Cucsat.G18612 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18612
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	sodium transporter HKT1-like
Location	ctg3379: 2160904 .. 2163854 (-)
RNA-Seq Expression	Cucsat.G18612
Synteny	Cucsat.G18612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATATTTACAAGTTGGGGATGCTTAAATTATTAGCTTTTTCTTTGAAATTTACATATGATTATGGTTTTTAGGTATCTCCCACCATACACAACTTTTTTACCCATAAGGAACAACAAAGAGAGAGCTTCAATAATGACTGATGGGAAGAACAGAAGACAATACTTAGTGGAATTATTCACATTCTCACAGCTCTCTTATTTGGCCATTTTTATCATTCTCATATGCATCACTGAGAAGCAAAAATTAAGAGATGATCCTCTTAACTTTACTCTCCTCAACATCACCATTGAAGTCATCAGGTAACTTCAAAATTCAAATTATAAGTCAACTGTAGGAACAAAAAGGTTTTATATATTCATTTATATATAATGTTGAATATGGCAGTGCATATGGAAATGTTGGATTCTCAAGTGGGTATAGCTGCAAAAGACAAATTAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGGTGGAGTTCAAAGGGAAAATTCATTCTTATTCTTGTCATGATTTTTGGAAGAATGAAAAGTTTTACTATGCATACTGGTAAAGCTTGGAAATTATCATAACAATTACCCTAGCTTTATTATATATATACACACACACATATATAATAAATGTTATATGTTGTATTTAGGTTATTACCAGACGAGACTTCTTTATGCTGTAATATAATGTAAAGGCAAGTCTTGCTTTTATACCAAGTTGATTGAAACTATAAGGTAATTAATTACATTGTGTGTACCGTATAACAATTTGGCAACTTTGGTTAAGGTATTGTATACTTTGTTTCTCTAAAGTTTCTTCTAAA

Coding sequence (CDS)

ATGATTATGGTTTTTAGGTATCTCCCACCATACACAACTTTTTTACCCATAAGGAACAACAAAGAGAGAGCTTCAATAATGACTGATGGGAAGAACAGAAGACAATACTTAGTGGAATTATTCACATTCTCACAGCTCTCTTATTTGGCCATTTTTATCATTCTCATATGCATCACTGAGAAGCAAAAATTAAGAGATGATCCTCTTAACTTTACTCTCCTCAACATCACCATTGAAGTCATCAGTGCATATGGAAATGTTGGATTCTCAAGTGGGTATAGCTGCAAAAGACAAATTAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGGTGGAGTTCAAAGGGAAAATTCATTCTTATTCTTGTCATGATTTTTGGAAGAATGAAAAGTTTTACTATGCATACTGGTAAAGCTTGGAAATTATCATAA

Protein sequence

MIMVFRYLPPYTTFLPIRNNKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHTGKAWKLS

Homology

[Close]

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot
Match: Q84TI7 (Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72
Identity = 135/246 (54.88%), Postives = 178/246 (72.36%), Query Frame = 0


Query: 5   KVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDGIWD 64
           K++ + E+ YILKN +KMGYSHLL    C  L VTV GF++ QL+ FC+ EW +     +
Sbjct: 258 KITKRDEYGYILKNHNKMGYSHLLSVRLCVLLGVTVLGFLIIQLLFFCAFEWTSES--LE 317

Query: 65  GLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNNK-- 124
           G++ Y+K V SLFQV NSRHTGE+IVD+S +S AILV+F++MMYLPPYT F+P+   K  
Sbjct: 318 GMSSYEKLVGSLFQVVNSRHTGETIVDLSTLSPAILVLFILMMYLPPYTLFMPLTEQKTI 377

Query: 125 ERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVI 184
           E+     D +N ++        SQLS+L I I LI ITE+Q L+ DP+NF +LNIT+EVI
Sbjct: 378 EKEGGDDDSENGKKVKKSGLIVSQLSFLTICIFLISITERQNLQRDPINFNVLNITLEVI 437

Query: 185 SAYGNVGFSSGYSCKRQIKV-DSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHT 244
           SAYGNVGF++GYSC+R++ + D  CKDA YGFAGRWS  GKF+LI+VM +GR K FT  +
Sbjct: 438 SAYGNVGFTTGYSCERRVDISDGGCKDASYGFAGRWSPMGKFVLIIVMFYGRFKQFTAKS 497

Query: 245 GKAWKL 248
           G+AW L
Sbjct: 498 GRAWIL 501

[Close]

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot
Match: Q6H501 (Probable cation transporter HKT6 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT6 PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 7.2e-69
Identity = 127/246 (51.63%), Postives = 176/246 (71.54%), Query Frame = 0


Query: 2   AVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDG 61
           ++ K++GKK+ RYIL+    +GY HL+      +L +TV   I+ Q ++F SLEW  S  
Sbjct: 290 SLEKITGKKDCRYILEYPKAIGYKHLMSTRESVYLTLTVVSLIILQTVLFLSLEW--SSV 349

Query: 62  IWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNN 121
             DG++ YQK V++LFQ  N+RH GES+ D+S +S AILV++ +MMYLP YT+FLP  + 
Sbjct: 350 ALDGMSNYQKIVSALFQSVNARHAGESVTDLSNLSSAILVLYTIMMYLPGYTSFLPRHDG 409

Query: 122 KERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEV 181
           ++     T+  N+R+ L+E + FS +SYLAIF++LICITE+  +  DPLNF + +I  EV
Sbjct: 410 EDS---KTEKINKRKGLLENWIFSHMSYLAIFVMLICITERDSMATDPLNFNVFSILFEV 469

Query: 182 ISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHT 241
           +SAYGNVGFS GYSCKR +  D+ CKDA YGFAG+WS  GK ILI+VM+FGR+K+F M  
Sbjct: 470 VSAYGNVGFSVGYSCKRLLNHDARCKDASYGFAGKWSDNGKAILIIVMLFGRLKTFNMKG 529

Query: 242 GKAWKL 248
           G+AWKL
Sbjct: 530 GRAWKL 530

[Close]

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot
Match: Q7XPF7 (Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT7 PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-67
Identity = 123/226 (54.42%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 23  GYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDGIWDGLNPYQKFVASLFQVTNS 82
           GY+HL+P   C  LA TVA F+   + + C +EW    G   G++P++K V +LF   N+
Sbjct: 280 GYAHLMPARRCWMLAATVAAFVAVLMALVCGMEWG---GALQGMSPWEKVVNALFLAVNA 339

Query: 83  RHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNNKERASIMTDGKNRRQYLVELF 142
           RHTGES VD+S+++ AILV+FV+MMYLPPYTT+ P   N       ++ +N+   L+E  
Sbjct: 340 RHTGESTVDLSILAPAILVLFVLMMYLPPYTTWFPFEENSTTKD--SNAENQGIRLLEST 399

Query: 143 TFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVISAYGNVGFSSGYSCKRQIKV 202
             SQLSYL IF+I ICITE++KL++DPLNF++L+I +EV+SAYGNVGFS GYSC RQI  
Sbjct: 400 LLSQLSYLTIFVIAICITERRKLKEDPLNFSVLSIVVEVVSAYGNVGFSMGYSCSRQINP 459

Query: 203 DSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHTGKAWKLS 249
           D  C D W GF GRWS  GK ILI VM FGR+K F+M  GKAWKLS
Sbjct: 460 DHLCTDKWTGFVGRWSDSGKLILIFVMFFGRLKKFSMKGGKAWKLS 500

[Close]

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot
Match: A2WNZ9 (Cation transporter HKT8 OS=Oryza sativa subsp. indica OX=39946 GN=HKT8 PE=2 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-65
Identity = 115/226 (50.88%), Postives = 166/226 (73.45%), Query Frame = 0


Query: 23  GYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDGIWDGLNPYQKFVASLFQVTNS 82
           GY HLLP     FLA+TVA  +V QL +FC++EW  SDG+  GL   QK V +LF   NS
Sbjct: 330 GYHHLLPSSRTRFLALTVAVLVVAQLALFCAMEW-GSDGL-RGLTAGQKLVGALFMAVNS 389

Query: 83  RHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNNKERASIMTDGKNRRQYLV-EL 142
           RH+GE ++D+S +S A++V++VVMMYLPPYTTF+P+++  ++    +  +      + + 
Sbjct: 390 RHSGEMVLDLSTVSSAVVVLYVVMMYLPPYTTFVPVQDKHQQTGAQSGQEGSSSSSIWQK 449

Query: 143 FTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVISAYGNVGFSSGYSCKRQIK 202
              S LS LAIFI++ICITE++++ DDP+N+++LNI +EVISAYGNVGFS+GYSC RQ++
Sbjct: 450 LLMSPLSCLAIFIVVICITERRQIADDPINYSVLNIVVEVISAYGNVGFSTGYSCARQVR 509

Query: 203 VDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHTGKAWKL 248
            D SC+D W GF+G+WS +GK  L+ VM +GR+K F++H G+AWK+
Sbjct: 510 PDGSCRDLWVGFSGKWSKQGKLTLMAVMFYGRLKKFSLHGGQAWKI 553

[Close]

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot
Match: Q0JNB6 (Cation transporter HKT8 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT8 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-65
Identity = 115/226 (50.88%), Postives = 166/226 (73.45%), Query Frame = 0


Query: 23  GYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDGIWDGLNPYQKFVASLFQVTNS 82
           GY HLLP     FLA+TVA  +V QL +FC++EW  SDG+  GL   QK V +LF   NS
Sbjct: 330 GYHHLLPSSRTRFLALTVAVLVVAQLALFCAMEW-GSDGL-RGLTAGQKLVGALFMAVNS 389

Query: 83  RHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNNKERASIMTDGKNRRQYLV-EL 142
           RH+GE ++D+S +S A++V++VVMMYLPPYTTF+P+++  ++    +  +      + + 
Sbjct: 390 RHSGEMVLDLSTVSSAVVVLYVVMMYLPPYTTFVPVQDKHQQTGAQSGQEGSSSSSIWQK 449

Query: 143 FTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVISAYGNVGFSSGYSCKRQIK 202
              S LS LAIFI++ICITE++++ DDP+N+++LNI +EVISAYGNVGFS+GYSC RQ++
Sbjct: 450 LLMSPLSCLAIFIVVICITERRQIADDPINYSVLNIVVEVISAYGNVGFSTGYSCARQVR 509

Query: 203 VDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHTGKAWKL 248
            D SC+D W GF+G+WS +GK  L+ VM +GR+K F++H G+AWK+
Sbjct: 510 PDGSCRDLWVGFSGKWSKQGKLTLMAVMFYGRLKKFSLHGGQAWKI 553

[Close]

BLAST of Cucsat.G18612 vs. NCBI nr
Match: XP_004149678.1 (sodium transporter HKT1 [Cucumis sativus] >KGN65516.1 hypothetical protein Csa_019589 [Cucumis sativus])

HSP 1 Score: 500 bits (1287), Expect = 1.24e-174
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD
Sbjct: 251 MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 310

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN
Sbjct: 311 GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 370

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
           NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE
Sbjct: 371 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 430

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH
Sbjct: 431 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 490

Query: 241 TGKAWKLS 248
           TGKAWKLS
Sbjct: 491 TGKAWKLS 498

[Close]

BLAST of Cucsat.G18612 vs. NCBI nr
Match: XP_008453532.1 (PREDICTED: sodium transporter HKT1-like [Cucumis melo] >QLM00522.1 sodium transporter HKT1 [Cucumis melo])

HSP 1 Score: 461 bits (1186), Expect = 2.53e-159
Identity = 229/248 (92.34%), Postives = 238/248 (95.97%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AKV+GKKEWRYILKN+S+MGYSHLL GL CGFL VTVAGFIVFQLIIFCSLEWNNS 
Sbjct: 250 MAAAKVTGKKEWRYILKNDSEMGYSHLLSGLRCGFLVVTVAGFIVFQLIIFCSLEWNNSG 309

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKFVASLFQV NSRHTGES+VDISVISQAILV+FVVMMYLPPYTTFLPIRN
Sbjct: 310 GIWDGLNPYQKFVASLFQVINSRHTGESVVDISVISQAILVIFVVMMYLPPYTTFLPIRN 369

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE AS MTDGK+RRQ LVELFTFSQLSYLAIFIIL+CITEKQKLRDDPLNFT+LNITIE
Sbjct: 370 YKETAS-MTDGKDRRQQLVELFTFSQLSYLAIFIILLCITEKQKLRDDPLNFTVLNITIE 429

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH
Sbjct: 430 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 489

Query: 241 TGKAWKLS 248
           +GKAWKLS
Sbjct: 490 SGKAWKLS 496

[Close]

BLAST of Cucsat.G18612 vs. NCBI nr
Match: XP_038878547.1 (sodium transporter HKT1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 432 bits (1110), Expect = 7.81e-149
Identity = 213/248 (85.89%), Postives = 231/248 (93.15%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AK++GKKEWRYILKN S+MGYSHLL GL CGFLAVT  GFI+ QLIIFCSLEWNNS 
Sbjct: 179 MAAAKLTGKKEWRYILKNYSEMGYSHLLSGLRCGFLAVTAVGFIILQLIIFCSLEWNNSA 238

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKF+ SLFQVTNSRHTGES+VDISVIS AILVVFVVMMYLPPYTTFLP+RN
Sbjct: 239 GIWDGLNPYQKFMGSLFQVTNSRHTGESVVDISVISPAILVVFVVMMYLPPYTTFLPMRN 298

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE  S  + GK++RQ+LVELFTFSQLSYLAIFIILICITEK+KLRDDPLNFT+LNIT+E
Sbjct: 299 -KEITS-RSHGKDKRQHLVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLE 358

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQ+KVD SCKDAWYGFAGRWS+KGKFILILVMIFGRMK+FTMH
Sbjct: 359 VISAYGNVGFSSGYSCKRQVKVDRSCKDAWYGFAGRWSAKGKFILILVMIFGRMKTFTMH 418

Query: 241 TGKAWKLS 248
           TG+AWKLS
Sbjct: 419 TGQAWKLS 424

[Close]

BLAST of Cucsat.G18612 vs. NCBI nr
Match: XP_038878546.1 (sodium transporter HKT1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 432 bits (1110), Expect = 1.61e-147
Identity = 213/248 (85.89%), Postives = 231/248 (93.15%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AK++GKKEWRYILKN S+MGYSHLL GL CGFLAVT  GFI+ QLIIFCSLEWNNS 
Sbjct: 270 MAAAKLTGKKEWRYILKNYSEMGYSHLLSGLRCGFLAVTAVGFIILQLIIFCSLEWNNSA 329

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKF+ SLFQVTNSRHTGES+VDISVIS AILVVFVVMMYLPPYTTFLP+RN
Sbjct: 330 GIWDGLNPYQKFMGSLFQVTNSRHTGESVVDISVISPAILVVFVVMMYLPPYTTFLPMRN 389

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE  S  + GK++RQ+LVELFTFSQLSYLAIFIILICITEK+KLRDDPLNFT+LNIT+E
Sbjct: 390 -KEITS-RSHGKDKRQHLVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLE 449

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQ+KVD SCKDAWYGFAGRWS+KGKFILILVMIFGRMK+FTMH
Sbjct: 450 VISAYGNVGFSSGYSCKRQVKVDRSCKDAWYGFAGRWSAKGKFILILVMIFGRMKTFTMH 509

Query: 241 TGKAWKLS 248
           TG+AWKLS
Sbjct: 510 TGQAWKLS 515

[Close]

BLAST of Cucsat.G18612 vs. NCBI nr
Match: XP_023516517.1 (sodium transporter HKT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1036), Expect = 1.07e-136
Identity = 193/248 (77.82%), Postives = 220/248 (88.71%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AKV+GKK WRYILKN+S MGYSHLL G+ C FLA T AGFI+ QLIIFCSLEWNNSD
Sbjct: 241 MAAAKVTGKKGWRYILKNDSAMGYSHLLSGVRCRFLAATAAGFIILQLIIFCSLEWNNSD 300

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDG+NPY+K V S FQV NSRHTGES+VDIS+IS AILVVF+VMMYLPPYTTFLP+R 
Sbjct: 301 GIWDGMNPYEKVVGSFFQVINSRHTGESVVDISLISPAILVVFLVMMYLPPYTTFLPLRT 360

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE+ASI TDG ++RQ+LV+  TFSQLSYLAIFI LICI+E+ KLR+DPLNFT+LNI +E
Sbjct: 361 -KEKASITTDGNDKRQHLVKFLTFSQLSYLAIFITLICISERDKLRNDPLNFTVLNIAVE 420

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQ+  DS+C+DAWYGFAGRWS++GK ILILVM FGR+KSF+MH
Sbjct: 421 VISAYGNVGFSSGYSCKRQVVADSTCRDAWYGFAGRWSAEGKLILILVMFFGRLKSFSMH 480

Query: 241 TGKAWKLS 248
            GKAWKLS
Sbjct: 481 GGKAWKLS 487

[Close]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL
Match: A0A0A0M019 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434130 PE=3 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 5.99e-175
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD
Sbjct: 251 MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 310

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN
Sbjct: 311 GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 370

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
           NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE
Sbjct: 371 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 430

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH
Sbjct: 431 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 490

Query: 241 TGKAWKLS 248
           TGKAWKLS
Sbjct: 491 TGKAWKLS 498

[Close]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL
Match: A0A1S3BWJ7 (sodium transporter HKT1-like OS=Cucumis melo OX=3656 GN=LOC103494214 PE=3 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.23e-159
Identity = 229/248 (92.34%), Postives = 238/248 (95.97%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AKV+GKKEWRYILKN+S+MGYSHLL GL CGFL VTVAGFIVFQLIIFCSLEWNNS 
Sbjct: 250 MAAAKVTGKKEWRYILKNDSEMGYSHLLSGLRCGFLVVTVAGFIVFQLIIFCSLEWNNSG 309

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDGLNPYQKFVASLFQV NSRHTGES+VDISVISQAILV+FVVMMYLPPYTTFLPIRN
Sbjct: 310 GIWDGLNPYQKFVASLFQVINSRHTGESVVDISVISQAILVIFVVMMYLPPYTTFLPIRN 369

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE AS MTDGK+RRQ LVELFTFSQLSYLAIFIIL+CITEKQKLRDDPLNFT+LNITIE
Sbjct: 370 YKETAS-MTDGKDRRQQLVELFTFSQLSYLAIFIILLCITEKQKLRDDPLNFTVLNITIE 429

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH
Sbjct: 430 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 489

Query: 241 TGKAWKLS 248
           +GKAWKLS
Sbjct: 490 SGKAWKLS 496

[Close]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL
Match: A0A6J1JJP6 (sodium transporter HKT1 OS=Cucurbita maxima OX=3661 GN=LOC111485717 PE=3 SV=1)

HSP 1 Score: 394 bits (1012), Expect = 2.18e-133
Identity = 189/248 (76.21%), Postives = 218/248 (87.90%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           M  AKV+GKK WRYILKN+S MGYSHLL G+ CGFLA T AGFI+ Q IIFCSLEWNNSD
Sbjct: 241 MVAAKVTGKKGWRYILKNDSAMGYSHLLSGVRCGFLAATAAGFIILQFIIFCSLEWNNSD 300

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDG+NPY+K V S FQV NSRHTGES++DIS+IS AILVVF+VMMYLPPYTTFLP+R 
Sbjct: 301 GIWDGMNPYEKVVGSFFQVINSRHTGESVMDISLISPAILVVFLVMMYLPPYTTFLPLRT 360

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE+ASI  +G ++RQ+LV+  TFSQLSYLAIFI LICITE+ KL++DPLNF++LNI +E
Sbjct: 361 -KEKASI-ANGNDKRQHLVKFLTFSQLSYLAIFITLICITERDKLKNDPLNFSVLNIAVE 420

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQ+  DSSC++AWYGFAGRWS+KGK ILILVM FGR+KSF+MH
Sbjct: 421 VISAYGNVGFSSGYSCKRQVVADSSCREAWYGFAGRWSAKGKLILILVMFFGRLKSFSMH 480

Query: 241 TGKAWKLS 248
            GKAWKLS
Sbjct: 481 GGKAWKLS 486

[Close]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL
Match: A0A6J1E5E2 (sodium transporter HKT1 OS=Cucurbita moschata OX=3662 GN=LOC111429647 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 5.78e-131
Identity = 187/248 (75.40%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MAVAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSD 60
           MA AKV+GKK WRYILKN S MGYSHLL G+ C FLA T AGF++ Q IIFCSLEWNNS 
Sbjct: 241 MAAAKVTGKKGWRYILKNNSVMGYSHLLSGVRCRFLAATAAGFVILQFIIFCSLEWNNSG 300

Query: 61  GIWDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRN 120
           GIWDG+NPY+K V S FQV NSRHTGES+VDIS+IS AILVVF+VMMYLPPYTTFLP+R 
Sbjct: 301 GIWDGMNPYEKVVGSFFQVINSRHTGESVVDISLISPAILVVFLVMMYLPPYTTFLPLRT 360

Query: 121 NKERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIE 180
            KE+ASI+ DG ++RQ+ V+ FTFSQLSYLAIFI LICI+E+ KL++DPLNF++LNI +E
Sbjct: 361 -KEKASIV-DGNDKRQHSVKYFTFSQLSYLAIFITLICISERDKLKNDPLNFSVLNIAVE 420

Query: 181 VISAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMH 240
           VISAYGNVGFSSGYSCKRQ+  DS+C+DAWYGFAGRWS+KGK ILILVM FGR+KSF+ H
Sbjct: 421 VISAYGNVGFSSGYSCKRQVVADSTCRDAWYGFAGRWSAKGKLILILVMFFGRLKSFSRH 480

Query: 241 TGKAWKLS 248
            GKAWKLS
Sbjct: 481 GGKAWKLS 486

[Close]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL
Match: A0A6J1C0X2 (sodium transporter HKT1 OS=Momordica charantia OX=3673 GN=LOC111007262 PE=3 SV=1)

HSP 1 Score: 383 bits (983), Expect = 6.50e-129
Identity = 189/246 (76.83%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 3   VAKVSGKKEWRYILKNESKMGYSHLLPGLHCGFLAVTVAGFIVFQLIIFCSLEWNNSDGI 62
           + KV+GKKE RYIL N S+MGY HLL G+ C +LA T AGF++ Q+IIFCSLEWN S+G+
Sbjct: 250 MTKVTGKKELRYILNNYSEMGYPHLLSGVRCRYLAGTAAGFVILQMIIFCSLEWN-SEGL 309

Query: 63  WDGLNPYQKFVASLFQVTNSRHTGESIVDISVISQAILVVFVVMMYLPPYTTFLPIRNNK 122
           WDGLNPY+K VA+LFQVTNSRHTGES+VDISVIS AILV+FVVMMYLPPYTTFLP++N K
Sbjct: 310 WDGLNPYRKTVAALFQVTNSRHTGESVVDISVISPAILVLFVVMMYLPPYTTFLPMKN-K 369

Query: 123 ERASIMTDGKNRRQYLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFTLLNITIEVI 182
           E  S+  +GK +RQ+LV    FSQLSYLAIFIILICITEKQ+LRDDPLNFT+LNIT+EVI
Sbjct: 370 EMDSV-GNGKGKRQHLVGFLKFSQLSYLAIFIILICITEKQQLRDDPLNFTVLNITLEVI 429

Query: 183 SAYGNVGFSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFTMHTG 242
           SAYGNVGFS+GYSCKRQ+K D SCKDAWYGF GRWS KGKFILILVMIFGR+KSF+MH G
Sbjct: 430 SAYGNVGFSTGYSCKRQLKADGSCKDAWYGFVGRWSGKGKFILILVMIFGRLKSFSMHGG 489

Query: 243 KAWKLS 248
           +AWKLS
Sbjct: 490 RAWKLS 492

The following BLAST results are available for this feature:

BLAST of Cucsat.G18612 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TI7	1.4e-72	54.88	Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1	[more]
Q6H501	7.2e-69	51.63	Probable cation transporter HKT6 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT...	[more]
Q7XPF7	1.4e-67	54.42	Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT...	[more]
A2WNZ9	2.2e-65	50.88	Cation transporter HKT8 OS=Oryza sativa subsp. indica OX=39946 GN=HKT8 PE=2 SV=2	[more]
Q0JNB6	2.2e-65	50.88	Cation transporter HKT8 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT8 PE=3 SV...	[more]

BLAST of Cucsat.G18612 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149678.1	1.24e-174	100.00	sodium transporter HKT1 [Cucumis sativus] >KGN65516.1 hypothetical protein Csa_0...	[more]
XP_008453532.1	2.53e-159	92.34	PREDICTED: sodium transporter HKT1-like [Cucumis melo] >QLM00522.1 sodium transp...	[more]
XP_038878547.1	7.81e-149	85.89	sodium transporter HKT1-like isoform X2 [Benincasa hispida]	[more]
XP_038878546.1	1.61e-147	85.89	sodium transporter HKT1-like isoform X1 [Benincasa hispida]	[more]
XP_023516517.1	1.07e-136	77.82	sodium transporter HKT1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G18612 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M019	5.99e-175	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434130 PE=3 SV=1	[more]
A0A1S3BWJ7	1.23e-159	92.34	sodium transporter HKT1-like OS=Cucumis melo OX=3656 GN=LOC103494214 PE=3 SV=1	[more]
A0A6J1JJP6	2.18e-133	76.21	sodium transporter HKT1 OS=Cucurbita maxima OX=3661 GN=LOC111485717 PE=3 SV=1	[more]
A0A6J1E5E2	5.78e-131	75.40	sodium transporter HKT1 OS=Cucurbita moschata OX=3662 GN=LOC111429647 PE=3 SV=1	[more]
A0A6J1C0X2	6.50e-129	76.83	sodium transporter HKT1 OS=Momordica charantia OX=3673 GN=LOC111007262 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003445	Cation transporter	PFAM	PF02386	TrkH	coord: 45..488 e-value: 2.0E-28 score: 99.1
None	No IPR available	PANTHER	PTHR31064:SF27	SODIUM TRANSPORTER HKT1	coord: 18..492
None	No IPR available	PANTHER	PTHR31064	POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED	coord: 18..492

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18612.T7	Cucsat.G18612.T7	mRNA
Cucsat.G18612.T1	Cucsat.G18612.T1	mRNA
Cucsat.G18612.T4	Cucsat.G18612.T4	mRNA
Cucsat.G18612.T3	Cucsat.G18612.T3	mRNA
Cucsat.G18612.T5	Cucsat.G18612.T5	mRNA
Cucsat.G18612.T6	Cucsat.G18612.T6	mRNA
Cucsat.G18612.T2	Cucsat.G18612.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006813	potassium ion transport
biological_process	GO:0035725	sodium ion transmembrane transport
biological_process	GO:0006812	cation transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015081	sodium ion transmembrane transporter activity
molecular_function	GO:0008324	cation transmembrane transporter activity