42	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114974...	[more]
A0A6J1EFR3	7.70e-37	62.26	Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Cucsat.G2471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02065.2	2.1e-17	61.43	squamosa promoter binding protein-like 8	[more]
AT1G02065.1	2.1e-17	61.43	squamosa promoter binding protein-like 8	[more]
AT2G42200.1	1.9e-15	58.33	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	9.6e-15	58.18	squamosa promoter binding protein-like 10	[more]
AT1G27370.2	9.6e-15	58.18	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 56..129 e-value: 4.6E-33 score: 113.4
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 53..130 score: 31.820858
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 46..117 e-value: 3.4E-34 score: 118.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 54..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..26
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 41..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2471.T4	Cucsat.G2471.T4	mRNA
Cucsat.G2471.T2	Cucsat.G2471.T2	mRNA
Cucsat.G2471.T6	Cucsat.G2471.T6	mRNA
Cucsat.G2471.T3	Cucsat.G2471.T3	mRNA
Cucsat.G2471.T5	Cucsat.G2471.T5	mRNA
Cucsat.G2471.T1	Cucsat.G2471.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding