Cucsat.G18496 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18496
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	F-box protein PP2-B10-like
Location	ctg3379: 2778871 .. 2781578 (+)
RNA-Seq Expression	Cucsat.G18496
Synteny	Cucsat.G18496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATACTACATTATAATTGTAATATGGTTTTGGCACTACGCTACCAAAGCAAGTTGCCATATAACCAATATTCAAAAGTAATTGTGTGGAAATGGAATTTACTATATATATTATCTATCCCTTTATCCCCAAAGTTTTAAATTCAAATTCAGTATTATTATTCTTTGGTGTTTGAACTGATGGAAGAGGAAGAAAAGGGTGAAGGAATTTCTGATTTCTCTTCGCTGCCAGAAGGAGTCGTCGCTAAAATCTTGTCGTTCACCACTCCATCGGATGCCTGTAGATCTTCTGTGGTTTCCACCACTTTCGTTGCGGCAGCGCAGTCGGACATCGTGTGGGACAGTTTCCTGCCTACCGATTGGGAGGTTTTGATTTCTCGTCGGAAACCTAGCAACCTCAATTTTGATCCAATTTCGAGTTCGAAGAAGGGCATTTTTTTCTCCCTTTGCGATACCCCTTTGATAATTGATGACGGCAACAAGGTAAACTTTTCGATTCCCCTAATTTCTCTAGAATTCAAAGTGAGTTTCATGAGTTCTCGGCGGCCGACGCAATACCTTTGGCAGCAAAAGAAAATTGTTGACTTATTTAATATTGTTTAACTTAATTATTATAATTTTACAACTTAATTTCAATTTAAACCTTCTCTTAACCTTATATCTATTTTTTATTTTTTATTGTTAACTTGAATATCAATTTTTTTTGTTCAGGATAATACCCTTTGAAAAAATTAGACTTTAGAGGGTTAATTATTTTTATCATTTTTAAATTCACTATAAAACATGTTTTTAGTTAACTTAAACTTTTATTATTTCATGTAATTATGAATATTCAGGGTGTTAAAAAGGGAATCGTGCCTAATGAGTTTCGATATAGAATTGATCGAAATTGATCATTCTGTTTTGGGATTTTCAAATTTCCAAAATTATTAATTGAAGATGAGTTGATAAGGAAAAAACTTAGATATCAAGTTGGCAACTATTTATTGTGCAACCCTTTAATGCACCTAATTAAAAGTTGTCACATGGCAATTTGATTTCTTTATAAAAAATGAAGATTTAAAAAACTTATTACTTTATGTGTTTTGGGAAAACAATAGCACAGACTAGACTGCACTTTAGTGTTGCTCGTCAATCAATGTATTCAAGTGCATATTCTATCAATATGACATGCTCTGAGTTGTTTCATGTCATAAATAAAATGTAACCACTCAAGCTATACATATTTTCACAGTTAGTTCATAATTATGTCAATAATCAAGACCAATGTGTAACTATTATGTCATTTTTCTATTAATTCATTTGCAACGTACTCGATCCAAGGGTTTGTACAAATCAAATCTAATAAAAATAATATTCAAACTAGAGGACCAAGAGTTCCACTTTTAAAACATCAGAGATCAAATACAAGCACAGTTCAAAGTTCAAATTATATGTCTAAACTTCATAGTGAACTTGGATTTCAAACAAAAGCTATTAAAATTTTATTTAAAAATGTTCACACACACTCCAAAATGGTTGATATCTAAAAATCCAATTTCTTGAATTCTATTTCATGTTTGATATCTTCTTGTAGGAAAGTTTTCAAGTATGGATTATTTGATTGTATACACCCTGGTTTGATTATTTTGATTCTCAAAGAACTGAGAAAACCAAGTGGGTCAAAACCGTACCTTCCATTCACTATCTATTTGTATGCATATAAACTTAGTGGGTTCAGTTTGTATTTGGCAGAGCTTTTCATTGGACAAATGTAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGAACTTTCAATTATTTGGAGTGATATGCCTGCCTATTGGACTTGGGAACCTCATCCTGAGTCAAGGTGTTTAACACTATTTCATTGCCTCAAATCCCATTCTTTTATCTTGTTTCTTTTTCCTCTATTCCCAATACTTTCGTTCTTTAATTTGGTGTGGAAATTAGGTTTGCTGAGGTTGCTGTTCTTCTCAACGTTTGGTGGCTTGAAATTAAAGGAAAGCTAAGCTGCAAAATGTTGAGTCCTGCAACAACTTATGCAGCTTATTTTGTGTTTAAGATGGATGAACGTAGGTATTATGGGTTTGATATAGTTGCTGCTGATGCAGCAGTGGCCATTGTTGATGGGGAATGTTGCTCCAGTAGAGTTTGTTTGGACCCCTTTTTAGACAATGCTCCACCGAAGCGTCGTCGACGCACGCCGTGTTTGAGAAGGAATCCACTCGGAAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGATGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAACGGTGGAGATGATGTTGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGCCTAATCGTTCAAGGGATAGACATTAGGCCTAAAGTTAGCCGTGATCTTGCATAGATGAGTTCTTGTCAGCTTTGTGAACCTAAGGAACTCAATGTATAGCACATTAATGCTCGATCAACTATGGTTGTTGAATGACGAAAAAGGAAAATACTCTTGCAAGCTTTAGAAATGTTATGGTCATGTATCATTCCGGTATTACTTTTACTTTTGGCTCCATGAAAATGATAACTGAAAAGTTTGCTTTGTATATAGAGAAGTTAAAGTACATTAAGTATCAATCTAAATGTTTACATTTTCATTTGTCACCTTCAAAACTAAGGTAGAAAGCATAAACTCATAAGCATATTACCTATCGTAAAAAAAAAT

Coding sequence (CDS)

ATGGAAGAGGAAGAAAAGGGTGAAGGAATTTCTGATTTCTCTTCGCTGCCAGAAGGAGTCGTCGCTAAAATCTTGTCGTTCACCACTCCATCGGATGCCTGTAGATCTTCTGTGGTTTCCACCACTTTCGTTGCGGCAGCGCAGTCGGACATCGTGTGGGACAGTTTCCTGCCTACCGATTGGGAGGTTTTGATTTCTCGTCGGAAACCTAGCAACCTCAATTTTGATCCAATTTCGAGTTCGAAGAAGGGCATTTTTTTCTCCCTTTGCGATACCCCTTTGATAATTGATGACGGCAACAAGAGCTTTTCATTGGACAAATGTAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGAACTTTCAATTATTTGGAGTGATATGCCTGCCTATTGGACTTGGGAACCTCATCCTGAGTCAAGGTTTGCTGAGGTTGCTGTTCTTCTCAACGTTTGGTGGCTTGAAATTAAAGGAAAGCTAAGCTGCAAAATGTTGAGTCCTGCAACAACTTATGCAGCTTATTTTGTGTTTAAGATGGATGAACGTAGGTATTATGGGTTTGATATAGTTGCTGCTGATGCAGCAGTGGCCATTGTTGATGGGGAATGTTGCTCCAGTAGAGTTTGTTTGGACCCCTTTTTAGACAATGCTCCACCGAAGCGTCGTCGACGCACGCCGTGTTTGAGAAGGAATCCACTCGGAAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGATGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAACGGTGGAGATGATGTTGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGCCTAATCGTTCAAGGGATAGACATTAGGCCTAAAGTTAGCCGTGATCTTGCATAG

Protein sequence

MEEEEKGEGISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSFLPTDWEVLISRRKPSNLNFDPISSSKKGIFFSLCDTPLIIDDGNKSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSKSGLIVQGIDIRPKVSRDLA

Homology

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BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-35
Identity = 85/195 (43.59%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +S  L+K SGK+C+ML A  LSIIW D P YW W P PESRF +VA L +V W EI+G+ 
Sbjct: 94  KSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRT 153

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           + ++LSP T Y+AY VFK  + + YGF  VA +AAV +V  E     +C    +     +
Sbjct: 154 NTRVLSPRTRYSAYIVFKGVD-KCYGFQNVAIEAAVGVVGQEPSRRLICFSEAI-----R 213

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGG---DDVVEFFLKEVNCN 192
           R RR                 +P++R DGW EIELGE  N+GG   +D +E    E    
Sbjct: 214 RGRR--------------NVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQL 268

Query: 193 YSKSGLIVQGIDIRP 205
             K GLI+QGI+IRP
Sbjct: 274 NRKCGLIIQGIEIRP 268

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BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34
Identity = 91/226 (40.27%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SF ++K SGKKC ML A EL+IIW D PAYW W   PES+F +VA L NV W E++GK+
Sbjct: 112 KSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKI 171

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SC MLS  T Y+ Y VFK    R YGFD+V  +A V  V        V  +    NA  +
Sbjct: 172 SCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFES--GNADSR 231

Query: 133 R-----------------RRRTPCLR-----RNPLGNSMSRAKQ---PQERHDGWFEIEL 192
                             R R P ++        +     R      P+ER DGW E+EL
Sbjct: 232 SATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVEL 291

Query: 193 GELR-NNG-----GDDVVEFFLKEVNCNYSKSGLIVQGIDIRPKVS 208
           G+   NNG     G D +E  + E      KSGLI+QGI+IRP+ S
Sbjct: 292 GKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPERS 335

[Close]

BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-32
Identity = 82/197 (41.62%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SF L+K SGK+CIML ++EL I W   P YW W   PESRF ++A LL+V W EI+GK 
Sbjct: 141 KSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKT 200

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           S ++LSP T Y+AY VFK  + R  G   +  +  + +V G+  S R     F+    P+
Sbjct: 201 SARVLSPGTRYSAYIVFKTKD-RCPGLGHLPVEVGLGLV-GQESSKR-----FIYFIGPR 260

Query: 133 RRRRTPCLRRNPLGNSMSR-AKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYS 192
            RR          G   +R   +P +R DGW E ELGE  N    D +EF + E+     
Sbjct: 261 DRR----------GRRETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSW 320

Query: 193 KSGLIVQGIDIRPKVSR 209
           KSGLI+QGI+ RP  S+
Sbjct: 321 KSGLIIQGIEFRPTKSQ 320

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BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-31
Identity = 74/198 (37.37%), Postives = 108/198 (54.55%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +S  ++K + K+CIM+ A  L+I W + P  W W P P++RF  VA LL V   EI+G++
Sbjct: 118 KSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRI 177

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVD---GECCSSRVCLDPFLDNA 132
           + +++SP T Y+AY V+K      YGF+ VA +  V +V     E C   +C D  +D  
Sbjct: 178 NSRVISPKTRYSAYIVYK-KLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQ 237

Query: 133 PPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGG---DDVVEFFLKEV 192
                      RR   G ++ +   P+ R DGW EI++GE  N GG   DD +E    E 
Sbjct: 238 ----------FRRRDRGKNLVK---PERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEA 297

Query: 193 NCNYSKSGLIVQGIDIRP 205
              + K GLI+QGI+IRP
Sbjct: 298 KQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-30
Identity = 74/192 (38.54%), Postives = 99/192 (51.56%), Query Frame = 0


Query: 14  SFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKLS 73
           SF ++K SGKKC ML AR+L I+W D P +W W   P+SRF EVA LL V W EI+GK+S
Sbjct: 84  SFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKIS 143

Query: 74  CKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPKR 133
             +LS AT Y+AY VFK  E   +GF+ +  + +      E  ++R              
Sbjct: 144 TSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTRTEVYNNR-------------- 203

Query: 134 RRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSKS 193
                            ++   + R DGW EIELGE      D+ +E  + E      K 
Sbjct: 204 -------------RVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKG 248

Query: 194 GLIVQGIDIRPK 206
           G+IVQGI+IRPK
Sbjct: 264 GIIVQGIEIRPK 248

[Close]

BLAST of Cucsat.G18496 vs. NCBI nr
Match: XP_004146303.1 (F-box protein PP2-B10 [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_019738 [Cucumis sativus])

HSP 1 Score: 415 bits (1067), Expect = 7.92e-145
Identity = 197/199 (98.99%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 101 KSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 160

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFL+NAPPK
Sbjct: 161 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLENAPPK 220

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK
Sbjct: 221 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 280

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPKVSRDLA
Sbjct: 281 SGLIVQGIDIRPKVSRDLA 299

[Close]

BLAST of Cucsat.G18496 vs. NCBI nr
Match: XP_008453631.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058311.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 396 bits (1017), Expect = 3.14e-137
Identity = 190/199 (95.48%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGARELSIIWSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 101 KSFSLDKWSGKKCIMLGARELSIIWSDMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 160

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLD APPK
Sbjct: 161 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK 220

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRR TPCLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NNGGDD VEFFLKEVNCNYSK
Sbjct: 221 RRR-TPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSK 280

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPK+SRDLA
Sbjct: 281 SGLIVQGIDIRPKISRDLA 298

[Close]

BLAST of Cucsat.G18496 vs. NCBI nr
Match: TYK09497.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 396 bits (1017), Expect = 1.46e-136
Identity = 190/199 (95.48%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGARELSIIWSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 145 KSFSLDKWSGKKCIMLGARELSIIWSDMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 204

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLD APPK
Sbjct: 205 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK 264

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRR TPCLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NNGGDD VEFFLKEVNCNYSK
Sbjct: 265 RRR-TPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSK 324

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPK+SRDLA
Sbjct: 325 SGLIVQGIDIRPKISRDLA 342

[Close]

BLAST of Cucsat.G18496 vs. NCBI nr
Match: XP_038878692.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 386 bits (992), Expect = 2.40e-133
Identity = 182/196 (92.86%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGAR+LSI+WSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 105 KSFSLDKWSGKKCIMLGARDLSIVWSDMPVYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 164

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKML PATTYAAYFVFKM ERRYYGFDIVAADAAVAIV GEC +SRVCLDPFLDNAPPK
Sbjct: 165 SCKMLCPATTYAAYFVFKMSERRYYGFDIVAADAAVAIVAGECWTSRVCLDPFLDNAPPK 224

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGEL NNGGDD +EFFLKEVNCNYSK
Sbjct: 225 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELHNNGGDDEIEFFLKEVNCNYSK 284

Query: 193 SGLIVQGIDIRPKVSR 208
           SGLIVQGIDIRPK+SR
Sbjct: 285 SGLIVQGIDIRPKISR 300

[Close]

BLAST of Cucsat.G18496 vs. NCBI nr
Match: XP_022929404.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 276 bits (705), Expect = 1.35e-89
Identity = 139/210 (66.19%), Postives = 157/210 (74.76%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGAR+L IIW+D P YWTW  HPESRF EVAVLL  WW+E++GK+
Sbjct: 100 KSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISHPESRFGEVAVLLQAWWVELRGKI 159

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLS ATTYAAYFVFKM+ER YYGFDIV ADA V IV GECC+  V LDP+LDN+  K
Sbjct: 160 SCKMLSAATTYAAYFVFKMNER-YYGFDIVPADAKVGIVGGECCTISVGLDPYLDNSQRK 219

Query: 133 RRR---------------RTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDD 192
           R+R               R    + +  G +MSR   P+ERHDGWFEIE+GE  NNGGDD
Sbjct: 220 RQRLVWMGSNAPGHRQRLRWMGSKTHTPGINMSRMALPKERHDGWFEIEMGEFHNNGGDD 279

Query: 193 VVEFFLKEVNCNYSKSGLIVQGIDIRPKVS 207
            VE  LKEVNCNYSK GLIVQGI+IRPK S
Sbjct: 280 EVEMVLKEVNCNYSKCGLIVQGIEIRPKNS 308

[Close]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL
Match: A0A0A0LWS1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 3.83e-145
Identity = 197/199 (98.99%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 101 KSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 160

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFL+NAPPK
Sbjct: 161 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLENAPPK 220

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK
Sbjct: 221 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 280

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPKVSRDLA
Sbjct: 281 SGLIVQGIDIRPKVSRDLA 299

[Close]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL
Match: A0A5A7UXV0 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006450 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 1.52e-137
Identity = 190/199 (95.48%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGARELSIIWSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 101 KSFSLDKWSGKKCIMLGARELSIIWSDMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 160

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLD APPK
Sbjct: 161 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK 220

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRR TPCLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NNGGDD VEFFLKEVNCNYSK
Sbjct: 221 RRR-TPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSK 280

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPK+SRDLA
Sbjct: 281 SGLIVQGIDIRPKISRDLA 298

[Close]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL
Match: A0A1S3BWT7 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 1.52e-137
Identity = 190/199 (95.48%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGARELSIIWSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 101 KSFSLDKWSGKKCIMLGARELSIIWSDMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 160

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLD APPK
Sbjct: 161 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK 220

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRR TPCLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NNGGDD VEFFLKEVNCNYSK
Sbjct: 221 RRR-TPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSK 280

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPK+SRDLA
Sbjct: 281 SGLIVQGIDIRPKISRDLA 298

[Close]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL
Match: A0A5D3CBY5 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00980 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 7.06e-137
Identity = 190/199 (95.48%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGARELSIIWSDMP YWTWEPHPESRFAEVAVLLNVWWLEIKGKL
Sbjct: 145 KSFSLDKWSGKKCIMLGARELSIIWSDMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 204

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLD APPK
Sbjct: 205 SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK 264

Query: 133 RRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSK 192
           RRR TPCLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NNGGDD VEFFLKEVNCNYSK
Sbjct: 265 RRR-TPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSK 324

Query: 193 SGLIVQGIDIRPKVSRDLA 211
           SGLIVQGIDIRPK+SRDLA
Sbjct: 325 SGLIVQGIDIRPKISRDLA 342

[Close]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL
Match: A0A6J1ENM7 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435984 PE=4 SV=1)

HSP 1 Score: 276 bits (705), Expect = 6.53e-90
Identity = 139/210 (66.19%), Postives = 157/210 (74.76%), Query Frame = 0


Query: 13  QSFSLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKL 72
           +SFSLDK SGKKCIMLGAR+L IIW+D P YWTW  HPESRF EVAVLL  WW+E++GK+
Sbjct: 100 KSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISHPESRFGEVAVLLQAWWVELRGKI 159

Query: 73  SCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDNAPPK 132
           SCKMLS ATTYAAYFVFKM+ER YYGFDIV ADA V IV GECC+  V LDP+LDN+  K
Sbjct: 160 SCKMLSAATTYAAYFVFKMNER-YYGFDIVPADAKVGIVGGECCTISVGLDPYLDNSQRK 219

Query: 133 RRR---------------RTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDD 192
           R+R               R    + +  G +MSR   P+ERHDGWFEIE+GE  NNGGDD
Sbjct: 220 RQRLVWMGSNAPGHRQRLRWMGSKTHTPGINMSRMALPKERHDGWFEIEMGEFHNNGGDD 279

Query: 193 VVEFFLKEVNCNYSKSGLIVQGIDIRPKVS 207
            VE  LKEVNCNYSK GLIVQGI+IRPK S
Sbjct: 280 EVEMVLKEVNCNYSKCGLIVQGIEIRPKNS 308

The following BLAST results are available for this feature:

BLAST of Cucsat.G18496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	2.6e-35	43.59	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q6NPT8	2.2e-34	40.27	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q3E6P4	2.7e-32	41.62	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ8	2.3e-31	37.37	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9FLU7	4.3e-30	38.54	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]

BLAST of Cucsat.G18496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146303.1	7.92e-145	98.99	F-box protein PP2-B10 [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_019...	[more]
XP_008453631.1	3.14e-137	95.48	PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058311.1 F-box protein...	[more]
TYK09497.1	1.46e-136	95.48	F-box protein PP2-B10-like [Cucumis melo var. makuwa]	[more]
XP_038878692.1	2.40e-133	92.86	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_022929404.1	1.35e-89	66.19	F-box protein PP2-B10-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G18496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWS1	3.83e-145	98.99	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 ...	[more]
A0A5A7UXV0	1.52e-137	95.48	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BWT7	1.52e-137	95.48	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1	[more]
A0A5D3CBY5	7.06e-137	95.48	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1ENM7	6.53e-90	66.19	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435984 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 12..54 e-value: 5.4E-4 score: 19.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 10..56 score: 8.967582
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..82 e-value: 1.4E-5 score: 27.0
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 9..294
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 9..294
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 111..292 e-value: 9.4E-53 score: 178.2
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18496.T1	Cucsat.G18496.T1	mRNA
Cucsat.G18496.T3	Cucsat.G18496.T3	mRNA
Cucsat.G18496.T2	Cucsat.G18496.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding