Cucsat.G20647 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G20647
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein AMN1-like protein
Location	ctg62: 580487 .. 583465 (-)
RNA-Seq Expression	Cucsat.G20647
Synteny	Cucsat.G20647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTGATTGTTCATTACCACCGTCAATGTCTTTTTCTCTCTTCTTCGTTTTTTCTCATTTCTTCTCGTTTCCCTAATCCCCTAATTTCATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGTTAATCCCCTCTCTTTCTCACTCCTTCTATCGACTTTGAAATCGCAACTTGAGGGAATTATTGGGTTTTCTTTGTTTCTTCTAATGATTTGGATTTCAATTGATTGGTTCTCAATTTTTGGAGAAAACAAGTAATGTTTTCAGCCCTAATTTGGGGAACCAATTTGCTTACTTTCTGGCGTTTGCGTGTTGTACACATATGTTTTGTTTTGCACTCGTGTGATTCGAGTTCTTGTTTTGGATACAGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGGTTGGTTTGGTTTGGAATTTGTTCTTTATGTTCAACTAACTCGACCAAATTGAATTAATTTAAGTCCATTTTGTTGAACTTTTAGATTTCTCCTTGCACTCTTGAACGTTATTTGGATTTGGGTAGATGAATTTAGTTCAGAAAGAGGCCATTTTGTGTTCTGCTGAGAAAATATGATTAACTAACTTATATTTGATTAAGAAAAAAATATGGTTTAGTTGTATAGCCATTTCTATATATCGATGCTGTTCTCAGCTTCATGTTTTGACTGGAATTCATAACATCAATATTCCATGCCATTAATGTGTTAAATGCAATTATGCAACAGTAGAATTTATGTTGGGCTGATAAGTCTAACATTTTTTAAACACCAACTATCCACCAGTTGACTGGAATAGATAAGTTCTAGTTTTACTTTTAACTTTTACGACCTTACATGAACCGGTTATACTCTGTAGGTTGTTCAATGGTGTGGTATCCTTGAGTTCAATAGATAAGGTTAAGTATTGAGAAATTTTTAAATGTACATTGGACAAAATTTATACAAATTTAAATGTATAGTGGCAAAAATTATGATTTGACGAAGAAATATTTCAAGAGCTTTTGTATGTAGTACTTCCTTCTTCTCTTATGAGGCTTGGGTTATTCCAATCTATTATGCTGTAATTGTATACTGTTAATAGAAAACTTGTCATTTGATGTGTGTTCTTTATTTGTTTTCTGAAATTATAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGGTATGCAGGACACAAGTTCTGTTGATGAACGAACTTCTTTAATGTTTTCTTTATTTTCTGTTGCTGATTAGCATACTTGAAGTTTTTATATTTCTTCACTATGTTGACCTAGCAAGGTTCTACCTTTTAGTTGCAAATTCACCATTTGTTTTATTTTGAGTATCTTTTGATTAAGAAAAGTTTTAATGCAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGGTAAGTACCTACTCCCCTGCCACTGATACACTTTTGATATATATATTATTGGTTTTCTTACATCTATTTGATATGCTAGTTCCGAGAATTCATAGATAGTTTACTGCCAAGATGTTGCTATCAATTCCACTTATTTTTCAAAGTATCTTCAAGGAAAACTTAACAAAATTCCAGTTTCATATGATATATTGATGTCTTATTCGTCTATAATAATACGTAGAGCTAAGGGTCCAAGGCTTTGTTTACTTAATGATTAGAACACAAGCTTGTTGATTTCCTAATTTTGTGTGTGCTGTCATTCTGGCTCATAACAGGATATGTATATGTATGTAGTTTGTGTTTTGACTAGTAGTAATAACCTCATAACAGGATATGAACAAAAATGTTGCAGAGGGTGTCCGAGAAGTGATTACACGGCACGAAGGTCCTTGGATATTTTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGAGCTTGATACAGCTGAAATTGCCAATGGGGCACAATCCCTTCGGTGGTTGGTCTGGGTAGGGTGTCTTCTATGATCTATCCCCAATTTTGTATTTATTTTCATTATTTTCCTGCTTTCCTTTTTGGATAAAGAAAAATTACATCATTCTCTTAGGAAGTATAAGAAAGTTTGTTGATTAGGGATCATATGGTTAGATAGGTGAGTACTTCTATCATTTTGCCAAGTGCTGTCTGTGATCTATTTGTAAGGGTGAAATGTCTACTTTCCTGAAAATGTGCCTCAAGTGTAGGTTCAATGACGTATCTGGCATTTCGACAGCAAGTGAAATACAAATTCCAGTTCTTTTTTACTTCATGGTGGTCGTAGAAGTGGGATAATCTTGCATCCTTGAAAGAGTCCCACCAATTCTAATCGTTCATGCTTTCTTTTTCACTTCCTGCAGCCAAAAGTAGATAAAGATTCCTTGGAGATTTTCTCCACAGAATGCCCGCGCATTACAATAAACCCAAAGCCATCGCCTTTCGGTTTCAGGGGGAAGCAAGTTCCAGGGGAAGCATTGCCAAACATTGCATTAGATGAACACACCATAGTTGATATTGATCCCAAAACATGGGCAGTGGGCAGATCCACAGCAAGGGCCCCAATTTCTCCATCAAACACCTCAGAGTTGTCTTTAGCTGAGAAATTCAGACTTGCATTTGTGGAAAGGGACACTCGGTTAGCTCCAAAACGAGCTAAAAATGCAAGGCAACATCAAAGGCGTGCGGAGAGGGAGTGGATGACGACGAGTACAAGAGCCAAGGCACTGGCTTTGGCCTCTCAAGCAAGTAAAAGTTTGCAGAGTCGTACTTAGCTATTAGCTACTACTGTTTCTCTTTAAGATTTCATTATCAATAACATACAAGGTTTGACCTCTTCATCGATTCTATACCATTATGAGATCGGGTTTTAAGATTGATAAATGTATTATTACCATAGAAAAAGTAATTTCTAAAGTATCTGGCTCTTTTTCTTGAATAGGCTTGCCTATGCTCTATCATTTGAGAATTGTACATACATGTATGTAGTTGGAGATGGGAAGCAGGATATAAGTAGAGATAAAGACGAGGAGCTATACGTCAATATAAATGGTTCAATCTATCATAATTGGTAGAACTTTATAATATCA

Coding sequence (CDS)

ATGGAAACAATCGAAGAACCCAATATCATTGCGAAAACTTTTCTAAAACTTGATTTGAATCAGAAATCCAGTTCCCACCCTACTTATTCTAATACCTTCGTTAAATCTGCGTCTCTCGATTTGGATCAGAATTCCTGTTTCAAGCCTACTGCATCTCAATTCTCCGGAACAGGATTGGCCTTTGAAAGGAAGAAACCTCCAAATTTAGTCAGTTTGTGCGTTGGGGTTATTGGCAAGCATTTGGAAGATATAATTCCCGACTTAGATGTGATTAGTGCCAACTTTCCGTCAGATGTAAAGCAATCTATAGCAGCAATTGCACGAAGAAGAGAGTTACTGAACGATGATGTTATTATCTCCCTAGTAGATAGTTCGTGGGAAACCCTGGATGTTTCTGGTTCAGAAGTTTCTGATTTTGGGTTAGCAGAAATTGGCAAGACATGCAAATCTCTTAGAGCTGTGGATATTAGTCGATGCAACAAGATAACAGCTGCTGGTGTTTCTGAGCTCGTTCAGCATTGTTGTTCCTTGGAAACACTACGTTGCGGAGGGTGTCCGAGAAGTGATTACACGGCACGAAGGTCCTTGGATATTTTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGAGCTTGATACAGCTGAAATTGCCAATGGGGCACAATCCCTTCGGTGGTTGGTCTGGGTAGGGTGTCTTCTATGA

Protein sequence

METIEEPNIIAKTFLKLDLNQKSSSHPTYSNTFVKSASLDLDQNSCFKPTASQFSGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLETLRCGGCPRSDYTARRSLDIFKPRLDDIEGDSWEELDTAEIANGAQSLRWLVWVGCLL

Homology

[Close]

BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_004139789.1 (uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical protein Csa_015808 [Cucumis sativus])

HSP 1 Score: 256 bits (654), Expect = 3.99e-82
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 24  TGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 83
           +GTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN
Sbjct: 55  SGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 114

Query: 84  DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 143
           DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC
Sbjct: 115 DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 174

Query: 144 CSLETLRCG 152
           CSLETLRCG
Sbjct: 175 CSLETLRCG 183

[Close]

BLAST of Cucsat.G20647 vs. NCBI nr
Match: KAA0025152.1 (protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (628), Expect = 3.21e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]

BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_008447736.1 (PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo])

HSP 1 Score: 246 bits (628), Expect = 3.21e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]

BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_038896648.1 (uncharacterized protein LOC120084911 [Benincasa hispida])

HSP 1 Score: 235 bits (600), Expect = 5.78e-74
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKKPP+LVSLCVGVIGKHLEDIIPDLD ISANFPSDVK+S+AA+ARRR+LL
Sbjct: 54  SSGTGLPFERKKPPSLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKKSLAAVARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DD+IISL DSSWETL+VSGSEVSDFGLAE+ KTCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDIIISLADSSWETLNVSGSEVSDFGLAEVAKTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]

BLAST of Cucsat.G20647 vs. NCBI nr
Match: XP_023525892.1 (uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225 bits (573), Expect = 6.86e-70
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGLLFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ KTCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVAKTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A0A0K5D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 1.93e-82
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 24  TGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 83
           +GTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN
Sbjct: 55  SGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLN 114

Query: 84  DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 143
           DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC
Sbjct: 115 DDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHC 174

Query: 144 CSLETLRCG 152
           CSLETLRCG
Sbjct: 175 CSLETLRCG 183

[Close]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A5D3DI95 (Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001000 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 1.56e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A1S3BJ08 (uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 1.56e-78
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 28  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELLNDDVI 87
           LAFERKKPPNLVSLCVGVIGKHLEDIIPDLD ISANFPSDVKQSIAA+ARRRELLNDDVI
Sbjct: 57  LAFERKKPPNLVSLCVGVIGKHLEDIIPDLDEISANFPSDVKQSIAAVARRRELLNDDVI 116

Query: 88  ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 147
           ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE
Sbjct: 117 ISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQHCCSLE 176

Query: 148 TLRCG 152
           TLRCG
Sbjct: 177 TLRCG 181

[Close]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A6J1FL68 (uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC111446756 PE=4 SV=1)

HSP 1 Score: 223 bits (568), Expect = 1.89e-69
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

[Close]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL
Match: A0A6J1IWS7 (uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.14e-68
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 23  DTGTGLAFERKKPPNLVSLCVGVIGKHLEDIIPDLDVISANFPSDVKQSIAAIARRRELL 82
            +GTG  FERKK P+LVSLCVG++GKHLEDII DLD ISA+FPSDVKQSI AIARRR+LL
Sbjct: 54  SSGTGFPFERKKTPSLVSLCVGLVGKHLEDIISDLDEISASFPSDVKQSITAIARRRKLL 113

Query: 83  NDDVIISLVDSSWETLDVSGSEVSDFGLAEIGKTCKSLRAVDISRCNKITAAGVSELVQH 142
           +DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAGVSELVQH
Sbjct: 114 DDDVVISLADSSWETLDVSGSDVSDFGLTKVVQTCKFLRAVDISRCNKITAAGVSELVQH 173

Query: 143 CCSLETLRCG 152
           CCSLETLRCG
Sbjct: 174 CCSLETLRCG 183

The following BLAST results are available for this feature:

BLAST of Cucsat.G20647 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G20647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139789.1	3.99e-82	99.22	uncharacterized protein LOC101203553 [Cucumis sativus] >KGN44164.1 hypothetical ...	[more]
KAA0025152.1	3.21e-78	98.40	protein AMN1-like protein [Cucumis melo var. makuwa] >TYK23110.1 protein AMN1-li...	[more]
XP_008447736.1	3.21e-78	98.40	PREDICTED: uncharacterized protein LOC103490139 [Cucumis melo]	[more]
XP_038896648.1	5.78e-74	87.69	uncharacterized protein LOC120084911 [Benincasa hispida]	[more]
XP_023525892.1	6.86e-70	84.62	uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G20647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5D7	1.93e-82	99.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G210580 PE=4 SV=1	[more]
A0A5D3DI95	1.56e-78	98.40	Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BJ08	1.56e-78	98.40	uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=...	[more]
A0A6J1FL68	1.89e-69	83.08	uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1IWS7	2.14e-68	82.31	uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 148..173 e-value: 0.0061 score: 25.8 coord: 123..147 e-value: 660.0 score: 0.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 30..224 e-value: 3.5E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..349
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 36..366
None	No IPR available	PANTHER	PTHR13318:SF119	OS06G0679700 PROTEIN	coord: 36..366
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 15..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G20647.T3	Cucsat.G20647.T3	mRNA
Cucsat.G20647.T12	Cucsat.G20647.T12	mRNA
Cucsat.G20647.T11	Cucsat.G20647.T11	mRNA
Cucsat.G20647.T2	Cucsat.G20647.T2	mRNA
Cucsat.G20647.T1	Cucsat.G20647.T1	mRNA
Cucsat.G20647.T7	Cucsat.G20647.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex