Cucsat.G2216 (gene) Cucumber (B10) v3

Overview
NameCucsat.G2216
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionThioredoxin-like protein
Locationctg1002: 1281582 .. 1289293 (+)
RNA-Seq ExpressionCucsat.G2216
SyntenyCucsat.G2216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGCGTGAGTGCATGCCTCTAGTGTCAGCTTTTGGCAGTCCATTACTCCACATATCTTCTCGCGTTCTGCTTCGGAGATCCATGGATGGGCCTATCAAAAAGGATTTTCAAAATTAATTTACTAATGACGAATTGCAGAGTGAAAATTAGGAGATTGTTTTTTGCGAACCTTGAGGTACACATCGACGGCTCGGTAAACACCGTCATCGAAGAGTCTAGCCTGTTCAGGGAGAGAAATTGCGAGGTTGTAGAATCTTTCCGCCTTCAGATTGCCGTCTGAGGCAATCTCCGCGAGATATCCATCTATCAACTTACCGACGAGCATTAACGCTGGCGATCTGGTACCATCATCCTCGACTACAGCTTGATTAACTTCAGCTACCTCTGCATTTTTCTCTTCGAGTCCCTCTAAGAAGTAAGATAAGATCCTCTCTGCACAATCAACGTCATATAAGGTCTCGTTCAGATACGAATAGCTCGGAATTAGAAGATCGTCCAGTGTTGCTTGTTCCAGTTGCGATCCTATTTTCTTCTCTAAAGCAGCTTTGCAAACTTCCGAAGCATTCAATATATTGGCCGTCCGCAGTAGTCCGAAGAGGAACCTTGTTGCGGTTGGAGTTTTTGAGCTTTTCTCCAATGGAAGATTACTGATTATGGTCTCTAACAACTCCTTTTGATCAGTCTCCGTAGGCATACTAGAGGAAGAGGCAGATGGTAACGATGGCTTCCGGTTGGACCTGGATATACCTGGAATATATTTCTTAGCGTAGTTCATTAAACAGCTCTCAATAATCTCCGAGCTCACATCTCGATCTCTCATGGAGAAAATTAACCGCTTAAACAGAGGCAGACTGAGCTGGGCGAGATCCTCAAACCATGACCCTCCCTTGCTTCCTCTACCACCGCTCTTCTTTCGCCCTCCAGTTTCAATTCCGTTCCAAAGCATCTGCTTCGATTGATCTTGAGCGCTATTGGCTCCATCGCTGACTGGCCATCCAAACAAAGCTGGATCGGCGGATGGCGCTTTCGAAGCGATCGAATCGATACATCTCTGCGTAATGCTTAAGGTCTCGGCCAGAGGCATTACAGGCTCACAAGATTTCAGCGTTTTAATTGATTCTTTGATGCTTCTGAGTACAGTTTGGGAGAGATATTTTTCGGTTTTTGAGATTAGGTTTTCTACGCTGTACTCTTCCGTCATTTCCAGAAACTCTCCGGCGCAGCGGAGAGGAGCGACATTGGAAGAGTTGAGGTCGATCTTCACGCCGTAGCAGAATTTAGATGCCATTTCGAAAATATCAGAACCGCCGGGGAAATCAGAGAGCACTATATGGCAGTGATCTTCCTCACCTTCATCATCTTCTTCTTCGTCTTCGTCTTCTTCTTCCTGTTGCTCTGCTTCAGCGGTTTTATTTTGATTCTCTCTGGTAGGAGTAGAGCAATTTGCTTCTTGCTCGGTTATCAAATTGTGAAGCTTCCGGCTCTTTGACATTAGAGGAAACTGAAAATTTACAAACTATTAGCCCATAACTCAAGAGGAACAATCCGACACAACCAAATCAACCAAGGACAGAAAAGTAGTAGTCAAACAAAATTAGCAACAAGATTCAGGAGGCGACCTTATGGAGATGGAAAGCCATATCCTCCACTTCGATGACAATGTCGCTCGGTAAACCAGTGGTGCAGAACCTGTGAAAACAAAACCCAGAAAAGAAGTGTTGACATGAGAGCTTAAACCAAAGGTCTAAAAATGGGGAAGACATAATAACTCAGAACTCACCAAGCTTGCCTTTTGGAGCTGGGGTTCTCTGCAGGTGCAGCTTGTATTTCAGTAGCCATTTTCTGTACACTGCCACACCTCGAAGAAGAATCAGTCCCTGAAACTAGAAACCCAGATACATTTGTTGCACAGAAATCTGTGGGGGGGTTTGTTTAGAAGATAAACACAAAGAAACAAACGAACAAATGGAAAGAAGTGAGATCCTTTTAGGAGTGTTTTAGTATGGGTGAAATGGACTTGACTTAGGATCAAGGAAGAAGAAGATAAAAAGAAAAACAAGGAGTGATGGGGGGCAGAAAAATGTTTGGTTGTGCTTTAGCTGCTTGCGATTTCCTTTCTTCAGAAGAATAAATCTGACAATGGGGGGAGGAGCATCATCAAAAGGCGAAGAATGCTCAATGGGAATTAAAAAGGGTAATTAAAAAAAGAAAGAAAGAAAGAAAAACTCTTTTCTTCTCAGATCCGACAAATGGGGTTTCAACAAAATTTCTTTTTTCTTCGTTGCTCTCTTGGTCTACGAATCAGGTCAGAATCTCACCCACTCCAATTTTTAAAAACTTCCATCAAATTAAATTCATTCAATTCTTTTCTTTCTTTCTTCATCCTCAAATAATCTGAATTTTGGATATTTTCTAACTTCTTTCTATTCTCATAAAAAAAAAAAAAAAAAAAAAAAAGAGTTTCTTGCTTTGCTAGGACCCTAATTTCCAGACCGTCGGTTACATTTTATTTTGTTTTTTAATCATTTCAGCTTTGTTGTTTATTTATTTATTAACACAAAAGTTTTAGTTTCTATATTTCAAATAGAATATCCCTATATTATTACCCATTCTTTTCTTTTCTTTCTTTATTTATTAGTACATATGAATTATATTTTTGGAGAAGCATATAATATGCTTAGCATATGATTTTACAAAACATTTACTATTCAAAAATTGTACGTAGTTTACATTCAAGCTCCTAATATTTAGTAATTAACTATACTTTCATTTTTTGGTTTAGAAATACATCATTTAACACAAATTAAGAAACATAAATACAACTCTATTTTATCTTAGTTTTTAGATTATATACCGAGAAGAAAACTCTTGAATTATTTATAAATTTAATTTTGTTTTAGTTATTAATACATACTTTAGCTAAGCTATTCATAAATTGGTTACTTTCATAATTTATGACATTATAAATTGTACTTTTAAAAAATATAAATTAGAACTGTTTCTTCAAAAGTGAGTGAGGAGTAATTACTTAGAATACCAAAAAAAGAAACTCTTTTATTTCCATTAAACCAAATTGTCATTAACTTTTCGTAATGACTGGATCTAATAAAATCTTATTAGAAAGTTTCTTACCCAAAATTTCATTATATTATAATTATTAAAAAGATTCCATTCTTCAATTTCAGAAGAAGAATTTACATTTGGGAGAAAAAGATCAAGCTTGGATTCTGAGGTTCGTTTACTTGTAAATTGCAATCTTATCTCTTTCGTCTATTTTTGTGAAAATTAAATTTTATCAGAGTATGATATAAACTTTAGACACCACCATCTCCAATACTACTAAATGCATTGAGTTGAGTTAGAATTAGATAGGTAAAAAATTATATTTAAAACATTAACATATATATAAACATAGCAAATATAGGAAAGTTCTCATAGAATTGACAAGTTTTGCTATATTATCCACCTACTCTGCCTGTGCCGCTTCAACAAGCTCAATCTTTGTTTTATAAAATGAGATGGGAGTTTGGGTGAATGATCTCTCCTCCTCCTCCTGATACGTTGTTCTATAGAAAAGGGAATTAGATAGCTTTTTTCTAAAATAGGTTTGATAAGTAAAGAAAAATGGATAAAGAATCTTTGGGACAGCTCGTATGAGTTATGAATGGGCCTAAAGTGTAAGGGTGACCTCAGCAGGAGGGAATTACTCATAATAATGGCAAGCCTACCCAAATAAGATGAGATGAGACCTTAGGGCAATTCACCAATATAATGGGAATGGGAATGATGTGGGGTCATCCATATGTATTTTGTGAACCCTTTATGTATCCAAATATTTTGGATTTCAATCTCATTTTCTCTCCCAAAAATACTTTCTTCTACTTTTTAATTTTTCATTATAAGTTACAAAATAGAGAGATTATGTTATTTGTTGAGATATAAAAAAGAAAATTAGACCAATAATGGAGGTGTAATGTATTGGTAAGCAATGATGTGGATGTTAGAGAAAATGAAAAGAAAGGCGCATGGGGGTATTAATTACTATGTTGATTAAGGGGGCATATGTATTATTATTAATCATAAAATAGTAGAAACCATATGGGAAATACATAATTATGCAATGATTTCAACTTTAACATTATAAAATTGTAAAGAAGATTAGATTATATTTTGGTAGACAGACAAACCCCACTTACTTCTAAAAGTGAATCTTTTCCCTTAATTATTTTCCCTTTATTTTGGGGTTGGAAAATCTTGATTCAATTAAAATATGTATATACAAAAAAGAAAGAAGATTGCAGGAATGGTAAGAAGGGAATGAAGTAATAATTGAAACACATGGTTTGGATTTTGGATATGAAATTATAATAAGTCTCTAAGATGAGAAGGAAGACAAACAAAGACAATGTAATGCCAAATCTTTTTTTTTTTTTAGTTAAGAATAATCTAGTAGGTTTTTCTAGGTTTGTCTTTCACCCCCCATGTTAATCTTCAATCTAATTATTTGTTTAAGGGAATAATCAACTTATATTATCAAATTATAAATGTTTTTCTCTACTTATTAATTAACATAATTATATTTGCCTAATTAACCATGCTATTTTGAATTTATGTACTAAGTAGATAGGACAATGAATTTTAAGATATCTCGAATATTTTTATGCATTTTACTTCTTCTTTTAACTAAAATCGTAAAGATGAGATCAAGCCTTAAATCTCATGTTTTTAACAACATTGGTTCACAAGTGTTCTAATTTATTTAAAAGGGTTTATTAATTTATTACTTAAAGTTTTGTATTCCTTATTTTTATGAATAATTTGATAGAATTGAAAGTTGGAATGTTGAGTGGTAAATAAGTATCCTAACTCCGACGTTAGTGGTAATTTAAAAATGTGAAGTGGGCAAAGCACTTTTGAAAACAGGAGGAGGGGGAAAGGAAACGTAAACGTCCAAAGAGGCACAAACCCCCAAGAAATTCAGGTAAGTTATGGCCATTGAGGGGCACAAAATCCACAAAAATACACATTCTTTCATTACTTTAATTTATTTATTTATTCATACAAACCCACACTCATTTACTTTATTTATTTCATACCTAAGAATTAACCACGTAGCTCAACATATATAATCTTATATTTCATATTCAAAATGCTTTAATTTCAAATATACATATAAATATTATTATTGTTGTTGTTGATAAGCTTTGCTTTAACTGAAATACCTCCTTTTCTTTTTGGTATCGACTTTTGATATATATATAAAAAAAAAGATTTAGAAATGAGAGGAGAGATTAATGAAGAGTATATAGATATGGATGAAAAAGTGTATTTTGTTGGTAGTTTCTAGGAATGTATGAGGCAAATTAAACAAAGTTTAATGGATTATTTGAAGTAATGTGATAGAGATAAAAGGGGGCAGGGCATTAAAGTGAAGGGGCAGTGCACCCCCATCTATAGATGTTGGGGAGGGTGTTGCCCACATACATCTTAAGGGCTTTTTGTGGGTTGCTACTTGCTGGATTAACTGACCACATGGCTCCCAAGAAACTCTCTCCATATTCTTTGCTGCCTTTGCTTGCAATCCACAGCTCAACATTATACACCAACAACACATACATTATTATTGAATTTTAAAATAAAACAAGAATAGTTTTAAGTTAATTCGATGATCATTTTTGTTTCCGAGTTCTTAAGAATTTGTGCATTTATTTCTAAACCTCACAAAAGTGGGTCAATAATATAATATTTTGTGTTTTTTTTTTTTATAAAAAAAAGTTTTTATTAATTATGAACAAACACACCCCAACCCACAATACCCACAGTCACCCACATTTTCAATCCCAACCCCCACCTTCATCTTTAGCCCAGCCCACATCTCTTCTCAAGAATGGTTTATCAAATTGTTGGAAGCTCTGCACAAGTGATTGTCAAGAGTCTCAATAATCCTATTTCTCTCAGTATCCTTCTATTATGGTCGATTTGGATGCCAAAGAGGTGATGAACTGCTTCTCACCCTTTATTGAGTTAAATAATACATTAAATAAGATTAAATATATGTAAAACTAGGTATTGTTGTCATTAGTGAGTGTATTATAAGTTTCTTGTCATGCCTAAACCAATTATCTCAATTGAACCAAATTGGACTCATTTTTTTCTTCTTTTCAGATGTTTAATTGTGAATTTGTTTGCTCATAAGGTTAACTTTTGGGTAATGAATTAACTAAGCAAACTGCCTAATCCAAAGTGAAAAAGTCGAATGAAAAGATTTGAATGACTAAACTTATCTCGTTATGAACTCCCAAAACGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGTATGCTTCAATCTCTTCTCTTCTTATTGTTTTTGCTTAATTTTCTTCAATTATTGAGTCAACCATATTAGCCCTAATTCCCTGAAATCGAAACCAATTCAATTTTATTCTCGCTTTCAGGAAAAATCGTCGAACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCTATAGTTTCCACGGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGTTTGGAAATTTGGAATCTAATAGTTCTAGCAATCTCTTTGTTTTACATGATTATGATTTCACATTCTTCAAGTAATTAGAGCTCATGATGAAGATTCATATGATGATTCAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGTAATACTTTATGGAAATGCTTGTTTACAAGAATTTTTTGTTGTTTGAATTTAAGGAAGGTAAATAGATCTTTGTTCTTCCAGGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAATTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAACAAGTTGCCAATTCAAATACTCTTTGATAGGTATTCCAGATATAGTTAGTCCATCTTATACCATATATCCAATTGTTTATTGTACTATGGACATAACTTCTTCTCTTGATAGTAAATAAGTCTTTATTTCTTCTCTTGATTGTAAATATCTGCTTTTTTATGTTAACTACTGGTGGGTTTAATGATTAAAAGAACAAGTAACCAGGTTGAATCCTTCATATTTTTGTGGTGTTCTGCAATCTTTATTTACT

Coding sequence (CDS)

ATGATGAAGATTCATATGATGATTCAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAATTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAG

Protein sequence

MMKIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG
Homology
BLAST of Cucsat.G2216 vs. ExPASy Swiss-Prot
Match: Q7Y0D4 (Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767500 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNTKWEQELDEFGV
Sbjct: 134 EALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGV 193

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLDK+GNEEGNVVGRLP+QY L+NV ALA GE ++PHARVVGQFSSAE+RKVH
Sbjct: 194 EGIPHFAFLDKEGNEEGNVVGRLPKQYFLDNVVALASGEPTVPHARVVGQFSSAESRKVH 253

Query: 129 QVSDPRSHG 138
           QV+DPRSHG
Sbjct: 254 QVADPRSHG 262

BLAST of Cucsat.G2216 vs. ExPASy Swiss-Prot
Match: O23166 (Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF164 PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-63
Identity = 111/129 (86.05%), Postives = 125/129 (96.90%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+KD+VNFVMLNVDNTKWEQELDEFGV
Sbjct: 133 EALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGV 192

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLD++GNEEGNVVGRLPRQYL+ENV+ALA G+ SIP+AR VGQ+SS+E+RKVH
Sbjct: 193 EGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQYSSSESRKVH 252

Query: 129 QVSDPRSHG 138
           QV+DP SHG
Sbjct: 253 QVTDPLSHG 261

BLAST of Cucsat.G2216 vs. ExPASy Swiss-Prot
Match: P73920 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-27
Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 0

Query: 10  ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVE 69
           AL NG+PT+VEFYADWC  C+ +APD+ ++++ +   VNF MLNVDN KW  E+  + V+
Sbjct: 48  ALDNGRPTLVEFYADWCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVD 107

Query: 70  GIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH- 129
           GIPHF +LD  G      +G  P + L +N+ AL   E  IP+A V GQ S  E R +  
Sbjct: 108 GIPHFVYLDDTGTAIAESIGEQPLRVLEQNITALVAHE-PIPYANVTGQTSVVENRTIEA 167

Query: 130 QVSDPRSHG 138
             + PRSHG
Sbjct: 168 DPTSPRSHG 175

BLAST of Cucsat.G2216 vs. ExPASy Swiss-Prot
Match: P35088 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=txlA PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-24
Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 0

Query: 10  ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVE 69
           A++N +P ++EFYADWC  C+ +A  +  ++Q + DR++FVMLN+DN KW  E+ ++ V+
Sbjct: 53  AIANDRPMLLEFYADWCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVD 112

Query: 70  GIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVG---QFSSAEARK 129
           GIP F +L+ QG  +G  +G LPR  L  N+DAL   +  +P+    G   +FS+     
Sbjct: 113 GIPQFVYLNGQGQPQGISIGELPRSVLAANLDALVEAQ-PLPYTNARGNLSEFSADLQPS 172

Query: 130 VHQVSDPRSH 137
               +DPRSH
Sbjct: 173 RSSQTDPRSH 181

BLAST of Cucsat.G2216 vs. ExPASy Swiss-Prot
Match: P12243 (Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trxA PE=3 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           + L +  P +V+F+A WC  CR +AP V ++ QQ+ D+V  V +N D         ++G+
Sbjct: 15  EVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDEN--PSVASQYGI 74

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVD 102
             IP    + K G     VVG +P+  L   +D
Sbjct: 75  RSIPTL-MIFKDGQRVDTVVGAVPKTTLANTLD 104

BLAST of Cucsat.G2216 vs. NCBI nr
Match: XP_016899240.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 279 bits (713), Expect = 1.16e-92
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 138 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 197

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 198 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 257

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 258 EARKVHQVSDPRSHG 272

BLAST of Cucsat.G2216 vs. NCBI nr
Match: XP_008440187.2 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 279 bits (713), Expect = 2.23e-92
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 158 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 217

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 218 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 277

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 278 EARKVHQVSDPRSHG 292

BLAST of Cucsat.G2216 vs. NCBI nr
Match: XP_016899239.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 279 bits (713), Expect = 3.41e-92
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 171 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 230

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 231 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 290

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 291 EARKVHQVSDPRSHG 305

BLAST of Cucsat.G2216 vs. NCBI nr
Match: XP_004141943.1 (thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus] >KGN48468.1 hypothetical protein Csa_002766 [Cucumis sativus])

HSP 1 Score: 268 bits (685), Expect = 1.37e-88
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV
Sbjct: 131 EALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 190

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH
Sbjct: 191 EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 250

Query: 129 QVSDPRSHG 137
           QVSDPRSHG
Sbjct: 251 QVSDPRSHG 259

BLAST of Cucsat.G2216 vs. NCBI nr
Match: TYK12934.1 (thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (685), Expect = 1.90e-88
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV
Sbjct: 141 EALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 200

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH
Sbjct: 201 EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 260

Query: 129 QVSDPRSHG 137
           QVSDPRSHG
Sbjct: 261 QVSDPRSHG 269

BLAST of Cucsat.G2216 vs. ExPASy TrEMBL
Match: A0A1S4DU52 (thioredoxin-like protein HCF164, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 5.60e-93
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 138 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 197

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 198 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 257

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 258 EARKVHQVSDPRSHG 272

BLAST of Cucsat.G2216 vs. ExPASy TrEMBL
Match: A0A1S3B047 (thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 1.08e-92
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 158 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 217

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 218 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 277

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 278 EARKVHQVSDPRSHG 292

BLAST of Cucsat.G2216 vs. ExPASy TrEMBL
Match: A0A1S4DTC4 (thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 1.65e-92
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 3   KIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 62
           +IHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE
Sbjct: 171 EIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQE 230

Query: 63  LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 122
           LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA
Sbjct: 231 LDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSA 290

Query: 123 EARKVHQVSDPRSHG 137
           EARKVHQVSDPRSHG
Sbjct: 291 EARKVHQVSDPRSHG 305

BLAST of Cucsat.G2216 vs. ExPASy TrEMBL
Match: A0A0A0KG26 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G488380 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 6.61e-89
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV
Sbjct: 131 EALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 190

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH
Sbjct: 191 EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 250

Query: 129 QVSDPRSHG 137
           QVSDPRSHG
Sbjct: 251 QVSDPRSHG 259

BLAST of Cucsat.G2216 vs. ExPASy TrEMBL
Match: A0A5D3CPH8 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005290 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 9.19e-89
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV
Sbjct: 141 EALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 200

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH
Sbjct: 201 EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 260

Query: 129 QVSDPRSHG 137
           QVSDPRSHG
Sbjct: 261 QVSDPRSHG 269

BLAST of Cucsat.G2216 vs. TAIR 10
Match: AT4G37200.1 (Thioredoxin superfamily protein )

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-64
Identity = 111/129 (86.05%), Postives = 125/129 (96.90%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           +ALSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+KD+VNFVMLNVDNTKWEQELDEFGV
Sbjct: 133 EALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGV 192

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH 128
           EGIPHFAFLD++GNEEGNVVGRLPRQYL+ENV+ALA G+ SIP+AR VGQ+SS+E+RKVH
Sbjct: 193 EGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQYSSSESRKVH 252

Query: 129 QVSDPRSHG 138
           QV+DP SHG
Sbjct: 253 QVTDPLSHG 261

BLAST of Cucsat.G2216 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08
Identity = 24/93 (25.81%), Postives = 50/93 (53.76%), Query Frame = 0

Query: 9   QALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGV 68
           + L +  P +VEF+A WC  CR + P V ++ + F  +  F  +N D +      + +G+
Sbjct: 99  KVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES--PNTANRYGI 158

Query: 69  EGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVD 102
             +P    + K G ++ +++G +PR+ L + ++
Sbjct: 159 RSVP-TVIIFKGGEKKDSIIGAVPRETLEKTIE 188

BLAST of Cucsat.G2216 vs. TAIR 10
Match: AT2G47470.2 (thioredoxin family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.0e-08
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0

Query: 11  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEG 70
           L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++GV G
Sbjct: 156 LDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSG 215

Query: 71  IPHFAFLDKQGNEEGN 87
            P   F  K  N+ G+
Sbjct: 216 FPTLKFFPKD-NKAGH 230

BLAST of Cucsat.G2216 vs. TAIR 10
Match: AT2G47470.1 (thioredoxin family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.0e-08
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0

Query: 11  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEG 70
           L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++GV G
Sbjct: 156 LDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSG 215

Query: 71  IPHFAFLDKQGNEEGN 87
            P   F  K  N+ G+
Sbjct: 216 FPTLKFFPKD-NKAGH 230

BLAST of Cucsat.G2216 vs. TAIR 10
Match: AT2G47470.3 (thioredoxin family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.0e-08
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0

Query: 11  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEG 70
           L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++GV G
Sbjct: 156 LDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSG 215

Query: 71  IPHFAFLDKQGNEEGN 87
            P   F  K  N+ G+
Sbjct: 216 FPTLKFFPKD-NKAGH 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7Y0D41.2e-6589.92Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica O... [more]
O231661.9e-6386.05Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
P739202.9e-2746.51Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PC... [more]
P350888.7e-2440.00Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC ... [more]
P122431.3e-0832.26Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 G... [more]
Match NameE-valueIdentityDescription
XP_016899240.11.16e-9299.26PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis me... [more]
XP_008440187.22.23e-9299.26PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis me... [more]
XP_016899239.13.41e-9299.26PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucumis me... [more]
XP_004141943.11.37e-8899.22thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus] >KGN48468.1 hyp... [more]
TYK12934.11.90e-8899.22thioredoxin-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A1S4DU525.60e-9399.26thioredoxin-like protein HCF164, chloroplastic isoform X4 OS=Cucumis melo OX=365... [more]
A0A1S3B0471.08e-9299.26thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucumis melo OX=365... [more]
A0A1S4DTC41.65e-9299.26thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucumis melo OX=365... [more]
A0A0A0KG266.61e-8999.22Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G488380... [more]
A0A5D3CPH89.19e-8999.22Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
Match NameE-valueIdentityDescription
AT4G37200.11.4e-6486.05Thioredoxin superfamily protein [more]
AT3G15360.15.2e-0825.81thioredoxin M-type 4 [more]
AT2G47470.29.0e-0836.84thioredoxin family protein [more]
AT2G47470.19.0e-0836.84thioredoxin family protein [more]
AT2G47470.39.0e-0836.84thioredoxin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 121..234
e-value: 1.7E-26
score: 94.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..87
NoneNo IPR availableCDDcd02950TxlAcoord: 117..258
e-value: 3.67638E-85
score: 248.405
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 129..223
e-value: 4.0E-20
score: 71.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 78..227
score: 15.632377
IPR044241Thiol:disulfide interchange protein TxlA/HCF164PANTHERPTHR47353THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTICcoord: 1..259
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 129..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G2216.T11Cucsat.G2216.T11mRNA
Cucsat.G2216.T9Cucsat.G2216.T9mRNA
Cucsat.G2216.T5Cucsat.G2216.T5mRNA
Cucsat.G2216.T8Cucsat.G2216.T8mRNA
Cucsat.G2216.T3Cucsat.G2216.T3mRNA
Cucsat.G2216.T1Cucsat.G2216.T1mRNA
Cucsat.G2216.T2Cucsat.G2216.T2mRNA
Cucsat.G2216.T6Cucsat.G2216.T6mRNA
Cucsat.G2216.T7Cucsat.G2216.T7mRNA
Cucsat.G2216.T4Cucsat.G2216.T4mRNA
Cucsat.G2216.T13Cucsat.G2216.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010190 cytochrome b6f complex assembly
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor