Cucsat.G18282 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18282
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	cell number regulator 6
Location	ctg3345: 4685626 .. 4687991 (-)
RNA-Seq Expression	Cucsat.G18282
Synteny	Cucsat.G18282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTTTAATTTAGAAACCTTTTGGTGAAGCCTGTTAAAAATTTCTTACTGATCTTAAAAACTCAACCCTTCTCTGCAAAAATCTAACGAACAAAGCATTAGTTAATAAAATTTTGGGGGTTATTTAGGCCAATTTTGAATGGGACTTTTATGATTTCAAGCAATTGGGAATCTCAAAATGATAAGGATTACCAAAATTGCAAAAGGGTTTCATTCATATATATCAATGATTTAATGTTATGATTAACTAAGATCCAGGTTGAGATTTTGTAGATTTGTTTTAATTTTTGGGTGAAATAATATAATTATGGCAGAGGGGAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGGTTTTTTTTTTTCCTCTCTTTTTCATTTTCGTTTGATTACCAAGTTTATTTCGTTCATGTCGATTAGGTCTTAAGATTCTTTAGCTTTTGCTTTTGTGTGTGAAAATTTTGAAATTTTGTATCCAATAAAGTTCTTAACGTATTCAACATTTTTTATTCGGTGTGTTTGCACACTTTTTTCTGCTTTTATTAAAAAGAAAAATTTTGGTTTTGGATTATGACGAGAGTGTTAGAAGATGTCGACTTAGTTGAGATAACATATATTGATGAAGGTTATAATTAAAAAGAAGAATTCAATATTTTTATTAATTTTGTGTCCAAACGGATTTGTAAACTTTAAGAAGGGAGTTGAATTGGTCGAGAGCTTATTATACAAAACTATTTCTATATTTTGTGTATGTTGCTCTTAATTATAGAATAAAGAGATAACACGTCACATCGTTTATTAAATCATGTAACTCTGTATGCAGATATTTACTTGTTAATTGTTACTGATGTAACAATATTTTTTTTGGGTACAAACACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGTAAGAACTTTCAAACACTTTTATTTTTTCTTGTAAGTGGTTAGTTAATTGATCCAAATAAATCCTTAATCGAAAAATGAATAAAATACTTATTTTGAAAATGAATGATATACAGGATATGAATTATGAATTAAATTAATTGTTCAGGCTGATGTATTAAATTTTCTCTTTTTCATCATTATGATGTATTTACTATTTTGTTCAACTTGAAGAAAGTCTCTCAGTATTTCTTTTTTTACATCAATGCATGTATTTCGAGTACTTTTTTTTATATCAATGCATATATTTTTTATATAAATGGTATATGATGAGAGTACTACGAAAGTATTTAAGATGTTAGGGCGCACTACTTGCTAATTTCGTAACGTTTGTACTACTACTAGGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTCGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGGTTAGTTCGATGACCATTTTTTTTATGTTTATTTTCTTACTTGATAGAGTACTTAATCTTATTAAAATATATATAAGATTTCCTATATATTTATATGTTTCTTTTTTTTTTCTTGTAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAGAGATCTATTTGGTGTGGAGAGCTAGAAAAATATATTTTATAAGGAATGATCATATATATTTTAGAATGACTATTAATTAGAAAGAAAACTTTTAAAAACTAATCTCCAACTCTCTGTTTTTAGTATAGCTTACTGAATCAATATATGAAAAATGTAGTTAGCGGTATTTATGTATTCTCATTTGGGCACTATTCTAATATATGGGTCTTTGAAATTTCCTTTTATTTGATGTAATTGCTTTTTATTTGGTGCAGTGTTCTTCCTTGCACTAATTAACCAGTTGATTTTCAGGTTTATAGAAACAAAAAACACTGATTTG

Coding sequence (CDS)

ATGGCAGAGGGGAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTCGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAG

Protein sequence

MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADEDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI

Homology

[Close]

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot
Match: B6SGC5 (Cell number regulator 6 OS=Zea mays OX=4577 GN=CNR6 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.7e-86
Identity = 139/218 (63.76%), Postives = 168/218 (77.06%), Query Frame = 0


Query: 2   AEGSAQSRYVRLTKDQ-GPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 61
           A  S  SRYV+LTKDQ  P EDI PGELNQP+ VPQL   RC ECGQ LPESY+PPADE 
Sbjct: 5   ATSSHPSRYVKLTKDQDAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEP 64

Query: 62  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 121
           WTTGI GC  D  TC  G+ CPCVLFG NVE +RE+IPW   CVCHA+ VEGG+ +A  T
Sbjct: 65  WTTGIFGCTDDPETCRTGLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILT 124

Query: 122 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 181
           A+FHG+DP+TSFLI E L+F+WW+C  YTG+FRQ LQ+KYHLKNSPCDPC+VHCC+HWCA
Sbjct: 125 AIFHGVDPRTSFLIGEGLVFSWWLCATYTGIFRQGLQRKYHLKNSPCDPCMVHCCLHWCA 184

Query: 182 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE 219
            CQE+RE    L++N  + MTV++PP +Q M+  ++ E
Sbjct: 185 NCQEHRERTGRLAENNAVPMTVVNPPPVQEMSMLEEVE 222

[Close]

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W++GIC CF D+ +C  G+ CPC +FG+N E L     +   C+ H  C+   +      
Sbjct: 47  WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFAGPCLTH--CISWALVNTICC 106

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
              +G     + L       + + CG     +R+SL+ KY+L+ +PC   + H   H CA
Sbjct: 107 FATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHLCA 166

Query: 181 LCQENREMRNHLSDN--ITMQMTVIDPPALQAMNT 214
           +CQE RE+R   S +  + M+M + + P  Q M +
Sbjct: 167 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTMES 188

[Close]

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.7e-15
Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 0


Query: 43  EECGQPLPESYQPPADEDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNA 102
           EE     P+  Q P    W++GIC CF D  +C  G +CPC LFG+N + L        +
Sbjct: 29  EENHATRPKLNQDPT--QWSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSG-TLAGS 88

Query: 103 CVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHL 162
           C  H  C+  G+  +       G+      L       A + CG     +R +L+ KY+L
Sbjct: 89  CTTH--CMLWGLLTSLCCVFTGGL-----VLAVPGSAVACYACG-----YRSALRTKYNL 148

Query: 163 KNSPCDPCLVHCCMHWCALCQENREMRNHLSDNITMQMTVIDPP 207
             +PC     H   H CA+CQE RE+R       +    V  PP
Sbjct: 149 PEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSPAPNVTPPP 177

[Close]

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W+TG+C CF D   C    +CPC+ FG+  E +                  G  +   + 
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIID----------------RGSTSCGTSG 106

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           AL+           +  +L     C +Y+  +R  ++ +Y L+ SPC  C VHCC   CA
Sbjct: 107 ALY-----------ALVMLLTGCQC-VYSCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCA 147

Query: 181 LCQENREMR 190
           LCQE RE++
Sbjct: 167 LCQEYRELK 147

[Close]

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot
Match: D9HP20 (Cell number regulator 4 OS=Zea mays OX=4577 GN=CNR4 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13
Identity = 44/144 (30.56%), Postives = 63/144 (43.75%), Query Frame = 0


Query: 52  SYQPPADEDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQN-ACVCHAMCV 111
           S  PP   +WTTG+CGCF D  +C    LCPC+ FG+  E L + +     A + + + +
Sbjct: 2   STYPPPTGEWTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVLDKGMTSCGLAGLLYCLLL 61

Query: 112 EGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPC 171
             G+AV                              IYT  +R+ L+  Y L   PC  C
Sbjct: 62  HAGVAVVPCHC-------------------------IYTCTYRRKLRAAYDLPPEPCADC 120

Query: 172 LVHCCMHWCALCQENREMRNHLSD 195
            VH     CA+ Q  RE++N  +D
Sbjct: 122 CVHMWCGPCAISQMYRELKNRGAD 120

[Close]

BLAST of Cucsat.G18282 vs. NCBI nr
Match: XP_004140611.1 (cell number regulator 6 [Cucumis sativus] >KGN46557.1 hypothetical protein Csa_005381 [Cucumis sativus])

HSP 1 Score: 510 bits (1313), Expect = 7.16e-183
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE PPSSSVVPSQELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of Cucsat.G18282 vs. NCBI nr
Match: XP_008460181.1 (PREDICTED: cell number regulator 6 [Cucumis melo])

HSP 1 Score: 497 bits (1280), Expect = 7.72e-178
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 236

[Close]

BLAST of Cucsat.G18282 vs. NCBI nr
Match: TYK24757.1 (cell number regulator 6 [Cucumis melo var. makuwa])

HSP 1 Score: 486 bits (1251), Expect = 1.83e-173
Identity = 224/236 (94.92%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQ   LIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQ---LIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 233

[Close]

BLAST of Cucsat.G18282 vs. NCBI nr
Match: XP_038906490.1 (cell number regulator 6 [Benincasa hispida])

HSP 1 Score: 477 bits (1228), Expect = 6.81e-170
Identity = 219/237 (92.41%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTK-DQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           MA+G+ QSRYVRLTK DQ PLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE
Sbjct: 1   MADGNTQSRYVRLTKADQAPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60

Query: 61  DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           DWTTGICGC +D  TCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA
Sbjct: 61  DWTTGICGCLEDTKTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120

Query: 121 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
           TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC
Sbjct: 121 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180

Query: 181 ALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           ALCQENREMRNHLSDN+TMQMTVI+PPALQ MNTN+D+E  PSSS +PSQELAITPI
Sbjct: 181 ALCQENREMRNHLSDNVTMQMTVINPPALQEMNTNNDDEYAPSSSSMPSQELAITPI 237

[Close]

BLAST of Cucsat.G18282 vs. NCBI nr
Match: XP_023514315.1 (cell number regulator 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458 bits (1178), Expect = 2.66e-162
Identity = 210/236 (88.98%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           M +G+ QSRYVRLTKDQ PLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MGDGNMQSRYVRLTKDQAPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  +CWRGMLCPCVLFGENVETL+EEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDTQSCWRGMLCPCVLFGENVETLKEEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           AL HGIDPQTSFLISE+LLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALIHGIDPQTSFLISESLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQE+REMRNHLSDN+ MQMTVI PPALQAMN +  NE  PS+S +PSQELAIT I
Sbjct: 181 LCQEHREMRNHLSDNVAMQMTVISPPALQAMNIHQ-NESAPSTSSLPSQELAITTI 235

[Close]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL
Match: A0A0A0KDV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108550 PE=4 SV=1)

HSP 1 Score: 510 bits (1313), Expect = 3.47e-183
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE PPSSSVVPSQELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL
Match: A0A1S3CBY6 (cell number regulator 6 OS=Cucumis melo OX=3656 GN=LOC103499066 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 3.74e-178
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 236

[Close]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL
Match: A0A5D3DM99 (Cell number regulator 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003200 PE=4 SV=1)

HSP 1 Score: 486 bits (1251), Expect = 8.86e-174
Identity = 224/236 (94.92%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQ   LIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQ---LIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 233

[Close]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL
Match: A0A6J1HNK1 (cell number regulator 6-like OS=Cucurbita moschata OX=3662 GN=LOC111464544 PE=4 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 1.06e-161
Identity = 209/236 (88.56%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           M +G+ QSRYVRLTKDQ PLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MGDGNMQSRYVRLTKDQAPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  +CWRGMLCPCVLFGENVETL+EEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDTQSCWRGMLCPCVLFGENVETLKEEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           AL HGIDPQTSFLISE+LLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALIHGIDPQTSFLISESLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQE+REMRNHLSD++ MQMTVI PPALQAMN +  NE  PS+S +PSQELAIT I
Sbjct: 181 LCQEHREMRNHLSDHVAMQMTVISPPALQAMNIHH-NESAPSTSSLPSQELAITTI 235

[Close]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL
Match: A0A6J1KJB6 (cell number regulator 6-like OS=Cucurbita maxima OX=3661 GN=LOC111494527 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 4.31e-161
Identity = 209/236 (88.56%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           M +G+ QSRYVRLTKDQ PLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MGDGNMQSRYVRLTKDQAPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGI GC QD  +CWRGMLCPCVLFGENVETL+EEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGIFGCLQDTQSCWRGMLCPCVLFGENVETLKEEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           AL HGIDPQTSFLISE+LLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALIHGIDPQTSFLISESLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 236
           LCQE+REMRNHLSD++ MQMTVI PPALQAMNT+  NE  PS+S +PSQELAIT I
Sbjct: 181 LCQEHREMRNHLSDHVAMQMTVISPPALQAMNTHQ-NESAPSTSSLPSQELAITTI 235

The following BLAST results are available for this feature:

BLAST of Cucsat.G18282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6SGC5	4.7e-86	63.76	Cell number regulator 6 OS=Zea mays OX=4577 GN=CNR6 PE=2 SV=1	[more]
Q8S8T8	1.4e-16	30.97	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=...	[more]
B4FF80	5.7e-15	31.10	Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1	[more]
B6TYV8	1.4e-13	30.23	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]
D9HP20	2.4e-13	30.56	Cell number regulator 4 OS=Zea mays OX=4577 GN=CNR4 PE=2 SV=1	[more]

BLAST of Cucsat.G18282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140611.1	7.16e-183	99.58	cell number regulator 6 [Cucumis sativus] >KGN46557.1 hypothetical protein Csa_0...	[more]
XP_008460181.1	7.72e-178	96.19	PREDICTED: cell number regulator 6 [Cucumis melo]	[more]
TYK24757.1	1.83e-173	94.92	cell number regulator 6 [Cucumis melo var. makuwa]	[more]
XP_038906490.1	6.81e-170	92.41	cell number regulator 6 [Benincasa hispida]	[more]
XP_023514315.1	2.66e-162	88.98	cell number regulator 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G18282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV6	3.47e-183	99.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108550 PE=4 SV=1	[more]
A0A1S3CBY6	3.74e-178	96.19	cell number regulator 6 OS=Cucumis melo OX=3656 GN=LOC103499066 PE=4 SV=1	[more]
A0A5D3DM99	8.86e-174	94.92	Cell number regulator 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HNK1	1.06e-161	88.56	cell number regulator 6-like OS=Cucurbita moschata OX=3662 GN=LOC111464544 PE=4 ...	[more]
A0A6J1KJB6	4.31e-161	88.56	cell number regulator 6-like OS=Cucurbita maxima OX=3661 GN=LOC111494527 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 61..187 e-value: 2.5E-25 score: 89.1
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 60..189 e-value: 3.6E-32 score: 109.2
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 7..219
None	No IPR available	PANTHER	PTHR15907:SF119	CELL NUMBER REGULATOR-LIKE PROTEIN	coord: 7..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18282.T1	Cucsat.G18282.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane