Cucsat.G21258 (gene) Cucumber (B10) v3

Overview
NameCucsat.G21258
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUbiquitin
Locationctg910: 94287 .. 96285 (+)
RNA-Seq ExpressionCucsat.G21258
SyntenyCucsat.G21258
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGCAAAGTTTGAGGCGGCATTTTTAATGCTATATATAGAGAGAGAGGCAGAAAAAAGTCGGAAACGTAAAACCCTCAAACTCATCAAGGAGGCGCCGAGGAAAACTAGAGGATCAAGAAAATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAGTCCAGCGACACCATTGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGTACGTCTTTTTTTTTCCTTCATATTTTTCATTTCTTACTCTATCTATTGTTTATCTTGATTTATGCTGCAAACTCTTCAGGTATTCCCCCCGATCAGCAACGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTGGCCGACTACAACATCCAGAAAGGTATATTTTACTTACATTTTAGGTAGCCTACGAAGTAGACGAGATGAATTTAGCTGAAATCAATACTGTAGACTCGCCTGGTGTTGTTGTTCGTTTTCCTATTCCCTTAGTCTTTGAACGATACTGGAATAGGACTCCGGACCATGAGTTTTGATGAGTTAGTCGTCAATTTTAGAGACGTCAAAGACCGTACTGGTCTTCATCTTAAAATTTTAGAGGCGTTAATGTTGAATGAATGACATTCTTTGAGATTGGGTGGTTGCTTAGAAATTTCTGTTGGTGTCTGATTGATTTCAATTGCTGTCTTTTATACGAAATTTGTAGTGTCAAATTTGTAGTGTCAAGTGGAATGTCATAGAAACATGTGGCTTTTAGAGTTGGCTGATTAGTAATTCAAGGACATTCTTGCACTTTTGCCTATAAATACATGAACTACTTTTTGAATGAACTATAGTTTTCTTTGCGTTTTCATTATTAGATTAAATGTACGATATCGTTTATGTTTGTTCAGAGTCAACACTGCATTTGGTTCTAAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATACAACCAGGACAAGATGATCTGCCGCAAGTAAGTTATTTTTTGTTCTTGGTATTTTCTCATTCTAGGACTGCTGATATATCTTATCGTACATGAACTGATACAACTAAGATTTCAACCTGACTGGTCTGTTCAGTTTTTTAATTTCCTTTTTTCTGTTTTCTGGTTTGAACTTTGGTTTGGTTTGATTTGAATAACTGAACGAATAATTTCATTTCGGTTGGGAAAATTTTAATAGTAAACTGAAAATCCAATGTGTTTAAGTTTTTTCTTATTATCAGTTTGATTTTGTTGTAACATGAAGATTTTCACGCCGGACAGAAATTGGCCAAGCCGTATCAGAATGAGCTTACTCCCAATTGAAACTCTGAACTTTGATACTTTTTATAAAAAGTTTGAACAATAACTTATTTTTCATTTTGGAAATTGATTTTTTTGGTTGTGATATGGTTTGACCTCCCGTCCAGAACAGAGAATGTTTTTCTAAAGTTTTTTCTTCTTTCTTGGCACACAGATGTTATGCACGCCTGCATCCCCGTGCTGTCAACTGCCGTAAGAAGAAATGTGGTCACAGCAATCAGGTAAAAGGATATCAACATTGATAACTCGGTTGATTTCATTCTTTTCTAAAATCGTGTGCATGATGTGCCTGCCAGTTTTGGAATTTTATTTTGGTTTACCGTTGGATTGAATGTGATTCGTTGAATTGCAGCTGAGGCCAAAGAAGAAAATCAAGTAGACGGCTGATCTTAAGGATGAAATGTTGTGGTTCCTTATATATCACTTCAATGCGCTCTGTAGAGTCTTAGATTATGTGCCCGTTTGTTAAGGATTCAATTTTGTAGTTCGGACTTCAGAACTTTTGTTGCATTACATTGATTATGAGATGGTGTTGTTTTCTTTTTGAATCTATTTTATTGATGAAACGTGTTAATTTGTTTTTCTCACATCAGTATCCAATTTGAACTCAACTAACAGCCCTTGTGAGCTATAATCACCAGCTTCTCCTAGGGCGCCTCTTGGTGCAGCCAAGTTTACCTGATTTTAAACAAAGAGTTTAATAAAGGAAAACGTGCATGT

Coding sequence (CDS)

ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAGTCCAGCGACACCATTGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGTATTCCCCCCGATCAGCAACGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTGGCCGACTACAACATCCAGAAAGAGTCAACACTGCATTTGGTTCTAAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATACAACCAGGACAAGATGATCTGCCGCAAATGTTATGCACGCCTGCATCCCCGTGCTGTCAACTGCCGTAAGAAGAAATGTGGTCACAGCAATCAGCTGAGGCCAAAGAAGAAAATCAAGTAG

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Homology
[Close]
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match: P49636 (Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-7 PE=2 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 4.9e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 97

[Close]
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match: B9DHA6 (Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana OX=3702 GN=RPL40A PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-47
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 98
          IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICR 97

[Close]
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match: P0CH34 (Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-47
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 98
          IQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICR 97

[Close]
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match: Q42202 (Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana OX=3702 GN=RPL40B PE=2 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-47
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 98
          IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICR 97

[Close]
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match: P0CH35 (Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-2 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-47
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR 98
          IQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICR 97

[Close]
BLAST of Cucsat.G21258 vs. NCBI nr
Match: KJB36337.1 (hypothetical protein B456_006G153300 [Gossypium raimondii])

HSP 1 Score: 196 bits (498), Expect = 6.75e-63
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI 100
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI 100

[Close]
BLAST of Cucsat.G21258 vs. NCBI nr
Match: XP_031116062.1 (ubiquitin isoform X4 [Ipomoea triloba])

HSP 1 Score: 193 bits (491), Expect = 5.76e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. NCBI nr
Match: XP_031116061.1 (ubiquitin isoform X3 [Ipomoea triloba])

HSP 1 Score: 193 bits (491), Expect = 7.18e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. NCBI nr
Match: XP_031116060.1 (ubiquitin isoform X2 [Ipomoea triloba])

HSP 1 Score: 193 bits (491), Expect = 7.65e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. NCBI nr
Match: PHT40955.1 (Ubiquitin-60S ribosomal protein L40-2 [Capsicum baccatum])

HSP 1 Score: 193 bits (491), Expect = 1.71e-61
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match: A0A0D2NT48 (Ubiquitin OS=Gossypium raimondii OX=29730 GN=B456_006G153300 PE=3 SV=1)

HSP 1 Score: 196 bits (498), Expect = 3.27e-63
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI 100
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI 100

[Close]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match: A0A1U8NU10 (Ubiquitin OS=Gossypium hirsutum OX=3635 GN=LOC107951714 PE=3 SV=1)

HSP 1 Score: 194 bits (492), Expect = 2.02e-62
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNL 99
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN+
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNM 99

[Close]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match: A0A2N9IYR1 (Ubiquitin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57924 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 3.37e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match: A0A2G2W6U8 (Ubiquitin OS=Capsicum baccatum OX=33114 GN=CQW23_19809 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 8.27e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98
          IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRN 98

[Close]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match: A0A2P2ME75 (Ubiquitin OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 1.95e-61
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRNLI 100
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICR  +
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKYV 100

The following BLAST results are available for this feature:
BLAST of Cucsat.G21258 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P496364.9e-48100.00Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-... [more]
B9DHA61.9e-4798.97Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana OX=3702 GN=RPL40A ... [more]
P0CH341.9e-4798.97Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q422021.9e-4798.97Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana OX=3702 GN=RPL40B ... [more]
P0CH351.9e-4798.97Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
BLAST of Cucsat.G21258 vs. NCBI nr
Match NameE-valueIdentityDescription
KJB36337.16.75e-63100.00hypothetical protein B456_006G153300 [Gossypium raimondii][more]
XP_031116062.15.76e-62100.00ubiquitin isoform X4 [Ipomoea triloba][more]
XP_031116061.17.18e-62100.00ubiquitin isoform X3 [Ipomoea triloba][more]
XP_031116060.17.65e-62100.00ubiquitin isoform X2 [Ipomoea triloba][more]
PHT40955.11.71e-61100.00Ubiquitin-60S ribosomal protein L40-2 [Capsicum baccatum][more]
BLAST of Cucsat.G21258 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0D2NT483.27e-63100.00Ubiquitin OS=Gossypium raimondii OX=29730 GN=B456_006G153300 PE=3 SV=1[more]
A0A1U8NU102.02e-6298.99Ubiquitin OS=Gossypium hirsutum OX=3635 GN=LOC107951714 PE=3 SV=1[more]
A0A2N9IYR13.37e-62100.00Ubiquitin OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57924 PE=3 SV=1[more]
A0A2G2W6U88.27e-62100.00Ubiquitin OS=Capsicum baccatum OX=33114 GN=CQW23_19809 PE=3 SV=1[more]
A0A2P2ME751.95e-6197.00Ubiquitin OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0391046-PhosphogluconolactonasePANTHERPTHR110546-PHOSPHOGLUCONOLACTONASEcoord: 69..122
NoneNo IPR availablePANTHERPTHR11054:SF226-PHOSPHOGLUCONOLACTONASE 3, CHLOROPLASTICcoord: 69..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G21258.T11Cucsat.G21258.T11mRNA
Cucsat.G21258.T18Cucsat.G21258.T18mRNA
Cucsat.G21258.T2Cucsat.G21258.T2mRNA
Cucsat.G21258.T3Cucsat.G21258.T3mRNA
Cucsat.G21258.T20Cucsat.G21258.T20mRNA
Cucsat.G21258.T14Cucsat.G21258.T14mRNA
Cucsat.G21258.T12Cucsat.G21258.T12mRNA
Cucsat.G21258.T6Cucsat.G21258.T6mRNA
Cucsat.G21258.T4Cucsat.G21258.T4mRNA
Cucsat.G21258.T5Cucsat.G21258.T5mRNA
Cucsat.G21258.T21Cucsat.G21258.T21mRNA
Cucsat.G21258.T1Cucsat.G21258.T1mRNA
Cucsat.G21258.T15Cucsat.G21258.T15mRNA
Cucsat.G21258.T16Cucsat.G21258.T16mRNA
Cucsat.G21258.T10Cucsat.G21258.T10mRNA
Cucsat.G21258.T13Cucsat.G21258.T13mRNA
Cucsat.G21258.T8Cucsat.G21258.T8mRNA
Cucsat.G21258.T9Cucsat.G21258.T9mRNA
Cucsat.G21258.T7Cucsat.G21258.T7mRNA
Cucsat.G21258.T23Cucsat.G21258.T23mRNA
Cucsat.G21258.T22Cucsat.G21258.T22mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006412 translation
biological_process GO:0019941 modification-dependent protein catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009051 pentose-phosphate shunt, oxidative branch
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0009536 plastid
molecular_function GO:0017057 6-phosphogluconolactonase activity
molecular_function GO:0003729 mRNA binding
molecular_function GO:0031386 protein tag
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding