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Cucsat.G20700 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGAGGCATTACGTTTGAACTTCCTCCTTAGAACTAAATTTGCAAAACATGTAAGTCGAGGAAAAGAGCAATGTAAATTGGGAGATGAGTAACCTAAAGGGAAAGGCAATTCTATGCTTATTTATGTTAGTAGAGAAATTTACATTGATTACAGGATGTAGAGAAACAAAGTTAGACAAGTTTGAAAAAGAGGGTCAAAGTTGAGGGAGGTTGGAAGACGAAGTTAGGAGGAAGCGAGGAGTGTGAATGACATAACGAGTTCGAACACTCATATTTTTAAGTAGGGGTACTTATGGTATTTTACAACGCAAAAAGGTGTTCTTGTTTTTTGGGTTATTTTTTTTGAAAATTTCCTCCCTCCGTCGGAAGAGGATTTCGCTACATCGGCTCACCGGGGAACGGCTCTGAGAGGTATATGCTTTGATCCTCCCATCTTCAATGGTGAAAAGCTTACAAGGCGGAGGCCAAAACCTCCCGACTGACGTCACGCAGGTCATTGATCAGTTGGAGCGCCACTGCTTGGCTCCTGATGGGTCTCTCGTCTCCAAACCTGCCCACTACGATCTACAGCTCGTACTCCATTTACTTCTCTTTCTCTCTTTCTTTCCACTCGTTTTCTTTGTTTTATCGATCGCTGAGGAAATGTAGGTGGAATTGAGCAATATGTTTGATTTCTGTTTGGGAGTGCTCAGTAAATTGACCTAATTGTGTAATGGACTGAAGCTCTGAATTTCACTAATTATTGTGAAATTTGCAGGCGAGAGAAGAAATGTCGAGGGAAAGGTTGCGTTATTTGGAAGCCATGGTAGGTGGTACTTTGATTCTCTAGTTCTGGGTTCTGTGATATTTTTAAAATTTATTGAGCTGGTTGCATACCTGCACCCGTTGATTACTTTTGAGTGTTGATGTTGTGGGTTTCATGTAGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTATCAGCAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGATGTTCAGGCGCTTTATCCACAGCTAGGCTTGAAGAATTCGCCGCAGGTTTGTGATACGAACCATTTCATTTCACGGTATAAGATGACACAGAAACCCAAAATCTACCTACCTCTCAAACTCCTCACTTTCTCCATCTAACAACATTTCAATTCAGAATGAACATAGTTTCCTTCTGACAAATCTGTCACTCACTAATAAACTAATTTACCTGTATTGATAACCTTGTTTTCTAACAGTTTGATTGTGTTCTTATTGAAATGGTTTTGCTTCTATAGTTGGTTATAAAATTACTTTGCAAAATCATGTTTATTACTTTAGTTGAAAGTATTAGTGAGTTTCAGTTTGATTCTTTCTTAGCTTTTACATTAAAATGACGTTCAATATGTTTTTTTTTCTTTGTTTGGGTGTTCAAACTGAGTGTATCTGGAATATGATTGTTTGTTGAGGAAATGTAATGAAAGGCCACAGGCTGGAAGTCACTAACTAGCCTTCCGTTGTCTTGGTGGTGTTAAGTTTGCATCTTAACTCCTTTCAGAAATTCAGGGTCTCTGGGGCAATAGTTTGGATATTTATGTTCATAAATATATTGTGTATATACATAAGAACATATTAATTTTTTAGGTAACAACTAACAAGCTATTCTGGAAAAAGCTTATGATTATTGGAATTGCCTGAACTCCTTATAATTATAGCTTTCAAACCTTGTTTCAGGTTTATGAGACTCTTGAGCACCGAATGGTAGTGGCTGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGATGGTGAAATCCATGAGGAAGAGATCGAGAAGTTATCGCGAAGTTCCCTTGATAGTACAAGCACTGGTGTCACAATCAGTTCAAGCACTAATTCAACAAATTATGCAAGTGCTAGCAGTACAGGAAGCATTGTGAACAACAGTCTTTCAGTAAGCTCAACTGATACTGCAGAACCTGGAGTAGGTGGTGTTCCCAATCGCTTTCTTGGAATTACACCTGCATTTTTATGGCAAACACAGCTCCATCATACGCCTTCCACGGTATGGCATCTATTATGTGGAAATGAGTGGAAGGAATCAAACTATCAACTACATTTACATTTCTTTCTTTTCTTCTGGATTTTATTGAATTGGGTCCTTTTGCAGTCTTTGCTCTTATACCAAATTCTTATTGGATAGTTTTTAACTACCTAATATTTTTATTCTCAATTTATGAAACACTTCACTGATCTAAATTATCTGCAACTTGTTCTTATGTTACTATAGGATATGGCTGAATATCAAATGGCTCTTTCTCGTGAGATTGATGCTCGTCTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTATTATGGATGATATTGGTAGGTCGTCTATATTCCTTTCCATTTTTTACAATTCTGCAAGCATGTTTTATCAGTGCAAGTGTGATTTAAATTTTTTTATAATAATAATATATACTTTTTTTGTAATGCGTTTTCTAGCTTCAGATATTCCGGCATATTTCCTCGATCCTATGTGTCAAAAAGTTGACATTTATGTGATTTGCGTGATAAAATCATTAGAAATAAGGGGCTTTGTCGATAGTTTAAAGCCATGAGGGTATTTTAGTATTTTACTTTACTCGGGCTTGCTAGAGCCTATAAAGTTGTCTTCGCTTGTAACTTTCATTGTGTGTGGAAATAATGAAAGAGACTGGTAGTTTTTCTCCATATTCTAGGGTTTTCCATGTAAACCTTGTGTTCTCTTTTCTACCGTTTAACAAAATTATCGATCTTTTTTTTTAATCTTTTAAACTTCAACCACATTTATCAATGTGAAGAGTGTCGACCTACATGATCTTGAAATATGAAACTTTGTGGACTTTGGTTTTAGTATAAATTCATTAGACGATGCATATCTTATGGCCTTGCATTCATGCAGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCTGAGAGGTCTGGTTGGCTCTTTTGTGGCAGTATTTATTTTGTTTTGTTTTTCTATACCCAGTAATTTGTTTTCTCAATAAGACTTCAATCAATAGGGTTAAGTTGATCATCGAAGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGCGGACAGAAAGTTCGCTGAATATTACAATGTATGTGACAGGAAGTTCATTTTACTCTATCCGTTTTGTCAGAGGTTAATTGCACGAATTGTCTAATAATTTGTTCAAAACTAGGTTCTTGAGCAGATATTGGGAGTACTAATAAAGCTTGTCAAAGATTTGAAGTTGCAGCATCAACATAAATATGTAATTGCCTTTATTTTCTAGCATAATGGATGATTGGTTTCGCATGAATGGTCTCGGTTATTAATTTTCGTTCGTAGATTTGAGACTTTAACACAACTTTAACACATTAACCTGGATGAACTGAAATTTTTTGTAGGACGATCTCCAGAAAACATGGCTGTGCAAAAGGTGTGAGACCATGAATGCAAAACTGAGGTCTGTTTGTAATTATATGCTCATTTGATCCTTGTGTTGGTTAAACAATTAGATATTCGTACAATATTTTTCTTGTGTGAAGCACATGTTGAGTGCATGTCGGAGTGTGTCTAACACTGACTCCACAAGAAATAGTGTCTGTACTTTCTATATATATGTCCAATCAATACACACCCTAACATGTGACATTGGCTCAACTCATCGAAATGATTAGCCATGCCTAGCCTGAGCTTTACAAAGATTGTGGCAATTCCTTTTTCATTTCTCCCGTTTCTCTTCTTTGAAGCTGAATACCATTAGCAAATTCTATTCTATTTCTCTAAATATGCTTTGCTCATGAGCTCATCCTCTGTCATAATTATGCACCTCATTTTTCAGTGTATTAGAGCACGTTCTCTTGCTAGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGGTATTTGTCAAGTATATTCTTTTCAGTAAACGGCAGGTCAGCATGTTCTGTTCAAGGTAAAAATGATTCGTAATGTGCTTTGTTACAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTAAGTTTTTCTCTTTCATTCCCTCTTGCTCTCCTCTTTATCTCTATACATATATGATAAGAAACAGGAATATATTGGAGGGTTTAGCGACAAACTAACCACAGTGGATAATTGCTTTTAGTACAATAAGGCGTAGGAGACCGAAACATAGACCTTTTGATTATTAACACATTTATATGTCAGTTGAACTATGTTCAACTTGACACATGGAGTGATAGAGGATAACTGTAGAGAGCTGTGTTTTGAAAAATCAATTTCAAGTAGCACCTCGAAAATAGGTTGGGCAAATGACTTCATAAAAGCAATTAGCTGATTTCTCCTAGCTTGGAAGGTTCTGTGATTTCTGCCGTAGCAGAGCTTTATTTTTCAGCCACCATCATGTACCTTATGTTTATTGATGACATTCATGTCCCATTTGATTAGTAAACCTTACAATGTATCTGTATTCATGACATGGCCTCAATTAATTTGTTGAAAATTTATGCTAAGATATAAATAGATGCATAATAAAATAAATTATACCTCTAACTCCGACTTCACATATTAGAGCCAAACAAGCAATCGATCATAGAATTGTAAATAATAAACTTAGGAAAAAAGGAGAACAACACTGAAAATTATATTGGTTTGCCCCAAGCTCGGGACTATATCCAGTATTCTGAAACTGCAGACTCTACTATGATGAAGATTGAAAAGAAACCCTCGAACACTCCAATAAATCTCTCTTCTCAAATAGTCCAACAAGAACTATTTGAATCCAGTACCTAGGTATTTTGAACTAGGTACTTTTGAACTTTATTTTGCTAACTGTCACTCTAAAATACTGAAGAATAAAAACGTCAATGCTCTCGGTTTTAATTCTTCTTCAGCAGCAAAATGGATGATGGCCCACTTGTATTTTTCCTTCAAAAACATCCTTTTATAGAATAAACTGCACCGCCCATTTATTTCTTTAATCATACCCACTGACAATTTAGTCAATAGACAAGCTTTCTTACATAAGTTCATTGGAGGAAATGGGCCTTGAGAATGGGTTAACATGCAAAATAAAATGTTGCCACATTCTTAACATGATCCGTGTCACGTCACACACTGACCCTTCCGGTGTTGAAAAATAAAAGCAAAGAATAATAATAAAAATGAAACAAAGGGACAAACCATGGATATCATTTTTCCAGTTAACCCTCACAAGAAAGGGACAAATGAAGTATGCAATTATGTAGTACTCTTATTGTTCTACTCCTTTTGCAATTTGACCCTAAACCATACTTTACTTAATTTTATATCCTCACTCTGGACTTAGCTGGCTCATGCTACATGGTTTACATTTACATTTTCAATAGGTTACTCGTCTCCGTGAGTATCAAGGCGTAGACCCTCATTTCGACACAATTGCAAGGCAATACCACGATATCGTGATGGTAATAATGTCTTTAAAACAGTTATTCACTTTCATCGTCCTCTTTGTTGAAAATGAGGAAGCTCATTACCGGTTTTACTCATTTTTATTTTGCAGAAACTTGATAATATGCAATGGACAATACATCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAATCAAGTACATGAAACCATTTTACAGAGATTTTTATTCTTTTGTTTGTAATTGCTTCTTTATGTTGTGTTATGAATTATGATTTGCTTGAAGTTAATTTTTATCAGCAGCCTGTTCATAATGTATTGTTTTGCTTCCCAGCTTTGTCTTCTCAAATGGTTGGCTTAAATTAATCATAACCATGGGAGTGTTACCTGAAGAAAGTAATATGGCTCAAAATTCCTGTAGAAGCATAAGATTTTGAGAGAACAAAAAGTTGTGTTTTTATTTACAAATTTAAGGAAATTTCCATCTTATAGCTGTGTTTGGTTGTGCATGTGAAATAATATTAACTAAAATTATATTTATGTTTAATTTATGAAATTAAACATGAAGATCTTATATAATTACAAGATCAGGTCGAGGCCTGTGGGGACCCTCCCCCGCGGGTTTTTTTGCCAACCGTATTGAGGCGTGTTTTGAACTGTCAACTTTGAAAGACGTAACCCTATTGAGGCTCTGCCATTCAATGAGTGCACAAGGAAAATTCCTTCATCAAACTTGATGTCTAGTTTTCTTTTGGTCTCTCTGTCATTGAGGATGTAACTTTGCTATCTTTTGATAAATATATTTGACATTGC ATGGTGAAAAGCTTACAAGGCGGAGGCCAAAACCTCCCGACTGACGTCACGCAGGTCATTGATCAGTTGGAGCGCCACTGCTTGGCTCCTGATGGGTCTCTCGTCTCCAAACCTGCCCACTACGATCTACAGCTCGCGAGAGAAGAAATGTCGAGGGAAAGGTTGCGTTATTTGGAAGCCATGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTATCAGCAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGATGTTCAGGCGCTTTATCCACAGCTAGGCTTGAAGAATTCGCCGCAGGTTTATGAGACTCTTGAGCACCGAATGGTAGTGGCTGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGATGGTGAAATCCATGAGGAAGAGATCGAGAAGTTATCGCGAAGTTCCCTTGATAGTACAAGCACTGGTGTCACAATCAGTTCAAGCACTAATTCAACAAATTATGCAAGTGCTAGCAGTACAGGAAGCATTGTGAACAACAGTCTTTCAGTAAGCTCAACTGATACTGCAGAACCTGGAGTAGGTGGTGTTCCCAATCGCTTTCTTGGAATTACACCTGCATTTTTATGGCAAACACAGCTCCATCATACGCCTTCCACGGATATGGCTGAATATCAAATGGCTCTTTCTCGTGAGATTGATGCTCGTCTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTATTATGGATGATATTGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCTGAGAGGGTTAAGTTGATCATCGAAGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGCGGACAGAAAGTTCGCTGAATATTACAATGTTCTTGAGCAGATATTGGGAGTACTAATAAAGCTTGTCAAAGATTTGAAGTTGCAGCATCAACATAAATATGACGATCTCCAGAAAACATGGCTGTGCAAAAGGTGTGAGACCATGAATGCAAAACTGAGTGTATTAGAGCACGTTCTCTTGCTAGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTTACTCGTCTCCGTGAGTATCAAGGCGTAGACCCTCATTTCGACACAATTGCAAGGCAATACCACGATATCGTGATGAAACTTGATAATATGCAATGGACAATACATCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAATCAAGTACATGA MVKSLQGGGQNLPTDVTQVIDQLERHCLAPDGSLVSKPAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEEYQQAVSMANLGGVRDVQALYPQLGLKNSPQVYETLEHRMVVAEASQRLRLPLISKDGEIHEEEIEKLSRSSLDSTSTGVTISSSTNSTNYASASSTGSIVNNSLSVSSTDTAEPGVGGVPNRFLGITPAFLWQTQLHHTPSTDMAEYQMALSREIDARLKTKCDKVADAFIMDDIESSSGHHSSSARLPERVKLIIEEIEREEAALRQELYSADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDDLQKTWLCKRCETMNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLDNMQWTIHQVEMDLKRLPDQSST Homology
BLAST of Cucsat.G20700 vs. ExPASy Swiss-Prot
Match: Q8GYM3 (AUGMIN subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AUG4 PE=1 SV=1) HSP 1 Score: 628.6 bits (1620), Expect = 5.1e-179 Identity = 334/425 (78.59%), Postives = 372/425 (87.53%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy Swiss-Prot
Match: Q9H6D7 (HAUS augmin-like complex subunit 4 OS=Homo sapiens OX=9606 GN=HAUS4 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 8.0e-07 Identity = 45/204 (22.06%), Postives = 96/204 (47.06%), Query Frame = 0
BLAST of Cucsat.G20700 vs. NCBI nr
Match: XP_031744847.1 (AUGMIN subunit 4 [Cucumis sativus] >KGN44473.2 hypothetical protein Csa_016636 [Cucumis sativus]) HSP 1 Score: 825 bits (2132), Expect = 5.02e-301 Identity = 428/429 (99.77%), Postives = 429/429 (100.00%), Query Frame = 0
BLAST of Cucsat.G20700 vs. NCBI nr
Match: XP_008447737.1 (PREDICTED: AUGMIN subunit 4 [Cucumis melo]) HSP 1 Score: 816 bits (2109), Expect = 1.19e-297 Identity = 424/430 (98.60%), Postives = 426/430 (99.07%), Query Frame = 0
BLAST of Cucsat.G20700 vs. NCBI nr
Match: KAA0025153.1 (AUGMIN subunit 4 [Cucumis melo var. makuwa] >TYK23111.1 AUGMIN subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 811 bits (2096), Expect = 1.14e-295 Identity = 422/430 (98.14%), Postives = 424/430 (98.60%), Query Frame = 0
BLAST of Cucsat.G20700 vs. NCBI nr
Match: XP_022139359.1 (AUGMIN subunit 4 [Momordica charantia]) HSP 1 Score: 799 bits (2063), Expect = 1.36e-290 Identity = 415/433 (95.84%), Postives = 422/433 (97.46%), Query Frame = 0
BLAST of Cucsat.G20700 vs. NCBI nr
Match: XP_038900104.1 (AUGMIN subunit 4 isoform X1 [Benincasa hispida]) HSP 1 Score: 791 bits (2042), Expect = 2.07e-287 Identity = 413/433 (95.38%), Postives = 421/433 (97.23%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy TrEMBL
Match: A0A0A0K3S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210080 PE=4 SV=1) HSP 1 Score: 828 bits (2140), Expect = 1.08e-302 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy TrEMBL
Match: A0A1S3BHI2 (AUGMIN subunit 4 OS=Cucumis melo OX=3656 GN=LOC103490141 PE=4 SV=1) HSP 1 Score: 816 bits (2109), Expect = 5.74e-298 Identity = 424/430 (98.60%), Postives = 426/430 (99.07%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy TrEMBL
Match: A0A5A7SKF9 (AUGMIN subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001020 PE=4 SV=1) HSP 1 Score: 811 bits (2096), Expect = 5.50e-296 Identity = 422/430 (98.14%), Postives = 424/430 (98.60%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy TrEMBL
Match: A0A6J1CCQ9 (AUGMIN subunit 4 OS=Momordica charantia OX=3673 GN=LOC111010312 PE=4 SV=1) HSP 1 Score: 799 bits (2064), Expect = 4.63e-291 Identity = 416/433 (96.07%), Postives = 422/433 (97.46%), Query Frame = 0
BLAST of Cucsat.G20700 vs. ExPASy TrEMBL
Match: A0A6J1FPS4 (AUGMIN subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445870 PE=4 SV=1) HSP 1 Score: 779 bits (2012), Expect = 3.88e-283 Identity = 408/433 (94.23%), Postives = 414/433 (95.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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