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Cucsat.G18834 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGTGGGAGGAAAATGACCGACCTTTTAAGTTCTTTTTGCTTAAGGTAATTTGGATATTTCACCATTTTATTCGTTCTAAGACTCTTTATTTTATCCCAAAATTTAGCAATTTTCTCCATAACTGGCATGATCTTAGTAAAAATGGTTAGTTCTCTTAAACAAAAAAGTGGTTCAGTTGGTAGCAGATTTCACTGAAATTGCTTAACAAATCAACACGTAGCTTGGAATGTATGTCGGTTTCTTCGCCGCTTCCTTAATCGGTGTGGCTTCTGATCGTCAATGGGAATAAACATTCGACCCCACATCTTCGTTTTATCCCATTCTTCAAGAGGTATCAATTTTCTTCTCTTTTTCTCCATTTTCCTCATCGCACATTCACACTTCACATTTTTTCTGCTTCATATTCTGTCGAAACTTTCTTTCTTTCTTTATGTTGCACATCTAATTTGGCCGTTTGGGTTTATTGAAAGTGTGTTTGATTATTGGGAATTGGGTTTTCAGTATGTCATTTAATTGTGATTTCAATTGATTTATATAAGCTTTGCCATTTTCTTTCTTTATGTTGTTGGTTGCTCTGCTTGTTGCAGATGAATTGTTTGATTTTCTTACTCAAAGAAATGAAATTGGGTTTCCTTTCATTCTGAATTTGGATTACTTTGAACAGACTTCTTGACCCTTGAAATTTTCTTTAGGCAAGATGGCTGAGGTATGATATAGTTTAAGTTTCACTCCAATCTTTACTTGAAAGGGACTTTAGCTCTAGCTCCACACCCATTTCACTCCTAAATTTCTTTCACCATTGTCAAAATGTAAAGAATGAGTGATGTTTATTTTGTTTGTGTATGCAACTTCTTAACACAAGGAGGAGTCTCACAGGGTTGTATTGAATTTATACGACCTTAGCTGCGGATTGGCTCGACAGTTCTCCACAGCATTGTTGGGGAAAGCCATTGAAGGCATATGGTAAGTCTTGAGCTTTCTTAAGGTATTATGCTGTTTGGATTATCAGTATCTTTGTTTACATGTATACTTTGGTGAGTTTATCTTATGAATCAAACTTTGTAAGCCTCGTTTATGAGAAGTTTGGGTTGTGATGCCATTATGATACCGTTTTCTTCCATAACTTGAATTGGTGTAGGAAAAGTGAGCACTATTTACCTCTATACTAATATGATAATCTCTTAGTTGACTTAGCAGCAGATGAATTTGCTTTCAATCTATATTCAAAAGTCTGTAATATCACCGATTCTTAAATGATTTTGATCTCTTTTTGATAATTTTCAACTCGAAGTTGACCTAGCATATACCCTCAATCTAGAGGTCAGATGTTCCGATCCTTCCACATCACATTTTGAGTTCTGTTAAACTCAAAATTAATTCTTACCACTAAGAAATTGAGCCTCCCCTTCAAAAGTCATCCATTTGTTAATCATCTTCTGCATTGATAGTTACCTCTTACTTATGCTAGTCCTCTACTTCATAACTCAAATTCACCACAATTTCATTCTTGGATAATCAGAGCTAAATAAGGATTCATATACTGTTCAACACTGATTGAGTCGTCAAAGGATTTTGCCGTAGAAGATCTGTAGTATTTGCCATGGTAGAGTTTGGAATCTCAGTACTAGCCATGGGTATTCAGCAAAGAAAGACCACATAGGATAGATTGAAGTAGAGGATTGAAGAAAAACTAAACTTCAACTGATACCATATTCCAACTTGGGAGAGTAAACAAAACCTGTGTGTGCATTGTATTGCTATATAAATAGCTAAAGAAGAATACAAGTGGCAGTACATTCTTTAAAAATCTTGCCTAAGGAAATTTTCAAGGGTCAATCAAGATGGCTGAGGTATGATTTCCTAGAAGCACGGACACGGACACACTATCCAAACTGAAGTGTCCATGTTTCTTAGGAAAAGTAAACTGAATAACTAAAACAATCACTCAATTCAGAATACTCTAATACTGACTATTTTTTGTTTGCAAAATCTTATATTTTAGAAGAAAAAAAATCACTGAACCTTTCTTCAAACAAATAGGTTAGGTACCATCCATTCAAAAGCAATCGATTGTGAATTATAATGGTACAACGTTGTCTAAGTTTGTTCATAATAATAATCTGTGTTTCTGCTTGAAGTTTGCTAATACCACATACAATGGAGATCTTGGGCTACCATAACATATACTGACTTTGGAGTTGTTGGTTCTTTAATGCATTTCAGGCACACTGGGATTGTAGTGTATGACAATGAATACTATTACGGTGGTGGAATCTATCACAGTCTTTCTGGAAATACACCTTTTGGAACACCAATCCACGTCATTGATTTGGGCATTACTCATGTCCCGAAAGATGTGTTTGAAACTTATTTGACTGAAATCAGCCCGCGTTATACAGCTGAGTCTTACAGCTTGTTGGGTCATAATTGCAACAACTTCAGTAATGAGGTTGCTCAGTTTTTGGTTGGCTCGACCATCCCAGAATATATTCTTCAGCTTCCCAACGAAGTTAGAAGCAGTCCCATGGGCAGACTCATGCGTAAGTCAGGATAGAGATAACAATCGTAGATTCTCTTTAGTCATTATATCTATTCTTTATGCGCGGTAATGTATGTTTGTGTTGTCAGTTCCGATGATTCAGAACCTCGAAACAACATTAAAATCTGGTTCAGTTCCGAAAGTTCCACACATTAGTCATCATCAACCCACAACGACATCAGCTCCGATATCAGCCTTGGATTCTAATGTTGAAGAATCGCCAGACTGTGATGTCGAACTGTCTGGTGGTGATAGTAGCAATGCAACTAAAAGGCAGACTGCCAAGCAAAACGCAACCAAGGATTTGACACATCTGTCAATAGAGCCTGCTGCAGGGGTAGGGCAGCAGAAGTTCCCTGGGAAGACAGTTGATGAAAGTTTGGTCAACGATGCTCATGTCATGTTAGAAGACAGGATCAAAGGTGAATTTACATCGATCATGGCGACTGGGAAATATCGTGCAAGTGAAGCTGCTGCACTTGCAGTCAAGAGAGTGATGAGCAAATATAATAGACATACAAGTACTGCTGCTTCACAGCACTAGAAGGTAACATCCTTCTTCCTCCTATGTGGTTTTCTAGGATAGTTCAAGGATATGAGTAATTAAGAGCTTTGCTTCATGTACAGTTGGGGAATACTATTAAGATAACTGTTCATCTGCTGAGATTAAACATATTAAGTTCATATAATACCAACTTTGTTTCTAGTTTTAAAAATGGAAAACAAAAGTTTTACATGACATGCTCCATCTCAATTATTTCGACTGCACAAAAGTTTGTTTTCGAAATTTTCTAAAATACGAGCTATTTTGCAGATT ATGTTTGTGTTGTCAGTTCCGATGATTCAGAACCTCGAAACAACATTAAAATCTGGTTCAGTTCCGAAAGTTCCACACATTAGTCATCATCAACCCACAACGACATCAGCTCCGATATCAGCCTTGGATTCTAATGTTGAAGAATCGCCAGACTGTGATGTCGAACTGTCTGGTGGTGATAGTAGCAATGCAACTAAAAGGCAGACTGCCAAGCAAAACGCAACCAAGGATTTGACACATCTGTCAATAGAGCCTGCTGCAGGGGTAGGGCAGCAGAAGTTCCCTGGGAAGACAGTTGATGAAAGTTTGGTCAACGATGCTCATGTCATGTTAGAAGACAGGATCAAAGGTGAATTTACATCGATCATGGCGACTGGGAAATATCGTGCAAGTGAAGCTGCTGCACTTGCAGTCAAGAGAGTGATGAGCAAATATAATAGACATACAAGTACTGCTGCTTCACAGCACTAG MFVLSVPMIQNLETTLKSGSVPKVPHISHHQPTTTSAPISALDSNVEESPDCDVELSGGDSSNATKRQTAKQNATKDLTHLSIEPAAGVGQQKFPGKTVDESLVNDAHVMLEDRIKGEFTSIMATGKYRASEAAALAVKRVMSKYNRHTSTAASQH Homology
BLAST of Cucsat.G18834 vs. ExPASy Swiss-Prot
Match: Q6GLM5 (Desumoylating isopeptidase 1 OS=Xenopus laevis OX=8355 GN=desi1 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35 Identity = 74/157 (47.13%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy Swiss-Prot
Match: Q6ICB0 (Desumoylating isopeptidase 1 OS=Homo sapiens OX=9606 GN=DESI1 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32 Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy Swiss-Prot
Match: Q9CQT7 (Desumoylating isopeptidase 1 OS=Mus musculus OX=10090 GN=Desi1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31 Identity = 69/151 (45.70%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy Swiss-Prot
Match: Q4KM30 (Desumoylating isopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Desi1 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31 Identity = 69/151 (45.70%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Cucsat.G18834 vs. NCBI nr
Match: XP_004144380.1 (desumoylating isopeptidase 1 [Cucumis sativus] >XP_031739487.1 desumoylating isopeptidase 1 [Cucumis sativus] >XP_031739488.1 desumoylating isopeptidase 1 [Cucumis sativus] >XP_031739489.1 desumoylating isopeptidase 1 [Cucumis sativus] >KGN58360.1 hypothetical protein Csa_001706 [Cucumis sativus]) HSP 1 Score: 582 bits (1500), Expect = 1.84e-209 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Cucsat.G18834 vs. NCBI nr
Match: XP_008465049.1 (PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo] >XP_008465050.1 PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo] >ADN33737.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 536 bits (1380), Expect = 3.60e-191 Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Cucsat.G18834 vs. NCBI nr
Match: KAA0054870.1 (deSI-like protein sdu1 isoform X2 [Cucumis melo var. makuwa] >TYJ96598.1 deSI-like protein sdu1 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 536 bits (1380), Expect = 1.45e-190 Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Cucsat.G18834 vs. NCBI nr
Match: XP_008465051.1 (PREDICTED: deSI-like protein sdu1 isoform X2 [Cucumis melo]) HSP 1 Score: 483 bits (1244), Expect = 6.83e-171 Identity = 242/265 (91.32%), Postives = 252/265 (95.09%), Query Frame = 0
BLAST of Cucsat.G18834 vs. NCBI nr
Match: XP_038887396.1 (desumoylating isopeptidase 1 [Benincasa hispida] >XP_038887397.1 desumoylating isopeptidase 1 [Benincasa hispida]) HSP 1 Score: 458 bits (1179), Expect = 1.39e-160 Identity = 236/292 (80.82%), Postives = 250/292 (85.62%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy TrEMBL
Match: A0A0A0L8S4 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G627710 PE=3 SV=1) HSP 1 Score: 582 bits (1500), Expect = 8.90e-210 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy TrEMBL
Match: A0A1S3CMZ0 (desumoylating isopeptidase 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502756 PE=3 SV=1) HSP 1 Score: 536 bits (1380), Expect = 1.74e-191 Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy TrEMBL
Match: E5GB95 (PPPDE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 536 bits (1380), Expect = 1.74e-191 Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy TrEMBL
Match: A0A5D3BEH4 (DeSI-like protein sdu1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00170 PE=3 SV=1) HSP 1 Score: 536 bits (1380), Expect = 7.02e-191 Identity = 269/293 (91.81%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Cucsat.G18834 vs. ExPASy TrEMBL
Match: A0A1S3CPH5 (deSI-like protein sdu1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502756 PE=3 SV=1) HSP 1 Score: 483 bits (1244), Expect = 3.31e-171 Identity = 242/265 (91.32%), Postives = 252/265 (95.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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