Cucsat.G18640 (gene) Cucumber (B10) v3

Overview
NameCucsat.G18640
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionXyloglucan endotransglucosylase/hydrolase
Locationctg3379: 2724845 .. 2726131 (-)
RNA-Seq ExpressionCucsat.G18640
SyntenyCucsat.G18640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGCGGCACCCTCACGAACCTTCCTTCTCTTCCTCATCCCTATCCCTCCCTTCCTATATAAATCCTCCTTCCCCCTTCTTCTTCTCATCCGAACTTCCATCTCCATCTTCAGCTTATACCAATGGCTTCTTCCTCTGTTTTCTCAACCACTCTCTTCCTTTCTCTACTCTTCACCTCTTTCTTCCTCCCCTCCTCTGCTTCTAACTTCCACCAATCAACTGACATTACCTGGGGTGATGGTCGTGCTCAGATCCTCAACAATGGCGACCTTCTCTCTCTTTCCCTCGACAAGGCCTCCGGCTCTGGCTTTCAGTCAAGAAATGAGTATCTCTATGGAAAAATCGATATGCAAATCAAGCTCGTTCCTGGCAATTCCGCCGGCACTGTCACTGCCTACTACGTAAGTTTTTATTTAAATCAGTTCCCCTGCTTCTACTCCTGTTTTTTGTCTTCTTGATTCTTACGGAACTTTTTGTGATTTTTTAGTTGCGGTCTGAAGGGTCAACTTGGGATGAAATCGACTTCGAGTTTTTGGGTAATCTGAGCGGCGATCCTTACACTGTTCATACCAATGTCTTCAGCCAAGGAAAAGGAAACAGAGAGCAACAGTTCCATCTATGGTTTGACCCAACTGCCGATTTCCACACCTATTCAATTCTCTGGAATCCCCAACGCATTGTGTAAGTTCAATTCCAATCATAAAATCAAGCTCCCGCACTCAAAATCGAAATCGAAATTGAAAATTCCTCTGTGTTTGATTTACAGCTTCTACGTGGACGGAACACCCATCAGAGAGTTCAAGAACATGGAATCAATCGGCGTTGCCTTCCCCAAAAATCAACCAATGAGGCTTCAATCCAGTCTATGGAACGCCGACGACTGGGCAACAAGAGGTGGATTAATTAAAACCGATTGGACTCAAGCTCCGTTCACCGCATCATACAGAAACTTCAATGAGAACGCCTGCATTTGGTCATCAGGACAGTCTTCTTGTGGCTCCAATTCCTCACCGGCCGCCAGCGACAAGCCGTGGTACTCTCAGGAGTTGGATACCGATAGCGAAGGAAAGCTGAAGTGGGTTCAAAAGAACTACATGATCTACAATTACTGCACTGACGTTAACCGATTTCCTCAGGGCTTGCCACCGGAGTGCAATGGCACTGCCTAAGTTTGAGTTATTCTTAATTTATTATTCTTTTATTGTTACTTTTCTTGGCCAGTATTCATTTCTATTGTATGTAATATGTATACACTCACCACCTTTGAATGTTGAACGCATCATTTATTGAATAATTTACGTTGAGGTTTGAATTTTTCTTATAAATTTCATTTTCTATTGGGAATATATTGTCCGAGTCTATTTTGGATTAATTTTATTAAGAGGTTAGGTTGAGTATAA

Coding sequence (CDS)

ATGGCTTCTTCCTCTGTTTTCTCAACCACTCTCTTCCTTTCTCTACTCTTCACCTCTTTCTTCCTCCCCTCCTCTGCTTCTAACTTCCACCAATCAACTGACATTACCTGGGGTGATGGTCGTGCTCAGATCCTCAACAATGGCGACCTTCTCTCTCTTTCCCTCGACAAGGCCTCCGGCTCTGGCTTTCAGTCAAGAAATGAGTATCTCTATGGAAAAATCGATATGCAAATCAAGCTCGTTCCTGGCAATTCCGCCGGCACTGTCACTGCCTACTACTTGCGGTCTGAAGGGTCAACTTGGGATGAAATCGACTTCGAGTTTTTGGGTAATCTGAGCGGCGATCCTTACACTGTTCATACCAATGTCTTCAGCCAAGGAAAAGGAAACAGAGAGCAACAGTTCCATCTATGGTTTGACCCAACTGCCGATTTCCACACCTATTCAATTCTCTGGAATCCCCAACGCATTGTCTTCTACGTGGACGGAACACCCATCAGAGAGTTCAAGAACATGGAATCAATCGGCGTTGCCTTCCCCAAAAATCAACCAATGAGGCTTCAATCCAGTCTATGGAACGCCGACGACTGGGCAACAAGAGGTGGATTAATTAAAACCGATTGGACTCAAGCTCCGTTCACCGCATCATACAGAAACTTCAATGAGAACGCCTGCATTTGGTCATCAGGACAGTCTTCTTGTGGCTCCAATTCCTCACCGGCCGCCAGCGACAAGCCGTGGTACTCTCAGGAGTTGGATACCGATAGCGAAGGAAAGCTGAAGTGGGTTCAAAAGAACTACATGATCTACAATTACTGCACTGACGTTAACCGATTTCCTCAGGGCTTGCCACCGGAGTGCAATGGCACTGCCTAA

Protein sequence

MASSSVFSTTLFLSLLFTSFFLPSSASNFHQSTDITWGDGRAQILNNGDLLSLSLDKASGSGFQSRNEYLYGKIDMQIKLVPGNSAGTVTAYYLRSEGSTWDEIDFEFLGNLSGDPYTVHTNVFSQGKGNREQQFHLWFDPTADFHTYSILWNPQRIVFYVDGTPIREFKNMESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQSSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA
Homology
[Close]
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match: Q38857 (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-45
Identity = 76/116 (65.52%), Postives = 95/116 (81.90%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MES+G  FPKN+PMR+ SSLWNADDWATRGGL+KTDW++APFTASYR F + AC+WS+G+
Sbjct: 166 MESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGK 225

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPEC 117
           SSC + S    +   W SQELD+ ++ +++WVQ+NYMIYNYCTD  RFPQGLP EC
Sbjct: 226 SSCPNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281

[Close]
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-42
Identity = 78/116 (67.24%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MES G  FPKNQPMR+ SSLWNA++WATRGGL+KTDW++APFTASYR FNE AC+  +GQ
Sbjct: 169 MESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQ 228

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPEC 117
           SSC  N S   S   W SQELD+  + +++WVQ NYMIYNYCTD  RFPQGLP EC
Sbjct: 229 SSC-PNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283

[Close]
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match: Q9FI31 (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana OX=3702 GN=XTH20 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.4e-40
Identity = 70/116 (60.34%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           E++GV FPK+QPMRL +SLW A+ WATRGGL KTDW++APFTA YRN+N +AC+WS+G+S
Sbjct: 174 EALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKS 233

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECN 118
           SC +NSS       W++Q LD   + ++KW Q+ YM+YNYCTD  RFPQG PPEC+
Sbjct: 234 SCSANSS-------WFTQVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPECS 282

[Close]
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match: Q38907 (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana OX=3702 GN=XTH25 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-38
Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           ++ +G+ +PK QPMRL SSLWNAD WATRGGL+KTDW++APFTASYRNF  +AC+ S G+
Sbjct: 173 LQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGR 232

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPEC 117
           SSC     PA S + W+SQ LD  +E K++ VQ+ YMIYNYCTD  RFPQG P EC
Sbjct: 233 SSC-----PAGSPR-WFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282

[Close]
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match: O80803 (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana OX=3702 GN=XTH17 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-37
Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           E+IGV FP  QPMRL +SLW A+ WATRGGL KTDW++APFTA YRN+N + C+W++G+S
Sbjct: 174 EAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKS 233

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPEC 117
           SC +NS       PW++Q+LD++ + ++K VQ  YMIYNYCTD  RFP+G+P EC
Sbjct: 234 SCSANS-------PWFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281

[Close]
BLAST of Cucsat.G18640 vs. NCBI nr
Match: NP_001267579.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cucumis sativus] >KGN65441.1 hypothetical protein Csa_019591 [Cucumis sativus] >CAD87534.1 putative xyloglucan endotransglycosylase [Cucumis sativus] >CAD87536.1 putative xyloglucan endotransglycosylase [Cucumis sativus])

HSP 1 Score: 262 bits (670), Expect = 3.66e-86
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ
Sbjct: 172 MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 231

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA
Sbjct: 232 SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 291

[Close]
BLAST of Cucsat.G18640 vs. NCBI nr
Match: XP_008453618.2 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo] >TYK11849.1 putative xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo var. makuwa])

HSP 1 Score: 257 bits (656), Expect = 4.89e-84
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQAPFTASYRNFNENACIWSSGQ
Sbjct: 172 MESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNENACIWSSGQ 231

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SSCGSNSSPAA DKPWYSQELDTDS+GKLKWVQKNYMIYNYCTDVNRFPQGLPPECN TA
Sbjct: 232 SSCGSNSSPAAEDKPWYSQELDTDSQGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNATA 291

[Close]
BLAST of Cucsat.G18640 vs. NCBI nr
Match: XP_038878630.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida])

HSP 1 Score: 246 bits (629), Expect = 6.16e-80
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           ESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQAPFTA+YRNFNENACIWSSGQS
Sbjct: 173 ESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTAAYRNFNENACIWSSGQS 232

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SCGSNSSPAA DK WYSQELD+DS+GKLKWVQ NYMIYNYCTD+NRFPQGLPPECN TA
Sbjct: 233 SCGSNSSPAADDKSWYSQELDSDSQGKLKWVQDNYMIYNYCTDINRFPQGLPPECNATA 291

[Close]
BLAST of Cucsat.G18640 vs. NCBI nr
Match: KAG6589716.1 (putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (612), Expect = 2.13e-77
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           ESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQ+PFTASYRNFNENACIWSSGQS
Sbjct: 170 ESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQSPFTASYRNFNENACIWSSGQS 229

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SCGSNSSP + DK W+SQELD+DS+GK+ WVQKNYMIYNYCTDV RFPQGLPPECN TA
Sbjct: 230 SCGSNSSPTSDDKSWFSQELDSDSQGKMNWVQKNYMIYNYCTDVKRFPQGLPPECNATA 288

[Close]
BLAST of Cucsat.G18640 vs. NCBI nr
Match: XP_022922053.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita moschata])

HSP 1 Score: 239 bits (611), Expect = 3.03e-77
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           ESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDW+QAPFTASYRNFNENACIWSSGQS
Sbjct: 170 ESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWSQAPFTASYRNFNENACIWSSGQS 229

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SCGSNSSP + DK W+SQELD+DS+GK+ WVQKNYMIYNYCTDV RFPQGLPPECN TA
Sbjct: 230 SCGSNSSPTSDDKSWFSQELDSDSQGKMNWVQKNYMIYNYCTDVKRFPQGLPPECNATA 288

[Close]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match: Q84JB9 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=XTH3 PE=2 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.77e-86
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ
Sbjct: 172 MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 231

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA
Sbjct: 232 SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 291

[Close]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match: A0A5D3CNM5 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00710 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 2.37e-84
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQAPFTASYRNFNENACIWSSGQ
Sbjct: 172 MESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNENACIWSSGQ 231

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SSCGSNSSPAA DKPWYSQELDTDS+GKLKWVQKNYMIYNYCTDVNRFPQGLPPECN TA
Sbjct: 232 SSCGSNSSPAAEDKPWYSQELDTDSQGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNATA 291

[Close]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match: A0A1S3BW47 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC103494277 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 2.37e-84
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQ 60
           MESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQAPFTASYRNFNENACIWSSGQ
Sbjct: 172 MESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNENACIWSSGQ 231

Query: 61  SSCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SSCGSNSSPAA DKPWYSQELDTDS+GKLKWVQKNYMIYNYCTDVNRFPQGLPPECN TA
Sbjct: 232 SSCGSNSSPAAEDKPWYSQELDTDSQGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNATA 291

[Close]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match: A0A6J1E5H9 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111430118 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 1.46e-77
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           ESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDW+QAPFTASYRNFNENACIWSSGQS
Sbjct: 170 ESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWSQAPFTASYRNFNENACIWSSGQS 229

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SCGSNSSP + DK W+SQELD+DS+GK+ WVQKNYMIYNYCTDV RFPQGLPPECN TA
Sbjct: 230 SCGSNSSPTSDDKSWFSQELDSDSQGKMNWVQKNYMIYNYCTDVKRFPQGLPPECNATA 288

[Close]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match: A0A6J1JMA1 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111485684 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 4.18e-77
Identity = 106/119 (89.08%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 2   ESIGVAFPKNQPMRLQSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNENACIWSSGQS 61
           ESIGVAFPKNQPMRLQSSLWNADDWATRGGL+KTDWTQAPFTASYRNFNENACIWSSGQS
Sbjct: 170 ESIGVAFPKNQPMRLQSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNENACIWSSGQS 229

Query: 62  SCGSNSSPAASDKPWYSQELDTDSEGKLKWVQKNYMIYNYCTDVNRFPQGLPPECNGTA 120
           SCGSNSSP +  K W+SQELD+DS+GK+ WVQKNYMIYNYCTDV RFPQGLPPECN TA
Sbjct: 230 SCGSNSSPTSDHKSWFSQELDSDSQGKMNWVQKNYMIYNYCTDVKRFPQGLPPECNATA 288

The following BLAST results are available for this feature:
BLAST of Cucsat.G18640 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q388573.5e-4565.52Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=... [more]
Q389102.8e-4267.24Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha... [more]
Q9FI313.4e-4060.34Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana OX=... [more]
Q389071.9e-3862.07Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis tha... [more]
O808031.2e-3758.26Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis tha... [more]
BLAST of Cucsat.G18640 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_001267579.13.66e-86100.00probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cu... [more]
XP_008453618.24.89e-8496.67PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumi... [more]
XP_038878630.16.16e-8092.44probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida... [more]
KAG6589716.12.13e-7789.08putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbit... [more]
XP_022922053.13.03e-7789.08probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita moschat... [more]
BLAST of Cucsat.G18640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Q84JB91.77e-86100.00Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=XTH3 PE=... [more]
A0A5D3CNM52.37e-8496.67Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BW472.37e-8496.67Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC10349427... [more]
A0A6J1E5H91.46e-7789.08Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1JMA14.18e-7789.08Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008264Beta-glucanasePRINTSPR00737GLHYDRLASE16coord: 61..79
score: 25.0
coord: 137..154
score: 46.3
coord: 119..132
score: 38.1
IPR010713Xyloglucan endo-transglycosylase, C-terminalPFAMPF06955XET_Ccoord: 243..287
e-value: 2.0E-20
score: 72.4
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 31..209
e-value: 9.0E-62
score: 207.7
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 15..217
score: 30.602657
IPR016455Xyloglucan endotransglucosylase/hydrolasePIRSFPIRSF005604EndGlu_transfcoord: 1..291
e-value: 3.1E-117
score: 388.8
IPR016455Xyloglucan endotransglucosylase/hydrolaseCDDcd02176GH16_XETcoord: 25..287
e-value: 3.56688E-156
score: 434.319
NoneNo IPR availableGENE3D2.60.120.200coord: 18..290
e-value: 1.9E-110
score: 370.5
NoneNo IPR availablePANTHERPTHR31062:SF178XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASEcoord: 15..288
IPR044791Beta-glucanase/XTHPANTHERPTHR31062XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 15..288
IPR008263Glycoside hydrolase, family 16, active sitePROSITEPS01034GH16_1coord: 103..113
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 29..288

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G18640.T1Cucsat.G18640.T1mRNA
Cucsat.G18640.T3Cucsat.G18640.T3mRNA
Cucsat.G18640.T2Cucsat.G18640.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0071555 cell wall organization
biological_process GO:0010411 xyloglucan metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006073 cellular glucan metabolic process
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity