Cucsat.G20686 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G20686
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAD(P)H dehydrogenase subunit M
Location	ctg62: 143843 .. 145568 (+)
RNA-Seq Expression	Cucsat.G20686
Synteny	Cucsat.G20686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATTGGATCTCATTTCATTTGAAAAAGAAAAAAAGAAGAGAAAAACAAAGACCCTCCATAGGGAAAAAAGGAAAATACTCCAAAACTATAAAACAGAGAAATCAAAACCAACCATTTTCTAAAAGATAGACACCAAAAGAACTCTCCCATGGCGGCAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCATACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAAAGCTGGAGACCAGGAAGAAGATCAAGAACAGGCAAAGCCGAAACCGTCGCCGCTGCGGCCCGTGGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGACAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTACATTGACCCAATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTCACTCTCCTTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTACTTTTCTTTCTCTCTCTTTCTTTAGTATTTTAGGATTCTTTGTTATATCATGGGTTAGCTCTGCCAAAACTTCAAATCGACCTATTTGTTAATAAAATAGGACTAGCTAATACTATACTAATTGAGCTAAAGAATGTATAAATACATTGATGTACTTTTATTGATTAAAGGTATGTATGGTTCAATTGACAAAACAACAATCGAAGCCCACAACATTTGACATTGAAATTTTGTAAAATATATTTATATTCTAAACCAGGGTTTATTTGGTTAACTATTTGAGTCAAATTCTAAAAATAAAAATAAAAGACTTTGTGTAGTTTTTAAAACTTGCTTTCATTTTTTAAAACATCAAGTAGAAAATAGAAAACAATAAGAAATTGAAAAAGTAAATATTAACTAAACAAGATGTTAGTGAATTTGAAGGCAATAGATTATTTTATCGTCGTCCAAAAAGTTCGGTTCCAAGTCATCACCCTACTTGTTTTAGGTCTTAATTTTCATCCAAAATTTATAGTGTAATGATAGAAGGGCAATATTACTGACACACGTACGCATATTTTGTAATATAGATTTGTGAAGTTAGTGTGACAATTAAGTTATATTGATGGGGTGTGTGTTTATTTGTGGAAAACCAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTTCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCACAGGATGATCTACAATCAAAATAAATATTTTACAAATGTAATTAAATGTTGTCTTCCAAATAGAATCATAAATATTATTCACCTTCATCTCATTTTGATACTGCATCAATGCATAAACTCTACAAATTGTAGTTTTATACCTTCAAAAGCTACTACATCATTGGGGAGAAACTACAATAAGAAAAGAAAGACATGCCACTGTCCAGAGAAGGACCAAATTGAAATCTTCCAAATTGTAGTTTTATACCTTCAAAAGCTACTATAATATCATAGACAACCTTTTGTTGACATCTTGAAACACTCAAAAGACCAAATTGAAACTATGAGC

Coding sequence (CDS)

ATGGCGGCAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCATACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAAAGCTGGAGACCAGGAAGAAGATCAAGAACAGGCAAAGCCGAAACCGTCGCCGCTGCGGCCCGTGGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGACAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTACATTGACCCAATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTCACTCTCCTTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTTCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCACAGGATGATCTACAATCAAAATAA

Protein sequence

MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDDLQSK

Homology

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BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-76
Identity = 145/207 (70.05%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQIN---EAAEQLKAGDQEEDQEQAK 60
           MAA ++ ++   FSM+GW  G +  +    F ISAQ     E ++Q+ A ++E+++ + +
Sbjct: 1   MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQ 60

Query: 61  PKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL 120
            K    RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL
Sbjct: 61  GKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120

Query: 121 LLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIK 180
           +LDP+NEF+W  ETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIK
Sbjct: 121 ILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIK 180

Query: 181 YNMNARVLNFSMGKPRIMFNANDLPQD 205
           YNMNARVLNFSMGKPRI+FN + LPQ+
Sbjct: 181 YNMNARVLNFSMGKPRILFN-DGLPQN 206

[Close]

BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.0e-73
Identity = 140/204 (68.63%), Postives = 161/204 (78.92%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MAA+++  +   FSM+GW  G +  K  +R  IS    E AE  ++ +    +E+   +P
Sbjct: 1   MAASSSYMACAKFSMLGWLGGRRELK--MRRVISVSPQEQAEVQESQEVNAQEEEKVKQP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
              RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTL+LD
Sbjct: 61  VQPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           P++EF+W  ETC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNM
Sbjct: 121 PTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQD 205
           NARVLNFSMGKPRI+FN +   QD
Sbjct: 181 NARVLNFSMGKPRILFNNDGQLQD 202

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BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.4e-67
Identity = 121/164 (73.78%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 49  QEEDQEQAKPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFD 108
           +E+  E+ K +P+PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYIDP TCEFD
Sbjct: 54  EEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFD 113

Query: 109 QTQMDKLTLLLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIR 168
           Q+QMDKLTL+LDP+ EF+W+ E+CNKVY+YFQELVDHYEGAPLTEYTLRLIGSD+EHYIR
Sbjct: 114 QSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIR 173

Query: 169 KMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL-------PQDD 206
           KML+DGEI+YNM+ARVLNFSMGKPR+ FN +++       PQ+D
Sbjct: 174 KMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNIEGGGDGQPQED 216

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BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.7e-59
Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 40  AAEQLKAGDQEEDQ--EQAKPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 99
           A E L    QEE+Q  E+   +  P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 100 AYIDPITCEFDQTQMDKLTLLLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLR 159
           AYI+P T  FDQTQMDKLTLLLDP++EF+W  ETC KVY  FQ+LVDHYEGA L+EYTLR
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLR 172

Query: 160 LIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 203
           LIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 LIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.7e-59
Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 40  AAEQLKAGDQEEDQ--EQAKPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 99
           A E L    QEE+Q  E+   +  P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 100 AYIDPITCEFDQTQMDKLTLLLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLR 159
           AYI+P T  FDQTQMDKLTLLLDP++EF+W  ETC KVY  FQ+LVDHYEGA L+EYTLR
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLR 172

Query: 160 LIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 203
           LIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 LIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of Cucsat.G20686 vs. NCBI nr
Match: XP_004139803.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_016125 [Cucumis sativus])

HSP 1 Score: 421 bits (1082), Expect = 1.50e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209
           NARVLNFSMGKPRIMFNANDLPQDDLQSK
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of Cucsat.G20686 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo] >KAA0041980.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa] >TYK17916.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 409 bits (1052), Expect = 5.64e-144
Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MA AAAASSYIMFSMVGWKNG QNTKHTLRFPISAQ+NEAAEQLK GDQEEDQEQA PKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209
           NARVLNFSMGKPRIMFNANDLPQDDLQS+
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of Cucsat.G20686 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida])

HSP 1 Score: 366 bits (940), Expect = 5.60e-127
Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 5   AAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPLR 64
           A ASSY++F MVGWKN  QNTK   +FPISAQINEAAEQL  GDQ+++ EQ KPKPSPLR
Sbjct: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKE-EQGKPKPSPLR 61

Query: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNE 124
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSNE
Sbjct: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121

Query: 125 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 184
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV
Sbjct: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181

Query: 185 LNFSMGKPRIMFNANDLPQDDLQSK 209
           LNFSMGKPRIMFNANDLPQD LQS+
Sbjct: 182 LNFSMGKPRIMFNANDLPQD-LQSQ 204

[Close]

BLAST of Cucsat.G20686 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364 bits (934), Expect = 4.60e-126
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPL 63
           A AASSY++FSMVGWKNG QNT+ + RFPISAQINEAAEQLK G++EE+ +  KP PSPL
Sbjct: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAK-PKPPPSPL 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSN
Sbjct: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121

Query: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181

Query: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208
           VLNFSMGKPRIMFN+NDLPQD LQS
Sbjct: 182 VLNFSMGKPRIMFNSNDLPQD-LQS 204

[Close]

BLAST of Cucsat.G20686 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima])

HSP 1 Score: 362 bits (928), Expect = 3.64e-125
Identity = 182/205 (88.78%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 6   AASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP--SPL 65
           AASSY++FSMVGWKNG QNT+ + RFPISAQINEAAEQLK G++EE    AKPKP  SPL
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEE----AKPKPPLSPL 63

Query: 66  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSN 125
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSN
Sbjct: 64  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123

Query: 126 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 185
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 186 VLNFSMGKPRIMFNANDLPQDDLQS 208
           VLNFSMGKPRIMFN+NDLPQD LQS
Sbjct: 184 VLNFSMGKPRIMFNSNDLPQD-LQS 203

[Close]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL
Match: A0A0A0K5H1 (NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 7.28e-149
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209
           NARVLNFSMGKPRIMFNANDLPQDDLQSK
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 2.73e-144
Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MA AAAASSYIMFSMVGWKNG QNTKHTLRFPISAQ+NEAAEQLK GDQEEDQEQA PKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209
           NARVLNFSMGKPRIMFNANDLPQDDLQS+
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 2.73e-144
Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60
           MA AAAASSYIMFSMVGWKNG QNTKHTLRFPISAQ+NEAAEQLK GDQEEDQEQA PKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209
           NARVLNFSMGKPRIMFNANDLPQDDLQS+
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1)

HSP 1 Score: 364 bits (934), Expect = 2.23e-126
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPL 63
           A AASSY++FSMVGWKNG QNT+ + RFPISAQINEAAEQLK G++EE+ +  KP PSPL
Sbjct: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAK-PKPPPSPL 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSN
Sbjct: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121

Query: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181

Query: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208
           VLNFSMGKPRIMFN+NDLPQD LQS
Sbjct: 182 VLNFSMGKPRIMFNSNDLPQD-LQS 204

[Close]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 1.76e-125
Identity = 182/205 (88.78%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 6   AASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP--SPL 65
           AASSY++FSMVGWKNG QNT+ + RFPISAQINEAAEQLK G++EE    AKPKP  SPL
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEE----AKPKPPLSPL 63

Query: 66  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSN 125
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSN
Sbjct: 64  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123

Query: 126 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 185
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 186 VLNFSMGKPRIMFNANDLPQDDLQS 208
           VLNFSMGKPRIMFN+NDLPQD LQS
Sbjct: 184 VLNFSMGKPRIMFNSNDLPQD-LQS 203

The following BLAST results are available for this feature:

BLAST of Cucsat.G20686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NVJ4	2.3e-76	70.05	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
A9PJQ8	9.0e-73	68.63	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
Q2V2S7	7.4e-67	73.78	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
A2XVZ1	5.7e-59	67.88	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
Q7FB12	5.7e-59	67.88	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of Cucsat.G20686 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139803.1	1.50e-148	100.00	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44...	[more]
XP_008447195.1	5.64e-144	96.17	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo...	[more]
XP_038899189.1	5.60e-127	88.78	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]	[more]
XP_022940621.1	4.60e-126	88.29	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
XP_022981611.1	3.64e-125	88.78	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima]	[more]

BLAST of Cucsat.G20686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5H1	7.28e-149	100.00	NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 ...	[more]
A0A5D3D3P2	2.73e-144	96.17	NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BGV5	2.73e-144	96.17	NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=...	[more]
A0A6J1FIZ9	2.23e-126	88.29	NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE...	[more]
A0A6J1IX15	1.76e-125	88.78	NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..72
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 86..194 e-value: 1.9E-45 score: 153.6
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G20686.T1	Cucsat.G20686.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding