Cucsat.G21003 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21003
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Mitochondrial import inner membrane translocase subunit TIM22-like
Location	ctg910: 80647 .. 85753 (-)
RNA-Seq Expression	Cucsat.G21003
Synteny	Cucsat.G21003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATTTAACTCAAATCTCTTACAATGCTCTATATATGTGTGTGTGTTTGTATATATATATATATTTATTTATTTATTAGGGTTACTGTAGAATTAAAAAAGAAAAAAAAGGAACAAATGAAATATATATATTTTGTTATCCATCCAGCGCTTTGTTAGATCCGGCTCCAAGGTTAAGCTTTTGTGCGAAACTAACGGTTGCCGGACGGTGGATAGAGGAGAAGGAAGAGGAACCAAGAAGAGATAAAAGGGTCCATCCAGTTGACTTGAGTTTTCATAGATGGAGCAGGGTAAACAAGGAGTGGTAGTTAAATTGCCTCCGCATCAGAACCCCGTGGAGCAGATTCAGGCTCGTTTCAAGGAACTAGAAAATGGGTTCAGGACGTGGTTGGCTAAGCAATCTCTCCCAGTTGAGGCCGCTGTTGTCACCGTCACCAGCGCTGCGCAGGGCGCTGCTATTGGTGGCTTTATGGGCACTCTCACCAACGACGTTTCTTCTTCTCTCCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCTTCTTTCAAGCAGGCCCAGGTGCGAATCTGCTCCTTCAGTTATTCATTCAACAAACATTATTTTATGGAATTTCGGGTACCTAATTCTTCTGCTTTATTTTTTTCAAAATCATTATTATTATCATTTTAATTGTAGGCTCTTGCTGGAGGTCCCTTAGTACAAGCTCGCAACTTTGCCGTCATGACAGGTGTTAATGCTGGCATATCTTCTGTTATGAAGAGACTAAGAGGCAAGGAGGATGTCCAGTCAAGGTGAGGTTTTACGACTGCTCCGCCGTTCCTTTTTCCAGATTAATAATTTGTTCTATCATCAGGCTTTGCATTCCCTGGCTTTCTTAAGTTCATCTTACTTTTTAATGCAAAATTAATTTTGTTGTTGAAATGGAATTATGTAAGAGGGATAGAAAAGCCAAGCTACTGCTTTTGTATCTGTCTTCGTAATCTTTCTGTTTAAGGAAGAAAAATAAAACTTCTCCAAGTGGCACAAAGAATACTAAGGTTGCAGTTAAAAACGGTGTGATTAAGTTTGCATCAAGGCCACAAAGATGAGAAAATCCAAGAGTTTCCATTACTTGTTCAAGGATTAAATGCCAAAAGAAGGCTCTTACATGCTGCAGCCAAAGGAGGATCCTTATGTTTTTAGAAGTCAAGGACAAAGATGTACAGCTTGTGGAACAAATCGTATACAAGTATGGTTGTCCAAAGAGTGTTCCTTTTGGAGATCAAATCTTGTAGTTCGAGAACATATCACTCATATCAAGAAAATTTAACTGTTTTTCAATTCACCTGTGGTAGCCCACTTTGTCTTTGTAACTCCTCATCAACCTTTGTAGGGAGAGTAAGGAGAAAATTCCTAAATGCAAACTCTTTATGTCTCCTGCAACTAGTATTAGGGCAGATCCTTTGAGGAGTAGGTGTAGGAACTGATAACACATGTATTAACAAGAAAAAGAAAAAAAGAATGGATTGTAAGTAGAAAAGATTTGAAAAAATGACAGGATAAGGTAATTACTTCCTTCAGATTTCTAGCATGCTTTTTTTAGTTTGGGGATGTGTCTTAGATGTAGTGTCTGTCTGGTGATTGAGAGTATAGCCCTATTGTGAAGGAGTTTCTTCCTCATTCACCAAGTTTTGTGTTGTTTTATGGAGCATTTGGATTGAGAGTTCTCGGAAGGACGTTTAGTCATGATTAGGTTTCATGTTTCTCCTTGGAATTAGGTATATAAAATTTTTCGTAATTACCTTTTAGATCTTAATTTTTTAGATTCTTTTTAAATCACTAGATTCAAAAGGTTAAGCTAGAGGGTGCAAGAAAATTTATTATTATATCACTCACACTTCCCCTCACTTGTGGTTCGAAATATGAAGAATATCCAACAAGTGGAAATCAAATTTAATTGGGAAGAAAATAACATAGCAAGGGCTTGACAGAACCTCCCTTGACCGCTTGCTCTATATCATCATAAATCATCTTGACCTAAAAGTTTAAGCTTGTGGGTAAAGGTATTATATCACTCAACAAGAAATAACATTGTGGGGGGGCTTAAAAGCAACCTGCTCTGATATCATCTTAAATTACCAATTGACCCAAAAGCTTAAACTTATGGATGAAAGTAAATTTAATCATGTATCATCCAACAATTCCCCTTTTGTTTTAGTTTAGCTCTTTTTTGCTAGGTGTTTGTATTCCCCTTCTATTCTTTTCTTTCTTCTCAATGAAAACATTTTTCCGTTGGTCAACAAAGCATAACTACCGTTGACAATTTATGCTTGAGGAAAAAAATGTATTCTTTCACACTTTAGGAACCACGTAAACAACAACATCAAACCTCATTAACAAAAAATGTATTTTTTCCTTATTTATCATTACTCATCATTTTAAGCTATTGGGTTCTATAAAGTTCTAAGTGGTGTCAGAACACAAGAGTTTATGTTTGAACTTCTGCAATTCATTTCTTTATCAACTAATATTGTAGCTACTTGTTGGGCATTGCTAATGTCAAAGCCGATGAGTTAGAGTATGTATTAAAATGTGAATAAAAGATTAAATGTGCCATAATACATCCACTTAAATTTTTGAGTTTAGTAGTAGTTCTACAAAGGTTGATTCTTGGGTTCTCCTTTCAAGAAGGATAGCAATATGCTTTGGGACATCATTGTTAGAGCCGTTTAAGTCCTTATGGCAATAAAGTAACCAAGAGGTTTTCAAAATGGAGCACTAGAGCACACATATTGCACCACTTTTGAGAATCTAAGTTCACCATTTGTTCCTGATGTTACTGAATTCCTCTGTTTAGTTTACCCTTTTTCCTCTTTTTATTTTAATCCTTATTTGGTAGTTTGAGTAATTTCTCTCTATCATTTTCATTGAATATCTTCTTCTTCTCTCTCTCTCTCAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAGAAGAAAAGAGTACAAAATTATTTAAGTCTAAGAAAAGAGTACTACATCGCCAAGTTGTTTAAATCTTAGGATAGGTTTACAAAATTGTTGCCAAGGTTCTGGCCAATAGTTAAGGTTCTTCCAATAAACATCGCTGAATCTCCTTTCCCTTTTCTCTTCCTTTTGGTGGTGGATGTCTTTAGCTGATTGATCCAAGGGGAGTTGATAAGGATGCGATCTTGGTTTTTGGGTTGGTGTTAACTGCGACCAGGCTAAATTGTGTAGGTGGCCTTTCCTAGTAGGTTGTTAGTTTGTGGTCTACCCTTGTCCTACACGGACCTCTCTCTTGGGCATAATCCTAGGTGCTTGGAGTTTTGGAACCCTTTCTTTGAGGAAATCCAAGAACTTCTTTCCTCTCGATAACTATGAGAGAGAGGTTCCAACCTATTTCATTTCGACATCCAAGATTCAAGTCTTGGTCAGTAAGAAGCTAGAGAGTTATTATCAGGTATTGAAGTTTATTTTGTATGGCTAGTTGTTTGGCTTTGAGTGGATTGCTTTTTATTTGAACGTGGACATTTTGTTCTGTATTTCATTTATTCACTACGAAAGCTTGGTTTCTCAAAAAATAAAATATTAATATGGTTAAACAAATTAACCATCATGGGTTGACCTTGTGTTAAAAAAGGAGACAGTCTCAATAACCAACTAAGAAGTCATGAGTTCAATCCATGGCGGCCACCTACCTAGGAATTAGTTTCCGAGTCTGCTTGACATTTAAATGTTATAGGAGGGTTAGGTCGTTTGTCCTATGAGATTATTTGAGGTGTGTGTAAGCTGATTCGAACACTATGGATATAAAAAAAATATGGTTGAATTAATTGTATAGAGGCCCACAAGAAATGTCAAAGGGCTTTATCATATGCAGTTGTTATGTTTTAACATTGTCTGAAGAGAATAAGATCTGTATAGCAATCTTGTATCCAGTTAGTCATAGATATATTTATTCTCTGCTTTTTTTCCCCTTTGGTTCAATATATGTATTTATTCTTACATCATATAATCGTGGGAAAAGAGTGAGAATTCCTATGCGGATAATTTTGCACACAGTTTGAGTTCTTTGATGTGCGTAGATGAAAAACAGTTCCAGTCTTTTTTATGTTTCTTCTAGCCAACGAATTTTAATCTGGTTCCTTGGAATCTATTTCTGGTTCTAGATGTGGTCTTCTATTTCATAGTGTACCTTTTAGTTATTTTAAGCTTTTCCTGAACAGTTTTAGTTATTGTTACAGCATGGTGGCTGCTTTTGGGTCTGGGGCAATGTTTTCACTGGTGAGTGGCATGGGAGGTCCAAATCAGGCGACAAACGCGGTTACATCTGGTCTTTTTTTTGCCCTCGTTCAAGGTGGACTTTTCAAGGTGTGTGCACTAATGGGGAACTATTTTATTATTACAAAACTTGTTGAGAATGGTACTTTTATTATTTGCTAAAGCTTTGGCAACAAGAAAAGGAAATTGTAGTGGTTTTACGATTTTATCCTGGGGGATTGCGTAGAGTTAATATGCTGTTTTGCAGTTAGGGGAAAAGTTTTCTCAACCACCTGTGGAAGATGTGTACTATGCTAAAACAAGAAGCATGTTGAATAACCTTGGACTACAAAGTTATGAGAAGAATTTCAAGAAAGGCTTATTGACCGATACCACTTTGCCGCTGCTCACTGATAGGCATGTAAATTGATTTAAAGCTTTTGTGCTTAAGATTATAAGCAATGGATATGATGTATTGACTCAGTATACACCTGCTCTGACCTGTGGCAGTGCGCTTAGAGATGTCAAGATTCCCCCAGGACCAAGGCTACTCATTCTGGATCACATTCAGAGGTCTCGATTAAGTTCTATAAACAAAATTGTCGCTGCTTCCATTACAAGTATTCTATCTCATTTATGGATAAACTTTTAATTTCAGGAACCCAGAGCTAAGAGAGAGATGAAGCTGATTTGAGGGGAAGATCTTGCTCTGTTCATTTGCAACCCAAGTGTCACTACTCTTTCTAGTTGAACTAGTATTAGGTCATCTTAATTAGGAAGAATGTGTAATAGGTCCGATGTACTCATGAGAAGTTGATTTTGTCATTTGAATTCGCACTGAGTTCGATTTTGAATGTCCTTTTCGTTTTATTTTAGATAACAGAACGATGCTACTGTAGGATTAGTGGAAGCTTTTTTTTTCCTTTTCTATGTATCTTGAATGGTTAAATCTTCAAATTTGCTGAACTTTTTTTTATAAATGCATGTGTCGAGAAGACCTTAATACGATTTGTGGTAAATGGGATTATTTCTTCCATTTTTTTACAACTAGTGTTCTTTTAAAGAACTTAGTAAAAAGTTTTTCTCACACTCTCTTGGACCTTGTACTTTGAGTTGAAGTGTTTCAATATTATTTAGATCTGCACTTTT

Coding sequence (CDS)

ATGGAGCAGGGTAAACAAGGAGTGGTAGTTAAATTGCCTCCGCATCAGAACCCCGTGGAGCAGATTCAGGCTCGTTTCAAGGAACTAGAAAATGGGTTCAGGACGTGGTTGGCTAAGCAATCTCTCCCAGTTGAGGCCGCTGTTGTCACCGTCACCAGCGCTGCGCAGGGCGCTGCTATTGGTGGCTTTATGGGCACTCTCACCAACGACGTTTCTTCTTCTCTCCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCTTCTTTCAAGCAGGCCCAGGCTCTTGCTGGAGGTCCCTTAGTACAAGCTCGCAACTTTGCCGTCATGACAGGTGTTAATGCTGGCATATCTTCTGTTATGAAGAGACTAAGAGGCAAGGAGGATGTCCAGTCAAGCATGGTGGCTGCTTTTGGGTCTGGGGCAATGTTTTCACTGGTGAGTGGCATGGGAGGTCCAAATCAGGCGACAAACGCGGTTACATCTGGTCTTTTTTTTGCCCTCGTTCAAGGTGGACTTTTCAAGTTAGGGGAAAAGTTTTCTCAACCACCTGTGGAAGATGTGTACTATGCTAAAACAAGAAGCATGTTGAATAACCTTGGACTACAAAGTTATGAGAAGAATTTCAAGAAAGGCTTATTGACCGATACCACTTTGCCGCTGCTCACTGATAGTGCGCTTAGAGATGTCAAGATTCCCCCAGGACCAAGGCTACTCATTCTGGATCACATTCAGAGGAACCCAGAGCTAAGAGAGAGATGA

Protein sequence

MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAIGGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLILDHIQRNPELRER

Homology

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BLAST of Cucsat.G21003 vs. ExPASy Swiss-Prot
Match: Q9FLT9 (Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis thaliana OX=3702 GN=HP30-2 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.6e-68
Identity = 136/217 (62.67%), Postives = 165/217 (76.04%), Query Frame = 0


Query: 8   VVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAIGGFMGTL 67
           V+  +   QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVT     QGA IGG MGTL
Sbjct: 16  VMSLMKDQQNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTL 75

Query: 68  TNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGK 127
           + ++      PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGK
Sbjct: 76  SPEM------PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGK 135

Query: 128 EDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKFSQPPVED 187
           ED++S++VAAFGSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P VED
Sbjct: 136 EDLESAVVAAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVED 195

Query: 188 VYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
            YY + RSML  LGL+ YEKNFKKGLL D TLPLLTD
Sbjct: 196 PYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTD 225

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BLAST of Cucsat.G21003 vs. ExPASy Swiss-Prot
Match: Q9SCK3 (Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis thaliana OX=3702 GN=HP30-1 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.0e-66
Identity = 131/209 (62.68%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 16  QNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAIGGFMGTLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+TWL+KQS+PVEAAVV+  S  QGA IGG MGTL+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED++S++V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P  ED ++ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           ML  LGL+ YEKNFKKGLLTD TLPLLTD
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTD 230

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BLAST of Cucsat.G21003 vs. NCBI nr
Match: XP_004145954.1 (chloroplastic import inner membrane translocase subunit HP30-2 [Cucumis sativus] >KGN49557.2 hypothetical protein Csa_000034 [Cucumis sativus])

HSP 1 Score: 429 bits (1102), Expect = 1.42e-150
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

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BLAST of Cucsat.G21003 vs. NCBI nr
Match: KAA0042522.1 (mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo var. makuwa])

HSP 1 Score: 422 bits (1085), Expect = 7.92e-148
Identity = 221/226 (97.79%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

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BLAST of Cucsat.G21003 vs. NCBI nr
Match: XP_038876132.1 (chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa hispida])

HSP 1 Score: 418 bits (1075), Expect = 1.98e-146
Identity = 220/224 (98.21%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of Cucsat.G21003 vs. NCBI nr
Match: XP_008437651.1 (PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1072), Expect = 5.29e-146
Identity = 219/224 (97.77%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of Cucsat.G21003 vs. NCBI nr
Match: XP_022996116.1 (uncharacterized protein LOC111491434 [Cucurbita maxima])

HSP 1 Score: 401 bits (1030), Expect = 1.33e-139
Identity = 208/224 (92.86%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQG QGVVVKL P QNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGNQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ  NAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           S+PP EDV+YAKTRSML+NLGLQSYEKNFKKGLLTD+TLPLLTD
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLQSYEKNFKKGLLTDSTLPLLTD 224

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BLAST of Cucsat.G21003 vs. ExPASy TrEMBL
Match: A0A0A0KJR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139080 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 2.91e-153
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

[Close]

BLAST of Cucsat.G21003 vs. ExPASy TrEMBL
Match: A0A5A7TGI2 (Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00150 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 3.83e-148
Identity = 221/226 (97.79%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

[Close]

BLAST of Cucsat.G21003 vs. ExPASy TrEMBL
Match: A0A5D3C3H2 (Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00170 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 2.56e-146
Identity = 219/224 (97.77%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of Cucsat.G21003 vs. ExPASy TrEMBL
Match: A0A1S3AV59 (uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 2.56e-146
Identity = 219/224 (97.77%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQGKQGVVVKL P QNP+EQIQARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of Cucsat.G21003 vs. ExPASy TrEMBL
Match: A0A6J1K3T6 (uncharacterized protein LOC111491434 OS=Cucurbita maxima OX=3661 GN=LOC111491434 PE=4 SV=1)

HSP 1 Score: 401 bits (1030), Expect = 6.43e-140
Identity = 208/224 (92.86%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60
           MEQG QGVVVKL P QNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGNQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ  NAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224
           S+PP EDV+YAKTRSML+NLGLQSYEKNFKKGLLTD+TLPLLTD
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLQSYEKNFKKGLLTDSTLPLLTD 224

The following BLAST results are available for this feature:

BLAST of Cucsat.G21003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLT9	5.6e-68	62.67	Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis th...	[more]
Q9SCK3	9.0e-66	62.68	Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis th...	[more]

BLAST of Cucsat.G21003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145954.1	1.42e-150	100.00	chloroplastic import inner membrane translocase subunit HP30-2 [Cucumis sativus]...	[more]
KAA0042522.1	7.92e-148	97.79	mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo...	[more]
XP_038876132.1	1.98e-146	98.21	chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa h...	[more]
XP_008437651.1	5.29e-146	97.77	PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitoc...	[more]
XP_022996116.1	1.33e-139	92.86	uncharacterized protein LOC111491434 [Cucurbita maxima]	[more]

BLAST of Cucsat.G21003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJR1	2.91e-153	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139080 PE=4 SV=1	[more]
A0A5A7TGI2	3.83e-148	97.79	Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis me...	[more]
A0A5D3C3H2	2.56e-146	97.77	Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis me...	[more]
A0A1S3AV59	2.56e-146	97.77	uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=...	[more]
A0A6J1K3T6	6.43e-140	92.86	uncharacterized protein LOC111491434 OS=Cucurbita maxima OX=3661 GN=LOC111491434...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 47..168 e-value: 4.6E-10 score: 39.9
None	No IPR available	PANTHER	PTHR14110:SF6	CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2	coord: 1..225
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21003.T1	Cucsat.G21003.T1	mRNA
Cucsat.G21003.T2	Cucsat.G21003.T2	mRNA
Cucsat.G21003.T4	Cucsat.G21003.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008320	protein transmembrane transporter activity