Cucsat.G18291 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18291
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	U3 small nucleolar RNA-associated protein 14 homolog A
Location	ctg3345: 4782841 .. 4786668 (-)
RNA-Seq Expression	Cucsat.G18291
Synteny	Cucsat.G18291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGAAGATCGATGAAGCCAGAAAGAGAAGAACATAATGGCTGGTCAAACATGCCATACAGCCTACAAACATGGCTTCTTCTTTGGACCCACTTTTTCCCCACAGATGTCCTCTCCTTATGCCCCCTTCTTTTTGGCCCCCTTAATGCCTTTTAGTCTTCTCAATTTCTCCTCTTTCATCTCCCCATAATCATTTCCCAATTCTTTCTTGCTTTCTAATTCATCAACTTTCAACAAAAATGAAGGTCTTTACATAATGAACAACCTCCAAACACTTTGTATTTTATATCCTCTTGTTATTAGTAGTATTATTCATTCCAGTGCATACTCTTTTCTTGATTGATTAATTTAATCCACCACTTTCTTCTTTTTGTTTCCTTCCTTTTCAGATCTTCAATTGGGTGCACAAGACTTTTCATCATTCTCTTCTCAAGGGTTTAATTTCTCTCATTTTATTGCAATTCTTTCTTCCTTTGGGTGTAGGATATATATTTTTAAAAATACATATCTTAGAGTTATGTTCGAAACATAAATTGAATGCTTGATATTTTTCAGAGGGTTTTGCGCAAAATGCGACGAAGAAGAATGAAAGTGTAAGCATTAATGAAGTGGATAGGCATGCATTGTTGAAGCAAGTAGCGTTTGATCGTGTGGAAGCCATTCATGACTGGAGAGATGGCATTCTCACCATTGGCACATTCGGGTTTGAATCATTGAAACCTTCGAACGAGCAAAAGGAGTATTTCATGCTCGAGAGCGAAGAAGACGACTACGAAGACGAGGAAGAAGAGGAAGAGAAATCGTTCGTTCACGATGAAGATGACGACATTATCGGTTACTTGGAAAACGAAGAACTAAACCCTTTGATGTTGAAAGCATTTGGACACAAATCAAAGGATGTAAGTGCTGAGAAAGGTGAAGATGATTTGATCAAATACAATGCAATTATGGAGATGGAGAATGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATTACACTGGCTGATTTGTTCTTAGCTGATGCAAGAGATGTGGCAAAAGTACTTGAGGATGACAAAGTGCTTCAAAAGAAAACAGCTGATGTGAGAAGTAAGAGTGGTCTCTCCTTTGCCAAGAAGTTTATCCCTCGAGTTAAGGAGGATTCACACCCTATTAAGAACTTTCAACGAGTGAGTAACCTTATTATTATTTTTTATTATTGTAGTCTTGTAAAGTTTTGGGCCAATGGATGATTTAACAAGTTTTTAAAATGAATTTCAAAAAACAAGTGTTTGTCTGCAAGTTGCTAAAATCTGATAACGACATTCACTTGGAAATTTGTGTTACGCCACTAAGTTGGGTGAGAAAAAATTGGGTATAGGAGAGCCTAATTAGCCGACAAAGTATTTTTGTGATAGAATTACTAAAATTGTTGTGATTTTGGGAGATGCAGGTTGAAAAAATATTCACCATTTAAAACAAAATTTCAATTTTTTAAACATTCTTAATTGGAAAATGGAGAGTTTATGTTGTTATAAATTCAAAAAAATCACACCAAACACAAAAAGGAATGGTGTAAAAATTAATCCAAAACTTAAATCTTGAAAGATAAAAAGATGGCAACAAAAGCAACCTGAAAATAAAATGATGAATCCATAAGTACAAAACATGCATGTTGGTATTGTTTATAGAAAAGAAGAAAGTAGAATTTATGAAAGAAACAACAAAAAGGAAATTTAAAAAGAAAGAGAGAGAGAAGAAATCATTGAGTTGTTGTATGATTGGGATGCCACGTGTACGTTATGCAGTTGATGAGAAGGATGATGAAGAGGAAGATCCATCCAGAGATTGAAGACAAGGTCATCATCAACAAACCATCATCGTCTGACCTAACAACTCACCAAATAGGAATAATCCCCAACAATGGACCTTTTCAATCCTTTGAATCCATCTCTCTTCTTCCAACTCAAGGTAATTTTTACTTTTTTTTTTTTTTATTATTATTATCTTCTCCTTTTCTTTCTTTCCATGAAATAAGAAAAATTATGAACGTTTCTATACTGAAGTTTCCAACTTAAGTTAGTTAAAGGTTATCCAGCCTAGCTAGGGTTTATTTTATCATTTTAGTTATGTTTGTTTGGTAAGCGTTTTATTTAAAGAACTTTTCACTTTTAAGTTTATTGTTTTGAAATCTACTTCTGGTTCATGTATTCAAAATTTTGAAAACTAAAAATAAAGAATTTTTAAAAACAATTTAACTACATACTCATCACTTCGATTATAAATTTTATCTTTTTCAACTTAATTGACTAAGTGATAAAAACGTCCCTTTTTAAAAATTTTAAATTTTGGTTTGATTTTTAAAAACATAACAAAAAGAAAGAAACTAATTATGGGTGAAAAGTTTTAATTTTAAAAAAAAAAATCAAAAACAAAAAATTAAACCTTTATCTAAGTAGATGATCACGTAGATATGTTGAATTGGACACGTTGATTTCTTGAATTAGACTAAAAGGTCAAATCCATCCTAAAGTGTCAAAAACATGGTAGAAATTGAAAAGATGAGAAATGAAAAACAATCAAACCCATCAAAATTGAGTCAATTCTGTGTCTATTTGTCTTTAATAATTACCCAATTCTATCCTATTTTCAAATAACTTTAGAGAACCATAATACAATTGGTTCATTTGATTACAGCTATTTCAACTTTAGTTTTAACCCAAAATCAAATTATATGGATTCACCTAACACTGAAATTTTCACTATGCCAACAACCCTAGCATAGGGTATATCATGGTGAGACTACAAGTGTTCAATGTAGGCCCTAAAAAACATTTGAATAATTTTATCAACTTTTCTCAATTGGACAAATTTCAATCAAAGCTGTATATGGTCAAATGGGATTATTGAAGATTAAACTTGCATATCACATACAGAAAAGTGTCATTATTACTGTCCTTGTATTTTATCCATGTGACATTTGAAATTTAATGGGCCATTTCATCGCAAACAACACAAAAGCAAATTCCAAGTAAGAAACAGTCAAACAAATCAGTCACAAATCTTTTCCTCTGTCATACAATTCTGGCTATTAATTAAATATCGCAAACTCATCTAATCTGGTGGGCTCTCACATGTCTAATCCACTCATACTTCATGCTATTTGATACAGATATATATGTGAATTATTTAGGTTCCCAAAGTCTATTTTTCTTCACATTCTTAAATACATTGTTCTTAAACCCAAGCAAAAACAAGTTTTTGACTGCATCTTCTTTTGACAACTAAGTATAAACGAAAAATTAAATATAATGGTTCAGAAACGAGGTCTTATTTGAATACTCATTTTGGATTGACTTTTTGCTGCTTTAAGTAATCTTTGTTTTACTATTTCTCTTAAGTGTAATTAGAAAATGCCTCCTTATAATGGGGAATTATTATATACATAGCAAAAAGAAACTAGTAAAAAAAAAAATTCAAATGAGAGAGTGTGTGATGGATTTTAATTACTATATTTTTTAAAATTGTTTCAATATTATATTTTACTATTATAAGTTTGTTTTTGTTTAGTCACTAATTGGTTTTTTTCTTTCTAATTTGGTGTGTTTACTTAGGTGCAGATGCAATTGCGTGATGGATTTAATGGATGGATGTATTTGAAATTAATGAGTTGTGTTTAATTATCTCTTATGGTAATTTGTTGAAAACAATGTTTATTTATTATTTTTGTTCATTAGGTGTTTATTGTATATGGAGCTTTTTAATTAAGACTACTTGTAAGTTGTAAGTTGTTTTGATGTTGTTTTTGGGTTTAGCAAACAAAGTCGTGGAATTGTGGTTTGTGGGTCAGTTCTTGGCGTTTCTCTACTTCCTCAAATTTATTCATTTCCAATCAATATATCTTCACATTATTTATTT

Coding sequence (CDS)

ATGAAGATCTTCAATTGGGTGCACAAGACTTTTCATCATTCTCTTCTCAAGGAGGGTTTTGCGCAAAATGCGACGAAGAAGAATGAAAGTGTAAGCATTAATGAAGTGGATAGGCATGCATTGTTGAAGCAAGTAGCGTTTGATCGTGTGGAAGCCATTCATGACTGGAGAGATGGCATTCTCACCATTGGCACATTCGGGTTTGAATCATTGAAACCTTCGAACGAGCAAAAGGAGTATTTCATGCTCGAGAGCGAAGAAGACGACTACGAAGACGAGGAAGAAGAGGAAGAGAAATCGTTCGTTCACGATGAAGATGACGACATTATCGGTTACTTGGAAAACGAAGAACTAAACCCTTTGATGTTGAAAGCATTTGGACACAAATCAAAGGATGTAAGTGCTGAGAAAGGTGAAGATGATTTGATCAAATACAATGCAATTATGGAGATGGAGAATGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATTACACTGGCTGATTTGTTCTTAGCTGATGCAAGAGATGTGGCAAAAGTACTTGAGGATGACAAAGTGCTTCAAAAGAAAACAGCTGATGTGAGAAGTAAGAGTGGTCTCTCCTTTGCCAAGAAGTTTATCCCTCGAGTTAAGGAGGATTCACACCCTATTAAGAACTTTCAACGATTGATGAGAAGGATGATGAAGAGGAAGATCCATCCAGAGATTGAAGACAAGGTCATCATCAACAAACCATCATCGTCTGACCTAACAACTCACCAAATAGGAATAATCCCCAACAATGGACCTTTTCAATCCTTTGAATCCATCTCTCTTCTTCCAACTCAAGGTGCAGATGCAATTGCGTGA

Protein sequence

MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGILTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA

Homology

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BLAST of Cucsat.G18291 vs. ExPASy Swiss-Prot
Match: U3MMQ4 (Protein TILLER ANGLE CONTROL 1 OS=Prunus persica OX=3760 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-52
Identity = 132/304 (43.42%), Postives = 177/304 (58.22%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHK  H  ++K+GFA N   K   +  N+ D  A LKQV    V+ +  WRDGI
Sbjct: 1   MKIFNWVHKRLHQRVVKDGFAGNV--KKSELETNDKDTQAFLKQVGLVNVDGLDGWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGY-LENEELN 120
           LTIGTFGF+ LKPS  Q EYF+LESEEDD E        +   D+DD+   + +E+EELN
Sbjct: 61  LTIGTFGFDPLKPSTHQNEYFVLESEEDDQESHGFSHSGNDDDDDDDEHYDHSVEDEELN 120

Query: 121 PLMLKAFGHKSKDVSA------EKGEDDLIKYNAIM---------------EMENEEEKK 180
           PLM   F H  +D+ +      +K  D ++  + +                +  N++ K 
Sbjct: 121 PLMFTTFEHSFEDIGSNFDAIVQKPADVILTVDGVPLTPFEGSSEISTKPDQSANDQSKN 180

Query: 181 KGERRITLADLFLADARDVAKVLEDDKVLQ---KKTADVRSKSGLSFAKKFIPRVKEDSH 240
           K  +RITLADLF AD  DV ++  D   +Q   +K  + R++SGL+FAKK IPRVK+DS 
Sbjct: 181 KKGQRITLADLFQADVPDVGQLKLDSGKVQPEMEKKMNARTRSGLAFAKKLIPRVKDDSS 240

Query: 241 PIKNFQRLMRRMMKRKIHP-EIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLP 279
           PIKN QRLMRRM+KRKIHP E+E K+  +           I  + N+    ++ES+SLLP
Sbjct: 241 PIKNMQRLMRRMLKRKIHPAELEVKIHKSDGQKQPSAVELISNVEND----AYESVSLLP 298

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BLAST of Cucsat.G18291 vs. ExPASy Swiss-Prot
Match: F4IJ79 (Protein TILLER ANGLE CONTROL 1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.7e-14
Identity = 89/311 (28.62%), Postives = 144/311 (46.30%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKE--GFAQNATKK-NESVSINEVDRHALLKQVAFDRVEAIHDWR 60
           M IFNWV K  H +++KE  G  +N  KK NE +S  E +  A+L QV    V+A+ +W 
Sbjct: 1   MTIFNWVQKKLHQNVIKEIDGVRKNEKKKRNEGISEIEKNTKAILDQVGL--VDALDNWF 60

Query: 61  DGILTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEE 120
           DG+LTIGTFGF++L              EED+ +D+E           D  II  ++ +E
Sbjct: 61  DGVLTIGTFGFDTLN-----------FKEEDEMDDDECGSGDLDYVVIDGSIIKNVD-QE 120

Query: 121 LNPLML--KAFGHKSKDVSAEKGEDDLIKYNAIMEMEN-------EEEKKKGERRITLAD 180
            +PL+     F    +DV     + D   + +I   E        E E +  ++R TLA+
Sbjct: 121 SDPLISVENKFYDHHEDVGNLYVQADTDHFGSIKTAETPAVTAAAEAEIEPQKKRTTLAE 180

Query: 181 LFL-------------------ADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPR 240
           LF+                    D  +V    ++   L K+ + V+ K  +S +K+    
Sbjct: 181 LFMEDHDKGYDTWHCKKPNNPNLDGEEVKYYKQNGSKLSKRFSFVKKKLVMSKSKE---- 240

Query: 241 VKEDSHPIKNFQRLMRRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFES 281
            + D  PIK  +++++RM+K+KIHP+++    + K      T +           ++ ES
Sbjct: 241 EENDLRPIKKMRQMIKRMLKKKIHPDVDATKALKKDVPYKPTRN----------CEALES 283

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BLAST of Cucsat.G18291 vs. NCBI nr
Match: XP_011656860.1 (uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus])

HSP 1 Score: 533 bits (1374), Expect = 1.08e-190
Identity = 278/280 (99.29%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280

[Close]

BLAST of Cucsat.G18291 vs. NCBI nr
Match: XP_004140615.1 (uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KGN46544.1 hypothetical protein Csa_005546 [Cucumis sativus])

HSP 1 Score: 528 bits (1361), Expect = 1.12e-188
Identity = 278/282 (98.58%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ--DAIA 280
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ  DAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 282

[Close]

BLAST of Cucsat.G18291 vs. NCBI nr
Match: XP_008459743.1 (PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo])

HSP 1 Score: 510 bits (1313), Expect = 2.00e-181
Identity = 268/280 (95.71%), Postives = 271/280 (96.79%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQ+ATKKNESV INEVDRHALLKQVAFD VEAIHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEYF LESEEDDYEDEEEEE KSFVHDEDDDIIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFALESEEDDYEDEEEEE-KSFVHDEDDDIIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LM KAFGHKSKDVS EKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAK 
Sbjct: 121 LMFKAFGHKSKDVSVEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKA 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPE+EDK+
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEVEDKI 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           IINKPSS DL THQIGIIPNNGPFQSFESISLLPTQDAIA
Sbjct: 241 IINKPSS-DLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of Cucsat.G18291 vs. NCBI nr
Match: XP_038875598.1 (protein TILLER ANGLE CONTROL 1 [Benincasa hispida])

HSP 1 Score: 442 bits (1138), Expect = 9.84e-155
Identity = 240/284 (84.51%), Postives = 256/284 (90.14%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+LLKEGFAQN TKKNES  INEVDRHALLKQV FD VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTLLKEGFAQNGTKKNESSGINEVDRHALLKQVEFDHVETLHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEY +LESEEDDYED+EEEEEKS V+DEDDDIIGYLE+EELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYLVLESEEDDYEDKEEEEEKSLVNDEDDDIIGYLEDEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLI-----KYNAIMEMENEEEKKKGERRITLADLFLADAR 180
           LM  AFGHKSKDV  EKGED +I     KY+ IMEMENEE+KKKGERRITLADLFLADAR
Sbjct: 121 LMFTAFGHKSKDVCVEKGEDLIIGAYESKYSGIMEMENEEKKKKGERRITLADLFLADAR 180

Query: 181 DVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPE 240
           DVAK LEDDKVLQKKTADVRSKSGLSFAKK IPRVKEDSHPIKNFQRLMRRM+K+KIHPE
Sbjct: 181 DVAKALEDDKVLQKKTADVRSKSGLSFAKKLIPRVKEDSHPIKNFQRLMRRMLKKKIHPE 240

Query: 241 IEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAI 279
           IEDK  INK +S DLT HQIG+ PNNG F++FES+SLLPTQDAI
Sbjct: 241 IEDK--INK-ASPDLT-HQIGM-PNNGGFETFESLSLLPTQDAI 279

[Close]

BLAST of Cucsat.G18291 vs. NCBI nr
Match: XP_022958918.1 (adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058.1 adoMet-dependent rRNA methyltransferase SPB1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (988), Expect = 9.16e-132
Identity = 215/294 (73.13%), Postives = 242/294 (82.31%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEE---KSFVHDEDDDIIGYLENEE 120
           LTIGTFGFESLKPSN+Q EY +L+SE+DD E+EEEEEE   KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120

Query: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180

Query: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240

Query: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIGT-PNHEGFEGFEALSLLPIQDAVA 289

[Close]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL
Match: A0A0A0KCK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 5.41e-189
Identity = 278/282 (98.58%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ--DAIA 280
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ  DAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 282

[Close]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL
Match: A0A1S3CAZ2 (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 GN=LOC103498785 PE=4 SV=1)

HSP 1 Score: 510 bits (1313), Expect = 9.67e-182
Identity = 268/280 (95.71%), Postives = 271/280 (96.79%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQ+ATKKNESV INEVDRHALLKQVAFD VEAIHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNP 120
           LTIGTFGFESLKPSNEQKEYF LESEEDDYEDEEEEE KSFVHDEDDDIIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFALESEEDDYEDEEEEE-KSFVHDEDDDIIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LM KAFGHKSKDVS EKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAK 
Sbjct: 121 LMFKAFGHKSKDVSVEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKA 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPE+EDK+
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEVEDKI 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           IINKPSS DL THQIGIIPNNGPFQSFESISLLPTQDAIA
Sbjct: 241 IINKPSS-DLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL
Match: A0A6J1H4F7 (adoMet-dependent rRNA methyltransferase SPB1 OS=Cucurbita moschata OX=3662 GN=LOC111460066 PE=4 SV=1)

HSP 1 Score: 385 bits (988), Expect = 4.43e-132
Identity = 215/294 (73.13%), Postives = 242/294 (82.31%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEE---KSFVHDEDDDIIGYLENEE 120
           LTIGTFGFESLKPSN+Q EY +L+SE+DD E+EEEEEE   KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120

Query: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180

Query: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240

Query: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIGT-PNHEGFEGFEALSLLPIQDAVA 289

[Close]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL
Match: A0A6J1L2P4 (eukaryotic translation initiation factor 5B OS=Cucurbita maxima OX=3661 GN=LOC111499297 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 3.18e-130
Identity = 213/296 (71.96%), Postives = 242/296 (81.76%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEQKEYFMLESE-----EDDYEDEEEEEEKSFVHDEDDDIIGYLEN 120
           LTIGTFGFESLKPSN+Q EY +L+SE     E++ E+EEEEEEKSFVH+ED+D I ++++
Sbjct: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDNEEEEEEEEEEEEEEEKSFVHEEDNDSIDFVDD 120

Query: 121 EELNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180
           EELNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRI
Sbjct: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRI 180

Query: 181 TLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240
           TLADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240

Query: 241 RRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280
           RRM+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 RRMLKRKIHPEIEDK--INKASSSD-QTHQIGT-PNHEGFEGFEALSLLPIQDAVA 291

[Close]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL
Match: A0A5D3DMJ7 (U3 small nucleolar RNA-associated protein 14-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003040 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 2.51e-127
Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 18  EGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGILTIGTFGFESLKPSNEQ 77
           +GFAQ+ATKKNESV INEVDRHALLKQVAFD VEAIHDWRDGILTIGTFGFESLKPSNEQ
Sbjct: 3   KGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGILTIGTFGFESLKPSNEQ 62

Query: 78  KEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKSKDVSAEK 137
           KEYF LESEEDDYEDEEEEE KSFVHDEDDDIIGYLENEELNPLM KAFGHKSKDVS EK
Sbjct: 63  KEYFALESEEDDYEDEEEEE-KSFVHDEDDDIIGYLENEELNPLMFKAFGHKSKDVSVEK 122

Query: 138 GEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKVLEDDKVLQKKTADVRSK 197
           GEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAK LEDDKVLQKKTADVRSK
Sbjct: 123 GEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKALEDDKVLQKKTADVRSK 182

Query: 198 SGLSFAKKFIPRVKEDSHPIKNFQRL 223
           SGLSFAKKFIPRVKEDSHPIKNFQR+
Sbjct: 183 SGLSFAKKFIPRVKEDSHPIKNFQRV 207

The following BLAST results are available for this feature:

BLAST of Cucsat.G18291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
U3MMQ4	6.9e-52	43.42	Protein TILLER ANGLE CONTROL 1 OS=Prunus persica OX=3760 GN=TAC1 PE=2 SV=1	[more]
F4IJ79	5.7e-14	28.62	Protein TILLER ANGLE CONTROL 1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of Cucsat.G18291 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656860.1	1.08e-190	99.29	uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus]	[more]
XP_004140615.1	1.12e-188	98.58	uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KGN46544.1 hy...	[more]
XP_008459743.1	2.00e-181	95.71	PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo]	[more]
XP_038875598.1	9.84e-155	84.51	protein TILLER ANGLE CONTROL 1 [Benincasa hispida]	[more]
XP_022958918.1	9.16e-132	73.13	adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058....	[more]

BLAST of Cucsat.G18291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCK2	5.41e-189	98.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1	[more]
A0A1S3CAZ2	9.67e-182	95.71	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 G...	[more]
A0A6J1H4F7	4.43e-132	73.13	adoMet-dependent rRNA methyltransferase SPB1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1L2P4	3.18e-130	71.96	eukaryotic translation initiation factor 5B OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3DMJ7	2.51e-127	95.15	U3 small nucleolar RNA-associated protein 14-like protein A OS=Cucumis melo var....	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
IPR044989	Protein TILLER ANGLE CONTROL 1	PANTHER	PTHR38366	NAD-DEPENDENT PROTEIN DEACETYLASE HST1-LIKE PROTEIN	coord: 2..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18291.T1	Cucsat.G18291.T1	mRNA
Cucsat.G18291.T3	Cucsat.G18291.T3	mRNA
Cucsat.G18291.T2	Cucsat.G18291.T2	mRNA
Cucsat.G18291.T4	Cucsat.G18291.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0001763	morphogenesis of a branching structure
biological_process	GO:0006413	translational initiation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity