Cucsat.G20637 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G20637
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	PHD finger protein EHD3-like
Location	ctg62: 249509 .. 250680 (-)
RNA-Seq Expression	Cucsat.G20637
Synteny	Cucsat.G20637

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGATTCCTCTTAAGAGTTGGTACTGTGCTACTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGTAGTGTGTGACAGGTTGAATACACCCACGACGCTAGCCAATGGAGTTGATGGAATTCTGGAAACAAGTGAACACAATCATTTTGATGGGGACGAGAATCCGAAGTATTGTATGGATGATGGTACTGAACAACTGAAGGACGGAAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGAAGTAGAAGGTGATGAGAAATATATAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAAAAGCAGTTAAAATCTTACGATGCATGCTGGTATTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCACCACTTGCTGCAATTCCTAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCAGGCAATACGCAGCGTAAAAATGGCATATGAGAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATGTGGAAATTCGGGCAAGAAACGGATAAATGGAGGTGATGAGGAATCAGATATAGGAAGGGGGGGAATGGATATGCTTCTCACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTGATATAAATATTTGATTCGACAGATGGTCTGAAGCACCAAAATTCCATGCAACTGATTACACATTTTAATTCTCATAGAATTTTGTTTCATTATGTTTTCCTGGACGTAAATTACGTTAGGTTTTGGACACTTAGATATGCTGACTTTTCAAAATTTGTTACTTGGAATGATGTAGGGCTGTGTAAAAGAAACCTGGCACATCTTAAAATGAAGAATCTGAAAAACCAGGATGCTGTTTGAGTCAAAGGAGAACCAGGTGATAATCAACCTTGTATTGTTTTACTCATTTTGTACCATGAAGTATATAATCTTCGGGGATCAATGTCTGATGTTTCGACTCTGTTGTAAAATCCGTTTAACACAGTGACAATCAAAGGAAATGATGCCTTTTTGTACGTATTCTTAGGCATTCTTTATTTCTTAATTAGCATTTGATATTTTAG

Coding sequence (CDS)

GAGATTCCTCTTAAGAGTTGGTTGAATACACCCACGACGCTAGCCAATGGAGTTGATGGAATTCTGGAAACAAGTGAACACAATCATTTTGATGGGGACGAGAATCCGAAGTATTGTATGGATGATGGTACTGAACAACTGAAGGACGGAAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGAAGTAGAAGGTGATGAGAAATATATAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAAAAGCAGTTAAAATCTTACGATGCATGCTGGTATTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCACCACTTGCTGCAATTCCTAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCAGGCAATACGCAGCGTAAAAATGGCATATGAGAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATGTGGAAATTCGGGCAAGAAACGGATAAATGGAGGTGATGAGGAATCAGATATAGGAAGGGGGGGAATGGATATGCTTCTCACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTGA

Protein sequence

EIPLKSWLNTPTTLANGVDGILETSEHNHFDGDENPKYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLANL

Homology

[Close]

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot
Match: Q6ZJM9 (PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30
Identity = 62/142 (43.66%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 56  CKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQL----KSYDACWYCPSCLCRACLI 115
           CK CG   + D+++++C H +C +K YH RCL   QL    +    CWYCPSCLCR C  
Sbjct: 423 CKHCGTCEDDDKRFMVCGHPYCVYKFYHIRCLKTSQLAIEQQKKLGCWYCPSCLCRGCFQ 482

Query: 116 NQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIRSVKMAYENFENKQ 175
           ++DDD+IV+CDGCD G+HIYCMRP    IPKGKW+C+ C   I+        YE+   K 
Sbjct: 483 DKDDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCTFCK--IRRAAEGMHKYEDSVLKI 542

Query: 176 SKRGKDTCGNSGKKRINGGDEE 194
               K  C  +  K   G   E
Sbjct: 543 HGNSKHACNVNQSKDSEGDGTE 562

[Close]

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot
Match: Q6PDK2 (Histone-lysine N-methyltransferase 2D OS=Mus musculus OX=10090 GN=Kmt2d PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 47/155 (30.32%), Postives = 71/155 (45.81%), Query Frame = 0


Query: 4    LKSWLNTPTTLANGVDGILETSEHNHFDGDENPKYCMDDGTEQLKDGKDLGPCKICGNEV 63
            LKS  ++  TL   +D      E    D        +   T++    +D+  C +CG+  
Sbjct: 1286 LKSTTSSVETLVADIDSSPSKEEEEEDDDTMQNTVVLFSNTDKFVLMQDM--CVVCGSFG 1345

Query: 64   EGDEKYII-CSHLFCPHKCYHTRCLTKKQLK-SYDACWYCPSCL-CRACLINQDDDKIVL 123
             G E +++ CS      +CYH  C+  K  K      W C  C+ C  C    D  +++L
Sbjct: 1346 RGAEGHLLACSQC---SQCYHPYCVNSKITKVMLLKGWRCVECIVCEVCGQASDPSRLLL 1405

Query: 124  CDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQ 156
            CD CD  +H YC+ PPL  +PKG W C  C + +Q
Sbjct: 1406 CDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQ 1435

[Close]

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot
Match: O14686 (Histone-lysine N-methyltransferase 2D OS=Homo sapiens OX=9606 GN=KMT2D PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 56   CKICGNEVEGDEKYII-CSHLFCPHKCYHTRCLTKKQLK-SYDACWYCPSCL-CRACLIN 115
            C +CG+   G E +++ CS      +CYH  C+  K  K      W C  C+ C  C   
Sbjct: 1380 CVVCGSFGRGAEGHLLACSQC---SQCYHPYCVNSKITKVMLLKGWRCVECIVCEVCGQA 1439

Query: 116  QDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQ 156
             D  +++LCD CD  +H YC+ PPL  +PKG W C  C + +Q
Sbjct: 1440 SDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQ 1479

[Close]

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot
Match: P41229 (Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 8.5e-13
Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = 0


Query: 48  KDGKDLGPCKICGNEVEGD-------EKYIICSHLFCPHKCYHTRCLTKKQLKSYDACWY 107
           K+G +  P  +   E+ GD        K  + S     H       +T +  +++    +
Sbjct: 262 KEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTKMTMRLRRNHSNAQF 321

Query: 108 CPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKC 151
             S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W C KC
Sbjct: 322 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371

[Close]

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot
Match: Q8NEZ4 (Histone-lysine N-methyltransferase 2C OS=Homo sapiens OX=9606 GN=KMT2C PE=1 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 8.5e-13
Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 56   CKICGNEVEGDE-KYIICSHLFCPHKCYHTRCLTKKQLK-SYDACWYCPSC-LCRACLIN 115
            C +CG+  +G E + + CS      +CYH  C++ K  K      W C  C +C AC   
Sbjct: 960  CVVCGSFGQGAEGRLLACSQC---GQCYHPYCVSIKITKVVLSKGWRCLECTVCEACGKA 1019

Query: 116  QDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKC 151
             D  +++LCD CD  +H YC+ PPL  +PKG W C  C
Sbjct: 1020 TDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 1054

[Close]

BLAST of Cucsat.G20637 vs. NCBI nr
Match: XP_031744614.1 (PHD finger protein EHD3 isoform X2 [Cucumis sativus])

HSP 1 Score: 464 bits (1195), Expect = 2.08e-160
Identity = 220/242 (90.91%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGVDGILETSEHNHFDGDENPKY
Sbjct: 309 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVDGILETSEHNHFDGDENPKY 368

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 369 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 428

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 429 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 488

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA
Sbjct: 489 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 548

[Close]

BLAST of Cucsat.G20637 vs. NCBI nr
Match: XP_004139798.1 (PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744612.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744613.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >KAE8646065.1 hypothetical protein Csa_016584 [Cucumis sativus])

HSP 1 Score: 464 bits (1195), Expect = 4.53e-160
Identity = 220/242 (90.91%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGVDGILETSEHNHFDGDENPKY
Sbjct: 333 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVDGILETSEHNHFDGDENPKY 392

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 393 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 452

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 453 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 512

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA
Sbjct: 513 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 572

[Close]

BLAST of Cucsat.G20637 vs. NCBI nr
Match: TYK23258.1 (remodeling and spacing factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 442 bits (1138), Expect = 1.97e-151
Identity = 210/242 (86.78%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGV+GILETSEHNHF GD NPKY
Sbjct: 333 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKY 392

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYI+CSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 393 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDAC 452

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 453 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 512

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDT GN GKKR NGG+EESD G GGMDMLLTAAKTLNYEEGLA
Sbjct: 513 SVKMAYENFENKQSKRGKDTFGNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLA 572

[Close]

BLAST of Cucsat.G20637 vs. NCBI nr
Match: XP_016900482.1 (PREDICTED: remodeling and spacing factor 1 [Cucumis melo])

HSP 1 Score: 442 bits (1138), Expect = 2.09e-151
Identity = 210/242 (86.78%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGV+GILETSEHNHF GD NPKY
Sbjct: 335 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKY 394

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYI+CSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 395 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDAC 454

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 455 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 514

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDT GN GKKR NGG+EESD G GGMDMLLTAAKTLNYEEGLA
Sbjct: 515 SVKMAYENFENKQSKRGKDTFGNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLA 574

[Close]

BLAST of Cucsat.G20637 vs. NCBI nr
Match: XP_038897858.1 (PHD finger protein EHD3 [Benincasa hispida])

HSP 1 Score: 409 bits (1052), Expect = 6.70e-138
Identity = 203/246 (82.52%), Postives = 207/246 (84.15%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LN PTTLANGVD ILETSEHNH  GDENP Y
Sbjct: 370 EIPLKSWYCANCIASGFSLRHDNCVVCERLNIPTTLANGVDVILETSEHNH--GDENPNY 429

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEV-EGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDA 120
           CM+DGTEQLK+GKDLGPCKICGN V EGD+KY ICSHLFCPHK YH RCLT KQLKSYD 
Sbjct: 430 CMEDGTEQLKEGKDLGPCKICGNGVVEGDDKYRICSHLFCPHKYYHIRCLTMKQLKSYDT 489

Query: 121 CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAI 180
           CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAI
Sbjct: 490 CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAI 549

Query: 181 RSVKMAYENFENKQSKRGKDTCG---NSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYE 220
           RSVKMAYENFENKQSKRGKDT G   NSGK+RINGGDEESD GRGGMDMLLTAAKTLNYE
Sbjct: 550 RSVKMAYENFENKQSKRGKDTFGVYGNSGKERINGGDEESDTGRGGMDMLLTAAKTLNYE 609

[Close]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL
Match: A0A0A0K3U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219240 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 1.88e-164
Identity = 220/242 (90.91%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGVDGILETSEHNHFDGDENPKY
Sbjct: 60  EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVDGILETSEHNHFDGDENPKY 119

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 120 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 179

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 180 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 239

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA
Sbjct: 240 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 299

[Close]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL
Match: A0A5D3DIH3 (Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003110 PE=4 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 9.52e-152
Identity = 210/242 (86.78%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGV+GILETSEHNHF GD NPKY
Sbjct: 333 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKY 392

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYI+CSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 393 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDAC 452

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 453 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 512

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDT GN GKKR NGG+EESD G GGMDMLLTAAKTLNYEEGLA
Sbjct: 513 SVKMAYENFENKQSKRGKDTFGNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLA 572

[Close]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL
Match: A0A1S4DWX3 (remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 1.01e-151
Identity = 210/242 (86.78%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPTTLANGV+GILETSEHNHF GD NPKY
Sbjct: 335 EIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANPKY 394

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYI+CSHLFCPHKCYHTRCLTKKQLKSYDAC
Sbjct: 395 CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYDAC 454

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR
Sbjct: 455 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 514

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
           SVKMAYENFENKQSKRGKDT GN GKKR NGG+EESD G GGMDMLLTAAKTLNYEEGLA
Sbjct: 515 SVKMAYENFENKQSKRGKDTFGNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNYEEGLA 574

[Close]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL
Match: A0A6J1F863 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 3.98e-136
Identity = 192/242 (79.34%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPT LANGV  ILETSEHNHF GD+NP Y
Sbjct: 370 EIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNPNY 429

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           C DDG EQLKD +DLGPCKICGN VEG +KY +CSHLFCPH+ YHTRCLTK QLKSYD C
Sbjct: 430 CTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYDTC 489

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACLINQDDDKIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGIQAIR
Sbjct: 490 WYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQAIR 549

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
            VKMAYENFENK+SKRGKDT G SGKKRINGGDEESD GRGGMDMLLTAAKTLNYEEGL 
Sbjct: 550 RVKMAYENFENKRSKRGKDTFGKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNYEEGLT 609

[Close]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL
Match: A0A6J1IEM0 (PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV=1)

HSP 1 Score: 404 bits (1037), Expect = 5.63e-136
Identity = 191/242 (78.93%), Postives = 200/242 (82.64%), Query Frame = 0


Query: 1   EIPLKSW----------------------LNTPTTLANGVDGILETSEHNHFDGDENPKY 60
           EIPLKSW                      LNTPT LANGV  ILETSEHNHF GD+NP Y
Sbjct: 370 EIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNPNY 429

Query: 61  CMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYDAC 120
           C DDG EQLKD +DLGPCKICGN VEG +KY +CSHLFCPH+ YHTRCLTK QLKSYD C
Sbjct: 430 CTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYDTC 489

Query: 121 WYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQAIR 180
           WYCPSCLCRACL+NQDDDKIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGIQAIR
Sbjct: 490 WYCPSCLCRACLVNQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQAIR 549

Query: 181 SVKMAYENFENKQSKRGKDTCGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNYEEGLA 220
            VKMAYENFENK+SKRGKDT G SGKKRINGGDEESD GRGGMDMLLTAAKTLNYEEGL 
Sbjct: 550 RVKMAYENFENKRSKRGKDTFGKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNYEEGLT 609

The following BLAST results are available for this feature:

BLAST of Cucsat.G20637 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZJM9	2.6e-30	43.66	PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV...	[more]
Q6PDK2	2.0e-14	30.32	Histone-lysine N-methyltransferase 2D OS=Mus musculus OX=10090 GN=Kmt2d PE=1 SV=...	[more]
O14686	2.9e-13	35.92	Histone-lysine N-methyltransferase 2D OS=Homo sapiens OX=9606 GN=KMT2D PE=1 SV=2	[more]
P41229	8.5e-13	33.64	Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2	[more]
Q8NEZ4	8.5e-13	37.76	Histone-lysine N-methyltransferase 2C OS=Homo sapiens OX=9606 GN=KMT2C PE=1 SV=3	[more]

BLAST of Cucsat.G20637 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744614.1	2.08e-160	90.91	PHD finger protein EHD3 isoform X2 [Cucumis sativus]	[more]
XP_004139798.1	4.53e-160	90.91	PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger ...	[more]
TYK23258.1	1.97e-151	86.78	remodeling and spacing factor 1 [Cucumis melo var. makuwa]	[more]
XP_016900482.1	2.09e-151	86.78	PREDICTED: remodeling and spacing factor 1 [Cucumis melo]	[more]
XP_038897858.1	6.70e-138	82.52	PHD finger protein EHD3 [Benincasa hispida]	[more]

BLAST of Cucsat.G20637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3U8	1.88e-164	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219240 PE=4 SV=1	[more]
A0A5D3DIH3	9.52e-152	86.78	Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4DWX3	1.01e-151	86.78	remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=...	[more]
A0A6J1F863	3.98e-136	79.34	PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 ...	[more]
A0A6J1IEM0	5.63e-136	78.93	PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 55..105 e-value: 0.003 score: 26.8 coord: 108..151 e-value: 4.2E-10 score: 49.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 52..159 e-value: 1.4E-20 score: 75.4
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 106..151 e-value: 4.4E-13 score: 48.9
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 53..107 score: 8.5021
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 103..153 score: 9.8727
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..195
None	No IPR available	PANTHER	PTHR10615	HISTONE ACETYLTRANSFERASE	coord: 55..215
None	No IPR available	PANTHER	PTHR10615:SF190	D4, ISOFORM A	coord: 55..215
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 56..104
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 98..150
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 56..104 score: 8.683004
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 106..155
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 50..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G20637.T2	Cucsat.G20637.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding