Cucsat.G21222 (gene) Cucumber (B10) v3

Overview
NameCucsat.G21222
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionLuc7-like protein 3
Locationctg910: 3770389 .. 3774912 (-)
RNA-Seq ExpressionCucsat.G21222
SyntenyCucsat.G21222
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCATCACCATGGATGCCCAAAGAGCTCTTCTGGATGAACTCATGGGTTCAGGTTCTCCTCTGATTAAACTTTTTTTCTTCTTTGGATTTTTTTTTTCCAATTTGATGTATTGTTATGATTATTGATTTTACGGATTATCTAGTTGGAGAGGAATAAAGTTGTCTTTATTAGTTTTGAGGAATTTGGAAGGAAATGTGGGGGTACTATCCATCAGCCGTTCAATTTTTCACACAATGCTTCCCTTTTGTAATATGGGATTTCTAATTTGTAATCTTCTTTTTCGTTTTCTTCACATCTATTGTTGTCATTTGATTAGTTTTGGTGCGTTCTTGTATTATCGTGTGGCCTTTGAAATTTCCTTGGTGAGAATTGTCTTTGGTTCAAATGAAGTGACTTAATTTTGTATCTGTTTTGGTTTTGTAGCGCGTAATTTAACGGAGGAAGAACGAAGAGGATACAAGGAAGTTATGTGGGATGATAAGGAGGTCTGCGGGTTCTATATGGTTCGGTTTTGCCCACACGATCTTTTCGTAAATACTCGGAGCGACCTAGGTGGGTATTTTTCTTTTTTTATGTTAAAAGCATTACTCTGGTCTCTGAAATATCTAAGTGAACAAAGTCAAATAAAGCGAAATCAGTAGCAGATTTTGAGGATAATGGTAAAATGCTTATTCTGTGTATGTTCTTATGTGCTGTTTTATTGCTTCTCAATGTTTATTCTTATCTGATAAGATTGTAATTTGCGTTTAATAGGTTTACTTATAAATAGTAAATGTAAATAAATGTTATTTTATGTTTATCCTTTCCTTGCAGACTTTTTTTTTTTTTTCAATAAGAAACATTTTCCTTGCAGAGCTTTGGTTTATAATATTTAGGAAGAGTAATTTGTTTCTAAGATTGAATTCTTATTTCTGCTTTTTGGATCAGGTCCTTGTACTAGGATACATGACCAGAAATTGAAAGAAAGGTGACAACCAAACCAAGTTCCAAATTTGATTTCTTGTATAACCCTGCTAGCATCGTGAATTTCATATTCTTTATGTACTTGATTTAGTAATTGCTCTTGCTCGTGTTACAAACTAAGCTTCTGTTTTAAATATTTATATTTGGACTATTCTCTTTAAAGGTCTGCCGATTGCACTAGCTATGTTCTGGGAAAATATTAAATAACAATATTTGGTGGGTTATCTTTTTTCATGAGTGGTGATTGTCTATTGTTTTATACATCAACGTTCCAGTTTACTGTTTGTAATGTAGTTTTATAAGTATCACCATATGGTCTTCTCTTAATAAAAAAGAGTATTTTATTGCGAGACATGTGGTTTATTTTCGATTGGAGCAATGTGGATTATGTATTTTCAATCTTCATGAAATATCTTGCTGATTTCTTTGCATAACTCATAAGTATCACAACATTTTTATGGATAAAAGGGCTTCACTTTACTAATTTCTCTTAAATATGAGGAATGTTCTTGAAAGGAAGTAATCTTCTTGGACATCTTGAAGCATTGCTTAGCTTACTGGTTTGCTTATTTTGAGCATATCTTTTGGTCTTTCAGGACTCAAAAAATTTCTTCAGGTTTTTATTTTTCGACATGTGGAATAAGTTAATGCATGTCTCACTTTGAAATATGAATAAAAGGATTGACTGTTAACTGTAGCTATAATAGAAATGCACAATCTTTCATCTTTTACTAATGTTTTCCTAATTTTATTTTTAAATATTTCAGCTTTGAGAAGTCACCCAGGCATGATGCTTATGTTCCCAAATTCGAGGCTGAACTTGCTCAGTTCTGCGAGAAATTGGTTAGTGCTATATGTTTAAGATTGATGCTGTAGGTGTGATGTCTGTACTCATCTTTCTTTTTTTTGTCTAATGGGAACTAAAATTACTTAAACAGGTAATGGACTTGGATCGACGTGTTAGGCGTGGAAGAGAGCGTCTTGCTCAAGAGGTTGAACCTGCACCACCAACTCCATTGTCAGCCGAGAAGTCAGAGCAATTATCTGTACTGGAGGAAAAAATAAAGAATTTATTGGAACAGGTGGAGGCTCTTGGTGAGGCGGGTAAAGTGGATGAAGCTGAAGCGCTGATGAGAAAGGTACTTACACAAGTCGGGTTCCCTTAAGCACACCTAGACATTATCTGCTTAAATGAGGAGCAATTCCAGAATCGCTCTAATTAAACACTGGCATAACTCACAATTTCACAATGTCGGTATTCTTTAGTGTATGTTGATCACATTCCACGAATTGAAAATAGCACATGTCAAGAACTACTCTATCCCAAAAAAAAGAAGAAGAAAAGATTCATGAACCACTAAATTAGTCAGTAGGAGATAGAAGCAGTTATTTATATTGGTCTTTTTTTGTCGTCCTTTCAGGTTGATTTACTTAATACTGAGAAAACAGCCTTGACTCAACAAACCCAAAATGATAAGGTATTGATGCTCGCTCAAGAGAAAAAAATGGCCCTTTGTGAGATATGTGGTTCTTTTCTTGTAGCAAATGATGCTGCAGAGAGAGTCCAGTCTCATGTCACGGGTAAGCAGCATGTTGGTTATGGTATGGTCAGAGATTTCATCTCCGAGCACAAGGTAAGGTGTTCCTAAAACTAAATGAAAGTTGTTCAATCATTTTTCTTTTGATGAAATATGTTCAAGTGGGTGTCACCTGACAGGAAGCAAAAGAGAAAGCAAGGGAAGAAGAAAGACTAGCTAGGGAGAAAGAGGCAGAAGAACGGAAGAAGCAGAGAGAGGAGTTTGAGAGAAGAAAGAGAGGTGACTCTAGCGAGGACAAATATCGTGACAGAGAGCGAGACAGGGATCGGAATAGGTATCGGGAACGAGACCGCGATCGTGAAAGGTCTAGAAGAGGTGGCCGTGATGAAATAAGAGGAATGGATTGGAGGTCTAGGAATGGAAGAGATGGAGGCAGGGATAGGTATCGTGATCGGAGCAGGTCAAAATCCCCCATAAGACGTGGTCACAGGAGATCATCTAGGAGTCCATTGCGGCCATAATTATGAACTATGTTAAGAGGTCTGAGCTTTGGGACTAAATGAGGTAGATCTCTACATGTTCGAAGCTTATGAATGTATGCTTTGGTACCTCAAGTTACTTTGTTAGTATTGGTGAAACTTTTTTTGCTATCTCACAGCTGTGTTGACTGTATCATCTCCCTTTCATCATTATTATTAGAGGAGAACAGGGTTGAGGTAGGTATTTTTTTTTTTTTTTTGCGACTCTTCTTCAAGTATAGTTTGACTTTTGATTTGCACATTTCTTTTATAATAGATTCTTATAAAAGACAGTTCAATGTCTCTCCTACTTTTTTCATATTGGGTGAGCTTGCACAACTCTGGTGTTTGTCACATGTTTAATAGGCCAGGACAAAATATTTGCATATTCTACTGCTGAGAGGGCTGACGTTTATTTTCTCATTTTTGAGGTAACCTTATACATCTTGTCTCTTTCTTTAGACCATGATCAACATTTCATGTTATCAACCCTGCATTTGAGGTGTGCTTGGGTCTCAAATGATGTATATGTTTTTAGTGAGTGCTTATTTATTGCCCATGTTTGTTGATGTATTTCTATTATCTGGTGTTGGAGTATCGAATCTAGGGAAATGTGGGTAGTATTAGCATTGTGGTGGAACATGCCTTGTTCTTTTTTTAGTAGAAAGGAAGTTTGTATAACATAAATGGAGCTCGATAATCCCTACTAAAAGGAGGTGTAACTTTTATTGAGTACAGTGCTTTCCTCATCAAAATTCTGGTTTCGTGAAAGAAGTGGGAAGAAGTATGAGATAGCATCATGAAATGCGCAACTCTTTGTGTGATGTTTGAAGGTACAATTTGACTGCTAATCTGTAAAATAGCATGATCTTTAATCCATACAGTTTGCAGGAAGTGTATTGGCCAAATTTTTTGCTTGACTACCAGTGGGACAAACGTACTTGGTAAGGAACAATTCGTGCAGGGAATTTATTTTGCTGAACCATTTGAATCCACCAATATGGTAATTTTGCTGAACCATTTGAATGCACCAATATGGTCATTTACACAATCATTTGATTCGAGTCGATATGGGGTATATTTTCAAAATCAATGCAATGCTCAATTCTTTCAGAACTTTTGGATAGATATAGGTTCTACATTTGGTACTTGCTGATGTTTTTGAAGTTAATCCCCTTAATTATTTGGAACGCTGCGGTCAAGTTAACAGAGAGATGTCACTTTCCTTCTTCTCAAGCTTTGTCTCTACTTGCTTATCCGTCTATCGTCATCGTCTAAGGCCAGATGGTTGATTTTTTTGTTCTTAAATATAGAAAATTCAGATTGTGAGATACTTTTAAACAAAGCAATCTATCAAGCTGGATTGCCAAAGCTTGAACGTTGATGACATTCATATTTGGAAAGCTATAACTTTGCAAGATGCCTCTAAACTATACCATACATTTTTAACCCATTTGTACATTTGATTTCATGAGTAATATTAATGTTAAACAAACAAAACT

Coding sequence (CDS)

ATGTGGGATGATAAGGAGGTCTGCGGGTTCTATATGGTTCGGTTTTGCCCACACGATCTTTTCGTAAATACTCGGAGCGACCTAGGTCCTTGTACTAGGATACATGACCAGAAATTGAAAGAAAGCTTTGAGAAGTCACCCAGGCATGATGCTTATGTTCCCAAATTCGAGGCTGAACTTGCTCAGTTCTGCGAGAAATTGGTAATGGACTTGGATCGACGTGTTAGGCGTGGAAGAGAGCGTCTTGCTCAAGAGGTTGAACCTGCACCACCAACTCCATTGTCAGCCGAGAAGTCAGAGCAATTATCTGTACTGGAGGAAAAAATAAAGAATTTATTGGAACAGGTGGAGGCTCTTGGTGAGGCGGGTAAAGTGGATGAAGCTGAAGCGCTGATGAGAAAGGTTGATTTACTTAATACTGAGAAAACAGCCTTGACTCAACAAACCCAAAATGATAAGGTATTGATGCTCGCTCAAGAGAAAAAAATGGCCCTTTGTGAGATATGTGGTTCTTTTCTTGTAGCAAATGATGCTGCAGAGAGAGTCCAGTCTCATGTCACGGGTAAGCAGCATGTTGGTTATGGTATGGTCAGAGATTTCATCTCCGAGCACAAGGTAAGGTGTTCCTAA

Protein sequence

MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRDFISEHKVRCS
Homology
[Close]
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match: Q3SX41 (Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-40
Identity = 84/206 (40.78%), Postives = 129/206 (62.62%), Query Frame = 0 

Query: 2   WDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELA 61
           WD + VC +Y+  FCP +LF NTRSDLGPC +IHD+ L++ +EKS R       +E +  
Sbjct: 29  WDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRF--MKVGYERDFL 88

Query: 62  QFCEKLVMDLDRRVRRGRERLA--QEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEAL 121
           ++ + L+ +++RR+RRG  RLA  Q  + +     + +  E++ VL +KI  LL+Q+E L
Sbjct: 89  RYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEEL 148

Query: 122 GEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAA 181
           G  GKV+EA+ +M+ V+ L  E+  L   T   +    AQEK+M +CE+CG+FL+  DA 
Sbjct: 149 GSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIE-SFAAQEKQMEVCEVCGAFLIVGDAQ 208

Query: 182 ERVQSHVTGKQHVGYGMVRDFISEHK 206
            RV  H+ GKQH+GY  ++  + E K
Sbjct: 209 SRVDDHLMGKQHMGYAKIKATVEELK 231

[Close]
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match: O95232 (Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-40
Identity = 84/206 (40.78%), Postives = 129/206 (62.62%), Query Frame = 0 

Query: 2   WDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELA 61
           WD + VC +Y+  FCP +LF NTRSDLGPC +IHD+ L++ +EKS R       +E +  
Sbjct: 29  WDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRF--MKVGYERDFL 88

Query: 62  QFCEKLVMDLDRRVRRGRERLA--QEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEAL 121
           ++ + L+ +++RR+RRG  RLA  Q  + +     + +  E++ VL +KI  LL+Q+E L
Sbjct: 89  RYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEEL 148

Query: 122 GEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAA 181
           G  GKV+EA+ +M+ V+ L  E+  L   T   +    AQEK+M +CE+CG+FL+  DA 
Sbjct: 149 GSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIE-SFAAQEKQMEVCEVCGAFLIVGDAQ 208

Query: 182 ERVQSHVTGKQHVGYGMVRDFISEHK 206
            RV  H+ GKQH+GY  ++  + E K
Sbjct: 209 SRVDDHLMGKQHMGYAKIKATVEELK 231

[Close]
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match: Q5SUF2 (Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-40
Identity = 84/206 (40.78%), Postives = 129/206 (62.62%), Query Frame = 0 

Query: 2   WDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELA 61
           WD + VC +Y+  FCP +LF NTRSDLGPC +IHD+ L++ +EKS R       +E +  
Sbjct: 29  WDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRF--MKVGYERDFL 88

Query: 62  QFCEKLVMDLDRRVRRGRERLA--QEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEAL 121
           ++ + L+ +++RR+RRG  RLA  Q  + +     + +  E++ VL +KI  LL+Q+E L
Sbjct: 89  RYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEEL 148

Query: 122 GEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAA 181
           G  GKV+EA+ +M+ V+ L  E+  L   T   +    AQEK+M +CE+CG+FL+  DA 
Sbjct: 149 GSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIE-SFAAQEKQMEVCEVCGAFLIVGDAQ 208

Query: 182 ERVQSHVTGKQHVGYGMVRDFISEHK 206
            RV  H+ GKQH+GY  ++  + E K
Sbjct: 209 SRVDDHLMGKQHMGYAKIKATVEELK 231

[Close]
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match: Q5R8W6 (Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-40
Identity = 84/206 (40.78%), Postives = 129/206 (62.62%), Query Frame = 0 

Query: 2   WDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELA 61
           WD + VC +Y+  FCP +LF NTRSDLGPC +IHD+ L++ +EKS R       +E +  
Sbjct: 29  WDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRF--MKVGYERDFL 88

Query: 62  QFCEKLVMDLDRRVRRGRERLA--QEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEAL 121
           ++ + L+ +++RR+RRG  RLA  Q  + +     + +  E++ VL +KI  LL+Q+E L
Sbjct: 89  RYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEEL 148

Query: 122 GEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAA 181
           G  GKV+EA+ +M+ V+ L  E+  L   T   +    AQEK+M +CE+CG+FL+  DA 
Sbjct: 149 GSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIE-SFAAQEKQMEVCEVCGAFLIVGDAQ 208

Query: 182 ERVQSHVTGKQHVGYGMVRDFISEHK 206
            RV  H+ GKQH+GY  ++  + E K
Sbjct: 209 SRVDDHLMGKQHMGYAKIKATVEELK 231

[Close]
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match: Q9NQ29 (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens OX=9606 GN=LUC7L PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-25
Identity = 65/204 (31.86%), Postives = 111/204 (54.41%), Query Frame = 0 

Query: 4   DKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFE-KSPRHDAYVPKFEAELAQ 63
           D  VC  +++  CPHD+   TR DLG CT+IHD  L+  +E  S   D +   FE +   
Sbjct: 32  DDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLF---FELDAMD 91

Query: 64  FCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAE---KSEQLSVLEEKIKNLLEQVEAL 123
             E  + + DRR    ++RLA+  E      +SAE   K+E++  L E+I  LL + E L
Sbjct: 92  HLESFIAECDRRTELAKKRLAETQE-----EISAEVSAKAEKVHELNEEIGKLLAKAEQL 151

Query: 124 GEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAA 183
           G  G VDE++ ++ +V+ +  +K    ++ +N       Q++K+ +CE+C ++L  +D  
Sbjct: 152 GAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDND 211

Query: 184 ERVQSHVTGKQHVGYGMVRDFISE 204
            R+  H  GK H+G+  +R+ + +
Sbjct: 212 RRLADHFGGKLHLGFIQIREKLDQ 227

[Close]
BLAST of Cucsat.G21222 vs. NCBI nr
Match: XP_004143633.1 (luc7-like protein 3 [Cucumis sativus] >XP_011654891.1 luc7-like protein 3 [Cucumis sativus] >KGN50411.1 hypothetical protein Csa_000280 [Cucumis sativus])

HSP 1 Score: 407 bits (1045), Expect = 8.78e-141
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. NCBI nr
Match: XP_008467232.1 (PREDICTED: luc7-like protein 3 [Cucumis melo] >XP_008467233.1 PREDICTED: luc7-like protein 3 [Cucumis melo] >KAA0055163.1 luc7-like protein 3 [Cucumis melo var. makuwa] >TYK00300.1 luc7-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 403 bits (1036), Expect = 2.05e-139
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHD KLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDPKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEK+EQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKTEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. NCBI nr
Match: XP_038874248.1 (luc7-like protein 3 [Benincasa hispida])

HSP 1 Score: 401 bits (1030), Expect = 1.68e-138
Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC RIHDQKLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVD LNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDSLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFI+EHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFITEHK 234

[Close]
BLAST of Cucsat.G21222 vs. NCBI nr
Match: XP_022157696.1 (luc7-like protein 3 [Momordica charantia])

HSP 1 Score: 400 bits (1029), Expect = 2.39e-138
Identity = 202/205 (98.54%), Postives = 202/205 (98.54%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC RIHDQKLKESFE SPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFENSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLN EKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNAEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. NCBI nr
Match: XP_022958228.1 (luc7-like protein 3 [Cucurbita moschata] >XP_022958229.1 luc7-like protein 3 [Cucurbita moschata] >XP_022995734.1 luc7-like protein 3 [Cucurbita maxima] >XP_022995735.1 luc7-like protein 3 [Cucurbita maxima] >XP_023533430.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023533431.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo] >KAG6605698.1 Luc7-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035608.1 Luc7-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1027), Expect = 4.98e-138
Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC RIHDQKLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVD+LN EKTAL+QQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDVLNAEKTALSQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match: A0A0A0KRS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172900 PE=3 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 4.25e-141
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match: A0A1S3CT91 (luc7-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103504633 PE=3 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 9.95e-140
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHD KLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDPKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEK+EQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKTEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match: A0A5D3BMT7 (Luc7-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00440 PE=3 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 9.95e-140
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHD KLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDPKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEK+EQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKTEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match: A0A6J1DYY7 (luc7-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111024344 PE=3 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 1.16e-138
Identity = 202/205 (98.54%), Postives = 202/205 (98.54%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC RIHDQKLKESFE SPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFENSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVDLLN EKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDLLNAEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

[Close]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match: A0A6J1K4T0 (luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491178 PE=3 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 2.41e-138
Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0 

Query: 1   MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAEL 60
           MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC RIHDQKLKESFEKSPRHDAYVPKFEAEL
Sbjct: 30  MWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAYVPKFEAEL 89

Query: 61  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 120
           AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG
Sbjct: 90  AQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALG 149

Query: 121 EAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 180
           EAGKVDEAEALMRKVD+LN EKTAL+QQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE
Sbjct: 150 EAGKVDEAEALMRKVDVLNAEKTALSQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAE 209

Query: 181 RVQSHVTGKQHVGYGMVRDFISEHK 205
           RVQSHVTGKQHVGYGMVRDFISEHK
Sbjct: 210 RVQSHVTGKQHVGYGMVRDFISEHK 234

The following BLAST results are available for this feature:
BLAST of Cucsat.G21222 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3SX414.5e-4040.78Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1[more]
O952324.5e-4040.78Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2[more]
Q5SUF24.5e-4040.78Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1[more]
Q5R8W64.5e-4040.78Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1[more]
Q9NQ295.4e-2531.86Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens OX=9606 GN=LUC7L PE=1 S... [more]
BLAST of Cucsat.G21222 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143633.18.78e-141100.00luc7-like protein 3 [Cucumis sativus] >XP_011654891.1 luc7-like protein 3 [Cucum... [more]
XP_008467232.12.05e-13999.02PREDICTED: luc7-like protein 3 [Cucumis melo] >XP_008467233.1 PREDICTED: luc7-li... [more]
XP_038874248.11.68e-13898.54luc7-like protein 3 [Benincasa hispida][more]
XP_022157696.12.39e-13898.54luc7-like protein 3 [Momordica charantia][more]
XP_022958228.14.98e-13898.05luc7-like protein 3 [Cucurbita moschata] >XP_022958229.1 luc7-like protein 3 [Cu... [more]
BLAST of Cucsat.G21222 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRS24.25e-141100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172900 PE=3 SV=1[more]
A0A1S3CT919.95e-14099.02luc7-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103504633 PE=3 SV=1[more]
A0A5D3BMT79.95e-14099.02Luc7-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728... [more]
A0A6J1DYY71.16e-13898.54luc7-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111024344 PE=3 SV=1[more]
A0A6J1K4T02.41e-13898.05luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491178 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..151
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableCOILSCoilCoilcoord: 226..263
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..347
NoneNo IPR availablePANTHERPTHR12375:SF47ARGININE-ASPARTATE-RICH RNA BINDING PROTEIN-LIKEcoord: 1..346
IPR004882Luc7-relatedPFAMPF03194LUC7coord: 2..250
e-value: 2.0E-88
score: 296.3
IPR004882Luc7-relatedPANTHERPTHR12375RNA-BINDING PROTEIN LUC7-RELATEDcoord: 1..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G21222.T28Cucsat.G21222.T28mRNA
Cucsat.G21222.T29Cucsat.G21222.T29mRNA
Cucsat.G21222.T2Cucsat.G21222.T2mRNA
Cucsat.G21222.T5Cucsat.G21222.T5mRNA
Cucsat.G21222.T1Cucsat.G21222.T1mRNA
Cucsat.G21222.T30Cucsat.G21222.T30mRNA
Cucsat.G21222.T27Cucsat.G21222.T27mRNA
Cucsat.G21222.T13Cucsat.G21222.T13mRNA
Cucsat.G21222.T3Cucsat.G21222.T3mRNA
Cucsat.G21222.T4Cucsat.G21222.T4mRNA
Cucsat.G21222.T9Cucsat.G21222.T9mRNA
Cucsat.G21222.T7Cucsat.G21222.T7mRNA
Cucsat.G21222.T23Cucsat.G21222.T23mRNA
Cucsat.G21222.T6Cucsat.G21222.T6mRNA
Cucsat.G21222.T12Cucsat.G21222.T12mRNA
Cucsat.G21222.T16Cucsat.G21222.T16mRNA
Cucsat.G21222.T10Cucsat.G21222.T10mRNA
Cucsat.G21222.T15Cucsat.G21222.T15mRNA
Cucsat.G21222.T20Cucsat.G21222.T20mRNA
Cucsat.G21222.T11Cucsat.G21222.T11mRNA
Cucsat.G21222.T8Cucsat.G21222.T8mRNA
Cucsat.G21222.T25Cucsat.G21222.T25mRNA
Cucsat.G21222.T22Cucsat.G21222.T22mRNA
Cucsat.G21222.T24Cucsat.G21222.T24mRNA
Cucsat.G21222.T17Cucsat.G21222.T17mRNA
Cucsat.G21222.T19Cucsat.G21222.T19mRNA
Cucsat.G21222.T18Cucsat.G21222.T18mRNA
Cucsat.G21222.T21Cucsat.G21222.T21mRNA
Cucsat.G21222.T14Cucsat.G21222.T14mRNA
Cucsat.G21222.T26Cucsat.G21222.T26mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006376 mRNA splice site selection
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0003729 mRNA binding